LOCUS LC230164 2394 bp mRNA linear INV 10-JAN-2019
DEFINITION Daphnia magna Vrille mRNA for bZIP transcription factor, complete
cds, strain: NIES.
ACCESSION LC230164
VERSION LC230164.1
KEYWORDS .
SOURCE Daphnia magna
ORGANISM Daphnia magna
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae;
Daphnia.
REFERENCE 1 (bases 1 to 2394)
AUTHORS Watanabe,H., Ishak,N. and Kato,Y.
TITLE Direct Submission
JOURNAL Submitted (06-APR-2017) to the DDBJ/EMBL/GenBank databases.
Contact:Hajime Watanabe
Osaka University, Department of Biotechnology, Graduate School of
Engineering; Yamadaoka 2-1, Suita-shi, Osaka 565-0871, Japan
REFERENCE 2
AUTHORS Ishak,N.S.M., Nong,Q.D., Matsuura,T., Kato,Y. and Watanabe,H.
TITLE Co-option of the bZIP transcription factor Vrille as the activator
of Doublesex1 in environmental sex determination of the crustacean
Daphnia magna
JOURNAL PLoS Genet. 13, e1006953 (2017)
REMARK Publication Status: Online-Only
DOI:10.1371/journal.pgen.1006953
COMMENT
FEATURES Location/Qualifiers
source 1..2394
/db_xref="taxon:35525"
/mol_type="mRNA"
/organism="Daphnia magna"
/strain="NIES"
CDS 1..2394
/codon_start=1
/gene="Vrille"
/product="bZIP transcription factor"
/protein_id="BAX77792.1"
/transl_table=1
/translation="MVTENHSHQHSQQIQHQHAQRNGRYLQQTPSHHQDAHEERAMVI
QQHPASIPMSGEPPRNGSSANSQQHANSVSHLNAAMEERAVALQAAAAVAAAVTGFNS
ANLSVGMDLSGLVPVGLMNHLQHNNEQQQHNSPNNNNNNNSNSNQQRKQREFIPDNKK
DDSYWDRRRRNNEAAKRSREKRRLNDMVLESRVLELTKDNHILRAQLSAVRDKYGINP
DALVSIDQVLATLPSPDQVLSLPRPRSRLLSGMSPSLGSGRGGGSVSPSPSNRSLSPP
MSQQSQMHSHQPHHQPNQHQQQRQSVLMSMNRAHRSPSPVAVGPGQGSGSASMQQQHS
YASGHHHQQHHQHGFRYQPAGELAGTGGNHAYQHQQQHQHAQHSQPIKTQQRVLERSL
PPLPALTPVPVISPNHQLEMGGSSVEGAHQHPLPGADRVGSNGNVAPVAAFFDLCSSS
SSSSSSSSSSHPGSSSGDDGSHSPIDPAVAAGRVLPLKLRHKTHLGERDVAAATASAA
AVLLTLNEIKHEPEGIEDSPSAVDSAVDSVSAEMNNNSMSDHHSQVHHHGLHHHANHL
SHHHHQQQPQQQSHQNAQQHQQLQHPHHQHHLNSSGRRSTESSDDRDSGISSGGDWSL
SRSSSRFSSSSSGSNASVSAIGSNNGNIVGHLYHAHHQHQPASKRMRMSPNSPVVDHQ
HQNEHPHMQHQQAVQRRFTAARASQQQQQQVMNNQEVDEEENDPASGIVHERLVLVGG
NESSDENNDELRSHIARLASELESLKTMMLGGGGTSAAGSASTIRNCKSSSTNFRLH"
BASE COUNT 616 a 726 c 602 g 450 t
ORIGIN
1 atggtgactg agaatcattc acatcagcat tctcagcaga tccagcacca gcacgcacag
61 cgcaacgggc gctatttgca gcagacgcca tcacaccatc aagacgctca cgaggaacgc
121 gctatggtaa ttcaacagca cccggcttcc attccgatgt ctggcgagcc gccacgcaac
181 ggttcgtctg caaactccca gcagcacgcc aatagcgttt cgcatctcaa cgccgccatg
241 gaggaaagag cggtggctct tcaagccgcg gccgccgttg ccgccgccgt caccggattt
301 aattccgcca atttgtcggt cggtatggac ttgtccggtc tcgtcccagt aggtctcatg
361 aatcacttgc agcacaacaa tgagcagcag caacataact cgccaaacaa caacaacaac
421 aacaacagca acagcaacca gcagaggaaa cagcgcgagt tcattccgga taataaaaaa
481 gacgacagct actgggatcg gcggaggcgc aacaacgagg cggctaaacg ttcacgcgag
541 aagcgtcgtc tcaacgacat ggtactggag agtcgcgtcc tggaattgac caaggataat
601 cacatccttc gcgcccagct atcggccgtt cgcgacaaat acggaatcaa cccagatgct
661 ctcgtttcga ttgaccaagt tctggccact ttgccgtctc ctgatcaggt ccttagtcta
721 ccacgccctc gttctcgcct cctgtccggc atgagtccgt ctttgggttc cggtcgcggt
781 ggcggatcgg tctcgccgtc gcccagcaat cgcagcctct caccgcccat gtcacagcag
841 tcacaaatgc attcgcacca gccacatcac cagccgaatc aacatcagca acagaggcag
901 tccgttctga tgtcgatgaa ccgggcacac aggtctccta gtccggtagc ggtaggacca
961 ggacagggtt cgggttcggc atctatgcag cagcagcatt cgtacgccag cggccatcac
1021 catcagcagc atcaccagca cggctttcgc tatcaacctg ccggagagtt ggctggaacg
1081 ggcggcaatc acgcgtatca gcatcagcag cagcatcaac atgcacagca ttctcagcca
1141 attaaaactc aacaaagagt actagagagg tctctgccgc ctcttccagc actgactcct
1201 gtgcccgtca tttctcccaa tcaccagctg gagatgggag ggtcatcagt ggaaggagct
1261 caccagcacc ctcttccagg agcggatagg gttggttcga atggcaacgt agcaccagtt
1321 gcggctttct tcgacctgtg ttcatcgtca agcagcagca gttcgagcag ttctagcagc
1381 cacccgggct caagtagcgg tgacgacgga agccattctc cgattgatcc ggccgtggca
1441 gccggccgtg tactgccgct caaactacgc cacaaaaccc acctgggtga aagggacgta
1501 gcggccgcca ccgcttcggc tgccgctgtt ctgctgacac tcaacgagat caaacacgag
1561 ccggaaggga tcgaagacag tccttcggca gtcgactcgg cagttgacag cgtttctgct
1621 gaaatgaaca acaacagtat gagtgaccat cacagccaag ttcatcacca tggcctgcat
1681 caccatgcca accacctcag ccaccaccat catcaacaac agccacaaca gcaatcgcac
1741 cagaacgccc aacaacatca acaactgcag catccacatc accagcatca cctaaacagt
1801 agcggacggc gttcgaccga gtcgagcgat gatcgcgatt cgggaatctc atcaggtgga
1861 gattggtcgt tgtcgcgcag ttcgtcacgg tttagtagca gcagcagtgg cagcaatgcc
1921 agtgtcagcg caatcggcag caacaacggc aacattgttg gccatttgta ccacgcacat
1981 catcaacatc agccagcgtc gaagagaatg aggatgagcc ccaattctcc tgttgtggac
2041 caccaacatc aaaatgagca cccgcacatg caacatcagc aggcggtgca gaggcgcttc
2101 accgctgccc gagctagcca acaacaacag caacaagtga tgaacaatca agaggtagac
2161 gaggaggaga atgacccggc ttctggcatc gttcatgaaa gattggtatt ggtcggtggc
2221 aacgagtctt cggatgagaa taacgacgaa cttcgttccc atattgctcg attggcctcc
2281 gaattggagt ctctcaaaac gatgatgctc ggtggtggcg gcacctcggc agctggatcg
2341 gcgtcgacca ttcggaactg taaaagcagc agtaccaact ttcggcttca ttga
//