LOCUS LA858420 3585 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c41471_g5_i6.
ACCESSION LA858420
VERSION LA858420.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 3585)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3585
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c41471_g5_i6"
/organism="Monomorium pharaonis"
BASE COUNT 1227 a 476 c 534 g 1348 t
ORIGIN
1 gcacatataa ctctcacttt tgacaaattc gtttttagca gattttacta atagaaaagg
61 atataaatgt ataaaataag gatttttatt tttttaatta acttaaataa tcagaatatt
121 tttatcggta ttcgtatggt gcaatgttta gttttcaaga agtaagggag tttcaattta
181 agaaactgtt ccaaatttag tgcctctctc tacatttata tacgttttta tataaaaaat
241 tttttacccg gtggagaata aataattgat caatttttag tcaaatataa acttataaaa
301 agtaaaacac catattaatt tttaattatt gatcaatata tgggacctaa aatctgaatt
361 attaatgatt aattattgat cctataagca gtaatatatt agcagcttag aattgatcta
421 aaattgcttc atattataaa tatacctaaa tcaatagttt atcaatattc tcaatagcgt
481 tcagttttgc aggaattttg gaaatatttt gctagatata tattgtataa tttataagta
541 cccacataaa atatatgaaa atatttttca taaaatattc attatgatgt acttagcgat
601 accaacatat gtaacgactc catcgatact cgatattatg tggcctccta acaaattaca
661 acaattgttt acgatttcca tagaatggaa aatagatatg gacaagtatt acataccgat
721 tatttacaac actattttaa ttatggtgga tataattatt ctaattggtg ccgacagtat
781 atatattgtt cgtgcttgta gttcattttc tattgttagt caaaaattca agacaatgac
841 gtcaaaatta gatgtcaaca tggaaattag caaatgttac agatgttaca taaacgcaaa
901 tgttagcgaa tgctgcataa atacaatatt taaatcggca agcgagcgag tgatatacca
961 ggaacacatt atatgtttaa agaaatatca gattgtttta gagtagagtt tttttaaata
1021 atcttgccac tgtatatatg taatttattt gtgattcatt tttataatat attaatgtac
1081 gttttattat ttacaggttt gtccagatat tgaactcatt aaatcgagta gtgacattaa
1141 tctggttgtt tattgcttat acgattttaa gtctaggtgg aattcaactc gcatatgtgt
1201 tggataaatc taaaacggta ataaaaatta ttgtcacagt catagacatg gtactgcaac
1261 tcatgctcct ttgctatcct ggtcaaaaat tgctaaatga gagtcaaaat gttttctatc
1321 aaacatatgc tataaaatgg tatatattct caccaagatt aaaatcgttg ttgattataa
1381 ttcttcataa aagttttata ctttgcggct taacggattg taatatgttt tcaatattaa
1441 tgaagactca tagtgcagta agtacaagtg ttttgaattt ttagacatgc aatgtacaag
1501 atggcaactt atgcaaatgt attttattta aggtggtgca agcaggcata tcttacttca
1561 tgatattttt atcactcaaa gattaattag ttctgtatat tttatagccc ttccttaatt
1621 ctgtcagagt taagatgttt gagcgattat ttcacgacat tatcgagttc caatagagaa
1681 ttttttacaa ttaaattttg cttagacata aaaaacactt caaaagtgat tgtatctaca
1741 tttattcact agcacatttt acgcgaacaa tgtaattgaa ctacaaattt acgaaatgag
1801 ttatcttctt cctagtcgta ctcatcttca attcttcaca tgcatgtcat tcataataca
1861 acatttatag caaaaatatc atgctgcatt ttttacgaga atacaatatc aataaaatat
1921 tattgtcaca tattggtctt tggccattac aaagtaaatt tgtaagacgt ttgttaccga
1981 tttcattact aatacttttg ataagtttct ttctattgca ggtaacaata tatcaatatg
2041 tatattcata atccacgtaa tacatgtagt tcctacatga atttaagtag tgcataaaat
2101 gttatttgaa atatatcttt tttaaatata atatgtattt aataacttac aattaatatt
2161 acgcttagat aacaacaatg tttgattgtt ggaaagataa ggacataatt tttgatattt
2221 gtctcatcgt tgccgcaatg gtgattttta ttgctaagtt atggaatgag ctttttaact
2281 atgacacggc acaacgttta tacgaagcta tggaaaatca ttggaatata tttacaagtg
2341 aatctgaagt gcgtattctt aaaaataatt ctagtaaatc acgaaaatgt ataaaaatgt
2401 acgcaattct attatataca gcgataacaa tatttctatt gactccattt aaaccaatac
2461 tactcgatat catatcgcct cttaacgaat cacgagagcg atactttgca actgcttttg
2521 aagtaaaaat agatatgaac aagtattacg taccgcttct ttgttacaat acgagtgtaa
2581 tattggcggg tgtagctgtt ctaattggta ccgacagtat atttattact cgtatatttc
2641 atgcttatag tttattttat attattaatc aacatttcaa gagaatattg acatcggata
2701 tcagtataaa agatagcgaa tattacggac atacaaacgt atatgttaat aacgaatact
2761 acatgaacgc aatgcttaaa tcgacaaggg aacaagaaat ataccagaaa tttgttatat
2821 gtttaaaaaa acatcagatt gctttagagt ttgttgattt attgaattca atttatcgat
2881 tagggacatt aattacaata ttaactcctt gtatggttat aagtctatct ggaattcaac
2941 tcatatatgt gttggatcaa attgagctgg taataaaaaa tgttatgata atcgtatcag
3001 tattaacaaa tctctttgtt ttttgctact ttggtcaaca gttgttaaat gagagtcaaa
3061 atgtattcca tcaagcgtaa gagttttttt attttgttta gatttaatat ttatcataat
3121 gttggtgata ttagcaattt caaatgtaaa atgttaatgc acaatgttgt catgtaatag
3181 aggaaagaag tttataaact agatgtggga ttatggaatt tgtgaagtct cgtatacttt
3241 gtattgagtt ctgaggagaa ctgtccgaac tatcttcttt acatactgtt tagatgttat
3301 acatggccac ttgtcattaa tgctatgttt tcataaaagt tgcatttcag tattgcaagt
3361 tctattggtg tctattcttt atcttatttt gagaaatatg tcaggtatta actttttaac
3421 attagtgtaa ttttatgggc ttgaatatag ctttcaagta atttgatgct tgacgtaatg
3481 tgtggatgca tttgacatgt aaaattatac tttttcagta ttatggaccc tcgcgattgt
3541 cacaagtctg tgactcatat tctcttccct cgtaatattt tttgt
//