LOCUS       LC205690                 590 bp    DNA     linear   PLN 19-APR-2018
DEFINITION  Raphanus sativus RsF3'H gene for Flavonoid 3' hydroxylase, partial
            cds, cultivar: Chouan-aomaru-koshin.
ACCESSION   LC205690
VERSION     LC205690.1
KEYWORDS    .
SOURCE      Raphanus sativus (radish)
  ORGANISM  Raphanus sativus
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Brassiceae; Raphanus.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Nakatsuka,A. and Kobayashi,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2016) to the DDBJ/EMBL/GenBank databases.
            Contact:Akira Nakatsuka
            Shimane University, Faculty of Life and Environmental Science;
            1060 Nishikawatsu, Matsue, Shimane 690-8504, Japan
REFERENCE   2
  AUTHORS   Masukawa,T., Cheon,K.-S., Mizuta,D., Nakatsuka,A. and Kobayashi,N.
  TITLE     Insertion of a Retrotransposon into a Flavonoid 3'-hydroxylase
            Homolog Confers the Red Root Character in the Radish (Raphanus
            sativus L. var. longipinnatus L. H. Bailey)
  JOURNAL   Hort. J. 87, 89-96 (2018)
  REMARK    DOI:10.2503/hortj.OKD-075
COMMENT     
FEATURES             Location/Qualifiers
     source          1..590
                     /cultivar="Chouan-aomaru-koshin"
                     /db_xref="taxon:3726"
                     /mol_type="genomic DNA"
                     /organism="Raphanus sativus"
     CDS             join(108..537,583..>590)
                     /codon_start=1
                     /gene="RsF3'H"
                     /product="Flavonoid 3' hydroxylase"
                     /protein_id="BAZ91634.1"
                     /transl_table=1
                     /translation="MTNLFLTILLPTFIFLIVLVLSRRRNNRLPPGPNPWPIIGNLPH
                     MGPKPHQTLAAMVTTYGPILHLRLGFADVVVAASKSVAEQFLKVHDANFASRPPNSGA
                     KHMAYNYQDLVFAPYGQRWRTLRKISSVHLFSAKALEDFKHVRQ"
     misc_feature    522..539
                     /note="Target Site Duplication"
     misc_feature    538..566
                     /note="poly(T) sequence"
     misc_feature    567..584
                     /note="Target Site Duplication"
BASE COUNT          147 a          167 c           90 g          186 t
ORIGIN      
        1 ctaaccgaga tatgcatggt tttgtcaatt aaaaaaaata cctttatctt atatatagct
       61 tatgcttctc attcctcatt tctcacttac cattcaaacc caccactatg actaatctct
      121 tcctcacaat ccttctccct actttcatct tccttattgt cctcgtctta tctcgccgcc
      181 gcaacaaccg tctccctccc ggtccaaacc catggcccat catcgggaac ctccctcaca
      241 tgggccctaa accccatcaa acactagccg ccatggtaac cacatacggc cctatcctcc
      301 acctacggct agggttcgcc gacgttgtgg ttgccgcctc taaatccgtg gccgaacagt
      361 tcttgaaagt tcacgatgcc aattttgcta gccgaccacc taactccgga gccaaacaca
      421 tggcatacaa ttatcaagat cttgtctttg cgccttatgg acaacgatgg agaacgttga
      481 ggaagattag ttctgttcat ttattttcag ctaaagctct ggaagatttt aaacatgttt
      541 tttttttttt tttttttttt tgtaacgaag attttaaaca tgttcgacag
//