LOCUS LC157849 720 bp mRNA linear PLN 17-NOV-2016 DEFINITION Gloeophyllum trabeum lpmo9C mRNA for lytic polysaccharide monooxygenase, partial cds, strain: NBRC 6430. ACCESSION LC157849 VERSION LC157849.1 KEYWORDS . SOURCE Gloeophyllum trabeum ORGANISM Gloeophyllum trabeum Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Gloeophyllales; Gloeophyllaceae; Gloeophyllum. REFERENCE 1 (bases 1 to 720) AUTHORS Yoshida,M. and Kojima,Y. TITLE Direct Submission JOURNAL Submitted (02-JUN-2016) to the DDBJ/EMBL/GenBank databases. Contact:Makoto Yoshida Tokyo University of Agriculture and Technology, Department of Environmental and Natural Resource Science; 3-5-8 Saiwaicho, Fuchu, Tokyo 183-8509, Japan REFERENCE 2 AUTHORS Kojima,Y., Varnai,A., Ishida,T., Sunagawa,N., Petrovic,D.M., Igarashi,K., Jellison,J., Goodell,B., Alfredsen,G., Westereng,B., Eijsink,V.G.H. and Yoshida,M. TITLE A Lytic Polysaccharide Monooxygenase with Broad Xyloglucan Specificity from the Brown-Rot Fungus Gloeophyllum trabeum and Its Action on Cellulose-Xyloglucan Complexes JOURNAL Appl. Environ. Microbiol. 82, 6557-6572 (2016) REMARK DOI:10.1128/AEM.01768-16 COMMENT FEATURES Location/Qualifiers source 1..720 /culture_collection="NBRC:6430" /db_xref="taxon:104355" /mol_type="mRNA" /organism="Gloeophyllum trabeum" /strain="NBRC 6430" CDS <1..720 /codon_start=1 /gene="lpmo9C" /note="Auxiliary Activity Family 9" /product="lytic polysaccharide monooxygenase" /protein_id="BAV57613.1" /transl_table=1 /translation="HTIFQRVYVDGVGEGHLSGIRIPESNWPIMDLSSNAIICNGGVN PYHEPVSLAIIQVPAGSTITAEWHPTIDDVNTTESIRPDHKGPVIAYLAKVPDALQTD VAGLSWFKFYEDGLSDDGTWATDRLIANAGKVNFTIPSCIQPGAYLLRHEIIAVHKAE TYPGAQFYLRTLLTIFVFEVETAATPQMECAQLNITGPGSVVPSPTATFPGAYGSTDP GITVDIERLINYTVPGMPAEG" BASE COUNT 172 a 233 c 173 g 142 t ORIGIN 1 cacacaatat ttcagagggt atatgtggac ggcgttggcg aaggacatct gtccgggata 61 cggattcccg agtccaactg gcctatcatg gatctctctt cgaatgctat tatctgtaac 121 ggcggcgtaa atccctacca cgaacccgtg tccctcgcca tcatccaagt gcccgcaggg 181 tcgaccatca cagccgaatg gcaccccacc atagacgacg tcaacaccac cgagtcaatc 241 cggcctgacc acaaaggccc cgtcatcgca taccttgcaa aagtcccgga tgccctccaa 301 acagacgtag caggtctcag ttggttcaaa ttctacgaag acggactgtc cgacgacggc 361 acgtgggcaa ccgaccggct catcgccaac gcgggcaaag tcaactttac catccccagc 421 tgtatccagc cgggcgccta cctgctgcga cacgaaatca tcgccgtgca taaagctgag 481 acgtacccag gagctcaatt ctacctacgt acactcctca cgatcttcgt cttcgaggta 541 gagacagctg ctaccccgca gatggagtgc gctcagctga atatcaccgg tcccggctcg 601 gtcgttccct cgccaaccgc gacctttccc ggtgcctatg ggagcacgga ccctggtatc 661 actgtcgaca ttgaacgatt gataaactac accgttccag gtatgccggc agagggttaa //