LOCUS       LC157850                 966 bp    mRNA    linear   PLN 17-NOV-2016
DEFINITION  Gloeophyllum trabeum lpmo9D mRNA for lytic polysaccharide
            monooxygenase, partial cds, strain: NBRC 6430.
ACCESSION   LC157850
VERSION     LC157850.1
KEYWORDS    .
SOURCE      Gloeophyllum trabeum
  ORGANISM  Gloeophyllum trabeum
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Gloeophyllales; Gloeophyllaceae; Gloeophyllum.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Yoshida,M. and Kojima,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2016) to the DDBJ/EMBL/GenBank databases.
            Contact:Makoto Yoshida
            Tokyo University of Agriculture and Technology, Department of
            Environmental and Natural Resource Science; 3-5-8 Saiwaicho,
            Fuchu, Tokyo 183-8509, Japan
REFERENCE   2  
  AUTHORS   Kojima,Y., Varnai,A., Ishida,T., Sunagawa,N., Petrovic,D.M.,
            Igarashi,K., Jellison,J., Goodell,B., Alfredsen,G., Westereng,B.,
            Eijsink,V.G.H. and Yoshida,M.
  TITLE     A Lytic Polysaccharide Monooxygenase with Broad Xyloglucan
            Specificity from the Brown-Rot Fungus Gloeophyllum trabeum and Its
            Action on Cellulose-Xyloglucan Complexes
  JOURNAL   Appl. Environ. Microbiol. 82, 6557-6572 (2016)
  REMARK    DOI:10.1128/AEM.01768-16
COMMENT     
FEATURES             Location/Qualifiers
     source          1..966
                     /culture_collection="NBRC:6430"
                     /db_xref="taxon:104355"
                     /mol_type="mRNA"
                     /organism="Gloeophyllum trabeum"
                     /strain="NBRC 6430"
     CDS             <1..966
                     /codon_start=1
                     /gene="lpmo9D"
                     /note="Auxiliary Activity Family 9"
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="BAV57614.1"
                     /transl_table=1
                     /translation="HGFVSKVVVNGQSYAGNTPGGDTSPSPIRQISTISPVKGAANKD
                     MFCGYDAQVASQVAAADPGSKVTFTWSGGGGQNWPHNTGPLMTYMGACEGTTCDKYTA
                     TDAKWFKIDEVGREANGGDWVQQEIMNGGTYTVTLPSNIAPGDYLIRHEIIALHLGMT
                     EGGAEFYPSCTQVRITGNGSGTPNQTVSFPGAYSDTDPGIWDKNVYDPSAPYTFPGPP
                     LSNLVSGDSGTVDGQGGSTSSAILSGGAAPTGTASGSTPAGTSQPSSTTGTGNAGANP
                     SSGKCSLKSRAAPTTSGNLSANYPRHFSRVMKRLLNDFQTTAHQW"
BASE COUNT          179 a          348 c          309 g          130 t
ORIGIN      
        1 cacggcttcg tgtccaaggt cgtcgtgaac ggccagtcgt acgcgggcaa cacgcccggc
       61 ggcgacacga gccccagccc gatccgccag atcagcacca tctcgcccgt caagggcgcg
      121 gcgaacaagg acatgttctg cgggtacgac gcacaggtcg cgtcgcaggt cgccgccgcc
      181 gaccccggca gcaaggtcac gtttacgtgg tccggcgggg gagggcagaa ctggccgcac
      241 aatacgggcc cgctgatgac ttatatgggc gcgtgcgagg ggacgacgtg tgacaagtac
      301 accgcgacgg acgcgaagtg gttcaagatc gacgaggtcg ggcgcgaggc caacggcggc
      361 gactgggtgc agcaggaaat catgaacggc ggcacctaca ccgtgacgct cccgtcgaac
      421 atcgcgcccg gcgactacct catccggcac gagattatcg cgctgcacct gggcatgacc
      481 gagggcggcg cggagttcta cccgtcgtgc acgcaggtgc gcatcaccgg caacgggagc
      541 ggcacgccca accagaccgt gtccttcccc ggcgcgtact cggacaccga ccccggcatc
      601 tgggacaaga atgtctacga ccccagcgcg ccgtacacct tccccggccc gccgctgtcc
      661 aacctcgtct ccggcgactc gggcacggtc gacggccagg gcgggagcac ctcgtctgcc
      721 atcctctctg gcggcgccgc gcccaccggt actgcttccg gctctacgcc cgctggaact
      781 tcgcagcctt cttcaacgac gggcacgggc aacgctggcg caaaccccag ctcgggcaag
      841 tgctcgctca agtcgcgcgc ggcgcccacg accagcggca acctcagcgc gaactacccg
      901 cggcacttta gccgcgtcat gaagcggctg ctcaacgact tccagacgac ggcgcaccag
      961 tggtag
//