LOCUS LA849294 5705 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c40721_g3_i1.
ACCESSION LA849294
VERSION LA849294.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 5705)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5705
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c40721_g3_i1"
/organism="Monomorium pharaonis"
BASE COUNT 1545 a 1369 c 1219 g 1572 t
ORIGIN
1 acacgcgcgc gcgcgcgcac acacgctaca aatacaatat aatgttttct ttcatggttt
61 tgcatggcct aataaagcta aatgaaaaca atccttattt ctattaaacg agtatctaag
121 ttatgacaaa atatccgatt gttactaaaa ttaaaacttt gcacctatat aacaaactat
181 atatcttaca gacgttgcaa cttccgaaga attggcagga acaaactcgc attgcataat
241 ttctctgatc tcgcacaatt tgcgtgaaaa attattgctg atgaactgcg tacttaaatc
301 gcgcatttag cgccaaataa ggttgatcct ggttctaatc caaaagggga atatcataaa
361 tgaggatccg aacaaccata tacagcgatg atatacagat agtgacagca caataaaatt
421 tgatttagta ctaatattat aaattaagta ccaatgagtg cgctgaaatc agcggcggtg
481 cttctggcga gagttacgcg cgaattattt tgactaaaac atcgacagct tcgattagct
541 aactctcaca aattaatatt ttcatttaat gtgtattata aacgaaaaaa gataatgtaa
601 taaataattt gtatatatta aaaactgatt tatgcaatgt tttctttaaa tttacatact
661 ttttaaaaac atgaatccat atatgtaaat ttcttatatc ttcttttatt tatcaattat
721 tattctacaa ggatttaacc gataaaatgg cattttttaa ttggagatgc ttaaactagc
781 ttcattgaaa acagtatgac tgtggctgct gttgtagact atctgcagta ttcttgtgaa
841 aaatatgtta acgaagaaaa tattgcataa accgggatca atcgatgctg ccggaactaa
901 acgacgaaca agctattttt gcttgtcgaa caaaactgtt gatagttcca gactgatttt
961 ttgtggcgtt caaacattga agcgcgtttc cgagccatca gcgagcatta aggtgactgt
1021 gcgattgttg atccaaatca gccgagccaa acgcataggg ttcaatcggg ccacgtcgtt
1081 gatgggcgca gtactgtacg atttgacgca gcgagtctgt gagttgccca ggccaaacat
1141 accgctactg gtttgctgcc aaaaacatag tttattctcg gaacaagaat aactaacaag
1201 gaacttccct tccggtgaaa aggccaacgc ggtaaccggc gctgagtgag ctggaacggt
1261 ttgacatttg acattacctc gtaattcgta taatgctagt tgaccgccgc gaccgccaac
1321 cgctatcctg cgcgttgctg gacaatgact gacttgatta aatctacaca ctgccggaaa
1381 tacttcgttc aaaggcttca ttttcaaatg acctggatca aggcaatgta gaataatgtc
1441 catgacctct acaagaagat cgctcatctc actctgcatc ttgtcaatta gttgttcaac
1501 gattctgagg atctctggct ttgccctagt taaaacactt gcacccagat tgacattcaa
1561 agtctgagca ttctgttgaa gagtgttaaa tctggctact tcgcgagcca tcgtggtgat
1621 aaaggcggct ggcctagcgg tagcaattag tgttaaagcg tgacgtgccg tgcgacaagt
1681 gtcggcttgc ggggtgagag gaaggccgta tgtcagactc ggcactaact tatccgcatc
1741 gcagcacatt tccaataagc ctaataatac cttggataca tcaagatagg gttcccacac
1801 agtaaatccc ctgccaataa gatcaatcgc tgctcttcgt aatgccgtgt gtaacggtaa
1861 cttgggagaa tgaggcgcgt gcaataaatg agtgagtgcc aagctagtat gcctggcaag
1921 attattattt cctatgccaa agccttccac gatcgaactt ttccgtcttt gctcgttatc
1981 ccttctttgg ttcgtagtag ttacatcttg accaaattca gcccctatca cgcccaacaa
2041 cactaccgcc gtagtttgct ttcgcttcaa ttccgctacg ctcgatggct tcctggctat
2101 acttaactct tcagctaatt cctcttcttc atcttcttct tctggttgtg attcggatgg
2161 tggcaccgga cttccggcag ccggcgaagt ttgactttgt ggttgcggtg cgattggctc
2221 ctgagtacta tacatcggca aatattgcga ccagttatcg acaagcgctt tacgaccctt
2281 tgagcccatc ctgccaagtt cggcaagcag caaagcttga gctgcttctc gaatctctac
2341 acactgatgt tgccaccttc gtgccatcat ttctacttga ggtcgcttaa aggtcttagc
2401 accaccttgt gccgcaactt tatcaggtag taatacacaa tgcaaagtgg ctagaaggga
2461 ccaaccttgc tttatctgcg cttgttgtac cgtgtacatt tcctcatttt cctcttctgt
2521 cttgttccag tttactgcac ctctattgcc tggcctatgc attttgcgat ttcgttcttg
2581 ttcaggtaca aacgtggcat tgttcattga cattaaagta ttcgataacg cgactactgc
2641 cagtaaatga ttactcgtta atgttgttga taattcccaa tgtgctctcg ctgtgaatgc
2701 tctagtgagt ctctcttgtc taactagttc agcaggtaag cgttgctcca attgagtcgt
2761 aggttcaccg accggttcaa gctgtgtctg ccaagttggc aataacaatg acatgtaacc
2821 tcccttggat agtacaccga atgaaacagg aaccataggc cgtagtaaac ccaactttcc
2881 ctcgcaaact ctatctaagt ctggatccat gccccaagca tgcaaaaggc tcaaaagcaa
2941 ctgtgctact tccattgtcg cgtttggctc gctgaacgca ccgtttcgtt tcaaactatt
3001 cttcgccgca tcgctgttat tccaactgtc acctttgccg tcaaatgtgg acggcttgag
3061 gccgacgctt tctgctttgg cctgtaactt agtatgtaca ttctctgcac cctccttcat
3121 cttagccaat ataccatgac gatctttctc cttcaatatt cgctcaacat cccccgcctt
3181 atccttgacg cgaccgaaaa agtcaacaat tttcttatgc gcatcaggac tggcggattg
3241 agtgagtgct gcaactttct gatattcggc agcggagata agtccttgtg cttccaagga
3301 accaggcgac atggcaccat actcgtcgct gagcaattgt actatcagtg cttctatgtc
3361 aaagaataaa atatgacttt ctggatcttt tgggttactt ctgaatcctt ggatcatcag
3421 cggcgaacct ttggctttta tctgattccc gtggtcggga ccatgtccac cgtggagctg
3481 ttgcaattga tgcagccctc tttgcgtcgc gtgtctaatc gccgacaagt ttcgatgacg
3541 caaaccccta aaaaaatgta cagcaggatt agctagtcct agctcaccgc cggtagcgga
3601 tccgccagct gccgctatag tgttttcatc acaagcatag agcacctctt ccgcgataat
3661 gccatgaagt acgcgatcca agtgaccagt ttccatttgc cagacgtata cggcaccgtc
3721 tgaacatccg actatcatga aatcatctag cggtctccat ttgatagtta caactgggaa
3781 aagatgtcgc gaagcaagca cgacgcattt cctttccgct aatgagagta gggtaacact
3841 gtgatccgat gcaacgctac aaacgcattt ctgtatccta ggactgcaat tatcgggggg
3901 caccatcagt tgcgtaattt caccagcatg aacgcaaaat cgatgaatca atgtgccggc
3961 atataaatcc cagaggcaga cagcaaagtc cacagaacca gatacgagat gggtgcgatc
4021 gtaacgagag gctgcgccat gaggataaag cagacaattt actcgtcccg agtggcccaa
4081 taaaacttga tgtggtggcc aatcatcgta ctgctgatga ttgccatgaa gtagttgaag
4141 cattacggtt tgagtcgctg gcacaatgat gatgctacca tcctcacgac cgacgactag
4201 tcgactttgt tgcggcaaat atatgcaagc agtaagctta atgccatggc catcgccagt
4261 gtccaactga tcaagtatcc ctacaggaga cggtttcatt gcatcccagg cagcggtgag
4321 actagttttc acgatcggtg acaatgccgg tgatgacgat ccgtcattct ggcaaatctg
4381 agcaacctgt tgcgtcgtta cgtccggcac tgtccaaaga ataacgacac cctcactgtc
4441 tccgcgtaag agatatttta aggtcttgtt ctgacgttgc acggtgacta atcgcatggc
4501 cggcggacag gaaagaggct tatctccagg ctgtgttaat gtacagtaga gatagggctg
4561 atcgtactct gcaccggcgg tatgaaaatt tttgttgtcc gcaacgctgt caagttgtac
4621 cagaatcttt gctggaagtt tatataaata tccgtgacct tcgtcgctcc acagaataac
4681 cctatcagcg gctaagaaat cgcctgccat ccaccgttca ccacgtgggg ccgttatcga
4741 gcagagaacc gagaaatcac cagcatcaaa tatctgccaa tacttggagc atacaatcag
4801 cactgttctc tggttgtagg ggcagcaagt cattgcaagt gcattcaagc agcgaatctg
4861 tttgctttcg tgctcgtaca gaggctcact gttccgattc tcatgtccca aaagcgtcca
4921 caccttgact gtgcctgttg tcgtcaaagc cagcacgacg tcgtctttcc gtttggccgg
4981 ccgcaaaacg tgcaaggcgc taatccaatc tggattgacg cgggaactta gagtaaacag
5041 cacttccaaa ctgaatgggt ccatcaccaa aacctcaggg taatatccag agcaaaataa
5101 tctaacatcc tctccacccg tggaaacata gggcaacatt tgtgtgtgaa cgctattaag
5161 ttttactgct tctcggcatt ttccatcaac tagatcccaa gtgcacatct ctccgctctc
5221 actgctgctg acaataaaat tctgctccat tacaacactg gcccgactga gacacataat
5281 cggagcggta tgtccaacca acaggcatct aggagtcatc tttaatgttt ctggatccac
5341 ttgccacaga catatttggc catcgtagca gcctgttacc agagtctttt gatctcgaga
5401 taagtaaaca caggaaatac agtgggttgg cgctatgcgt ccccatagca ctatgggcac
5461 cactaaactg gtgcctgcag tcatccttgc ttagacagtt ggctcgagct gacgaacgcg
5521 tcagcgtcag atagcattag acttccgaaa tcattggaat cgcgaatgga atcaattaag
5581 aggaactaga ggcgtctgcc gtctgctgca acacgtcaga ttggcaaaat gtcacaaggt
5641 acgaccaatc aaggctacag ctacgactac gactacgagc tactatggtg gaagaacata
5701 agggg
//