LOCUS       LC157848                1056 bp    mRNA    linear   PLN 17-NOV-2016
DEFINITION  Gloeophyllum trabeum lpmo9A-2 mRNA for lytic polysaccharide
            monooxygenase, partial cds, strain: NBRC 6430.
ACCESSION   LC157848
VERSION     LC157848.1
KEYWORDS    .
SOURCE      Gloeophyllum trabeum
  ORGANISM  Gloeophyllum trabeum
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Gloeophyllales; Gloeophyllaceae; Gloeophyllum.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Yoshida,M. and Kojima,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2016) to the DDBJ/EMBL/GenBank databases.
            Contact:Makoto Yoshida
            Tokyo University of Agriculture and Technology, Department of
            Environmental and Natural Resource Science; 3-5-8 Saiwaicho,
            Fuchu, Tokyo 183-8509, Japan
REFERENCE   2  
  AUTHORS   Kojima,Y., Varnai,A., Ishida,T., Sunagawa,N., Petrovic,D.M.,
            Igarashi,K., Jellison,J., Goodell,B., Alfredsen,G., Westereng,B.,
            Eijsink,V.G.H. and Yoshida,M.
  TITLE     A Lytic Polysaccharide Monooxygenase with Broad Xyloglucan
            Specificity from the Brown-Rot Fungus Gloeophyllum trabeum and Its
            Action on Cellulose-Xyloglucan Complexes
  JOURNAL   Appl. Environ. Microbiol. 82, 6557-6572 (2016)
  REMARK    DOI:10.1128/AEM.01768-16
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1056
                     /culture_collection="NBRC:6430"
                     /db_xref="taxon:104355"
                     /mol_type="mRNA"
                     /organism="Gloeophyllum trabeum"
                     /strain="NBRC 6430"
     CDS             <1..1056
                     /codon_start=1
                     /gene="lpmo9A-2"
                     /note="Auxiliary Activity Family 9"
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="BAV57612.1"
                     /transl_table=1
                     /translation="HGYVDQVTIGGQVYTGYQPYQDPYESPVPQRIERAIPGNGPVED
                     LTLLDIQCNGSGGSGTKPAALIASAAAGDEIAFHWTTWPSSHVGPVITYMGKVPSNTD
                     ITSYSPTGSDVIWFKIDEAGYENGKWAATDIMSAQNSTWTVTIPKALAPGQYIVRHEI
                     IALHQAETYPGAQFYPDCFQVQVTGPGTETPTSQALVSFPGGYTPTTPGITFNVYSGS
                     ITSYPIPGPPVWTSNEAFSGGSSSSAAASSTAVASSTADSSSSAAATQSSSAAASGSA
                     APSSSAIGTSTASSAAASGTAIVDANTCMNNYNKCIDAGQPDPDWSGCTATKDACLAG
                     ATYQRLARSGTLGRLSF"
BASE COUNT          221 a          357 c          259 g          219 t
ORIGIN      
        1 catggatatg ttgatcaagt cacgataggc ggacaagttt acaccggata ccagccctac
       61 caggacccat acgaaagccc cgtcccccag cgtattgaga gagctattcc aggaaatggg
      121 cccgtcgaag atctcacact ccttgacatc caatgtaatg gctcaggggg ctccggtacg
      181 aagcccgccg ctctcatagc ttcagcagcc gctggggatg agattgcctt ccactggact
      241 acatggccca gttcgcatgt cggcccagtc attacttaca tggggaaggt gcctagcaac
      301 accgatatca ccagctattc ccccactggc tccgacgtca tttggttcaa gattgacgaa
      361 gcaggttacg agaacggcaa gtgggccgct acggatatca tgtcggcaca gaatagcact
      421 tggactgtga ccataccgaa ggcgctcgct ccgggacagt acattgtccg tcatgaaata
      481 atcgccctgc accaagctga gacctatccc ggtgctcagt tttaccctga ctgcttccaa
      541 gtccaagtca ccggccctgg tacggagaca cccacatctc aggctctcgt gtccttccca
      601 ggcggctata ctcccaccac tcccggcatc accttcaacg tctatagcgg tagtattact
      661 tcatacccca tccccggtcc gcctgtctgg acgagcaatg aggctttctc cggcgggtct
      721 tcctcatctg ctgcagccag cagcacggca gtcgcctctt cgaccgctga ctcctcatcc
      781 tctgcggccg ccacccagtc ctcctccgcc gccgcttcgg gctccgcagc accctctagc
      841 tctgctatag gtacgagcac ggctagctcc gctgccgcta gcgggaccgc catcgtcgac
      901 gcgaacacct gcatgaacaa ttacaacaag tgcatcgacg ccggccagcc cgaccctgac
      961 tggagcggct gcaccgcgac taaagatgcc tgcctggctg gcgcgacgta ccagcgactt
     1021 gctcgttctg gtaccctggg acgtctctct ttctaa
//