LOCUS LC003310 1241 bp DNA linear PLN 15-JAN-2015
DEFINITION Cochlearia acaulis chloroplast rbcL gene for
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial cds, specimen_voucher: HIRO:HIRO-MY 94858.
ACCESSION LC003310
VERSION LC003310.1
KEYWORDS .
SOURCE chloroplast Cochlearia acaulis
ORGANISM Ionopsidium acaule
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Cochlearieae; Ionopsidium.
REFERENCE 1 (bases 1 to 1241)
AUTHORS Tsubota,H., Inoue,Y. and Nakahara-Tsubota,M.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) to the DDBJ/EMBL/GenBank databases.
Contact:Hiromi Tsubota
Hiroshima University, Graduate School of Science, Miyajima Natural
Botanical Garden; 1156-2 Mitsumaruko-yama, Miyajima-cho,
Hatsukaichi, Hiroshima 739-0543, Japan
URL :http://www.digital-museum.hiroshima-u.ac.jp/~museum/
REFERENCE 2
AUTHORS Tsubota,H., Nakahara-Tsubota,M., Inoue,Y., Uchida,S. and Mukai,S.
TITLE Notes on naturalized plants in Hiroshima Prefecture: 5. New
locality and phylogeny of Ionopsidium acaule (Desf.) DC. ex Rchb.
(Brassicaceae)
JOURNAL Hikobia 16, 491-497 (2014)
COMMENT
FEATURES Location/Qualifiers
source 1..1241
/collected_by="Hiromi Tsubota & Miho Nakahara-Tsubota"
/collection_date="2014-03-19"
/country="Japan: Hiroshima, Hatsukaichi-shi, Shingu"
/db_xref="taxon:104256"
/lat_lon="34.35 N 132.33 E"
/mol_type="genomic DNA"
/note="synonym: Ionopsidium acaule"
/organelle="plastid:chloroplast"
/organism="Cochlearia acaulis"
/specimen_voucher="HIRO:HIRO-MY 94858"
CDS <1..>1241
/codon_start=2
/gene="rbcL"
/product="ribulose-1,5-bisphosphate carboxylase/oxygenase
large subunit"
/protein_id="BAQ20808.1"
/transl_table=11
/translation="VGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAG
AAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGS
VTNMFTSIVGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLL
GCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKS
QAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLSHYCRD
NGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGDRESTLG
FVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQF
GGGTLGHPWGNAPGAVANRVA"
BASE COUNT 337 a 248 c 296 g 360 t
ORIGIN
1 tgttggattc aaagctggtg ttaaagagta taaattgact tattatactc ctgaatatga
61 aaccaaggat actgatatct tagcagcatt ccgagtaact cctcaacctg gagttccacc
121 tgaagaagca ggggctgcgg tagctgctga atcttctact ggtacatgga caactgtgtg
181 gaccgatggg cttaccagcc ttgatcgtta caaaggacga tgctaccaca ttgagcccgt
241 tccaggagaa gaaactcaat ttattgcgta tgtagcttac cccttagacc tttttgaaga
301 aggttcggtt actaacatgt ttacctcgat tgtgggtaat gtatttgggt tcaaagccct
361 ggctgctcta cgtctagagg atctgcgaat ccctcctgct tatactaaaa ctttccaggg
421 accacctcat ggtatccaag ttgaaagaga taaattgaac aagtatggac gtcccctatt
481 aggatgtact attaaaccta aattggggtt atccgcgaag aactatggta gagcagttta
541 tgaatgtcta cgtggtggac ttgattttac caaagatgat gagaatgtaa actctcaacc
601 atttatgcgt tggagagacc gtttcttatt ttgtgccgaa gctatttata aatcacaggc
661 tgaaacaggt gaaatcaaag ggcactattt gaatgctact gcaggtacat gcgaagaaat
721 gatcaaaaga gctgtatttg ccagagaatt gggagttcct atcgtaatgc atgactactt
781 aacaggggga ttcaccgcaa atactagttt gtctcattat tgccgagata atggcctact
841 tcttcacatc caccgtgcaa tgcacgctgt tattgataga cagaagaatc atggtatgca
901 cttccgtgta ctagctaaag ctttacgttt atctggtgga gatcatattc acgcgggtac
961 agtagtaggt aaacttgaag gagacaggga gtcaactttg ggctttgttg atttactgcg
1021 cgatgattat gttgaaaaag atcgaagccg cggtatcttt ttcactcaag attgggtctc
1081 actaccaggt gttctgcctg tggcttcggg gggtattcac gtttggcata tgcctgcttt
1141 gaccgagatc tttggagatg attccgtact acaattcggt ggcggaactt taggccaccc
1201 ttggggaaat gcacctggtg ccgtagctaa ccgagtagct c
//