LOCUS LA836155 7536 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c39213_g1_i3.
ACCESSION LA836155
VERSION LA836155.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 7536)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..7536
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c39213_g1_i3"
/organism="Monomorium pharaonis"
BASE COUNT 2454 a 1390 c 1358 g 2334 t
ORIGIN
1 aagataacac gacgaaacaa agagcatttt gcataaatta acataaaatt aacataaacg
61 tataataatt ttaatcctat agcctttgag agaatttaaa cacgcgatta atattataca
121 tgcgatgaag aattttttac ttgaattttc cgcgccgaat atgttcaacc aatctaatct
181 cagcattgaa cgcgcgacgt gaaattcacg tgtacgcgaa aatgaccgaa gaattacgat
241 agtagccgag aacgcaaatg caatcggccg caaaccgggt ccggatagtg gataccggac
301 taccgggagt accgggccgc agttggccgg cgtggctcat gatagatggg tagtttatat
361 tattcgctcg ctcgtagtgc tttcgcacgt tgagctttga ttcacatccg tatgcctact
421 attcgagcgt gttcagtatt cagttgcgcg taaagtgtct cgtgtttcgt taaaaccgca
481 tcttgcgaca atctgaatat ataatctgac acgtcgctgt aatcggcgca cacgcacact
541 tactttgcag aattgtggca agagctatga cgagaaatcg atgacgacct gtcatacatg
601 aagcgtcttt atgacatttc gcttaatatc tttctcgaga cgacgataga aatttgacgg
661 gtgaatcatg tcatcgtcaa gatccagacg acctagcgta tcgatatatg attatccgga
721 acatctgaat ccgttcaacg atgacacgac gtattctcaa ccacaagtgc atcgcgatgg
781 taaatcgtcg aaagactcca aacacaagtt ctggacgttt ggcagaagcc gaaagaaaag
841 atcgaacagt ttctcgatca aatcaacttg gaatggattg ttcggaaagc gcaaagaaac
901 tccagaatcg atggaaaaaa ggtcgactat tacaacagtc tcgactacgt ataagagaga
961 gccttacgat agaccgacag cacctccacg attgtctaag gatcagcagg aatttgatga
1021 agccttgggc actttgacga gaagaaggaa gtacacttac gacaataata tctcgagaca
1081 tagctcgaat ttaacggtaa acggggatcc tgctaggact tacgatggaa atcctcaaat
1141 taccacagtg tctattatga acgtcgatct cactccgaaa ccaccagcca gaagatttgg
1201 acaagtgagc ccaagaccga cggacaaaat accaccttta gatttcgagg acaagcaatc
1261 taaacaaaat ggtagtatta gttgtcacga ccaaccggaa gaggtcccga ttccaccaat
1321 gcgaagattc ggcaatagat catcacaaag attgaatgga gtcacatcgg atatagagga
1381 agattcgact aatcgatccg gtaatattag cctgagagat gaaaacgaaa atgttcccga
1441 agattacgtt tttaagagat ttaatcaaga aactgtgaga agatcgaatt tgtccattaa
1501 tagttgtaca tccattacca gtacgacaag cacgtacggg cgcaagaaac gaagagcacc
1561 gcaaccgccg aaacagaagg aacaattgga tacctctctg gaaataaata attggtctat
1621 agtggaagtg aataaaacag aacctatacc agaaatgaca aaacttgaac tccaaataac
1681 cgaaccgatc gatatcacca aggtcacaga aaacatcaat gagatgaaaa atacttatga
1741 agaattgagc gagacatcgc cgcggaaaga aagtgagcag actgcaaagg acgtgtcgtt
1801 tgacaaagtt atgagaaata tcggtaagaa tgaaacgtgt gacatttcta aggattacga
1861 gtctagcgaa aaagaaaaaa agaattcttt agaagacaaa ataacattta actgtgatga
1921 aaaatcaaag aatactgaat ccgaagcaaa aattaataag aaattaaata aggagcaatc
1981 aaatatcatt gctaaagatt ttattgaaaa agatcctata gaaatagaat atagaagaac
2041 atctcaagaa aagatcgaaa ttatcaagga catcgatcaa gaatctgacg aagtttgtct
2101 gagagaaaaa ggttcgttat tgcaaagtga tagtttttcc gtgaaggaag aaatagaaaa
2161 gattgaaaga cagatcaaga cattggaaag caaaaacgca tataaagaac aagaagatat
2221 cgataacgtg aatcacgatg atccgataac aaacaccaga ttatctatcc aggcgaatcg
2281 tcgacacttt tttgaaaata tggtagacgg gccatctggt ccgattaagt tagaattcaa
2341 gaaattgcca cgtgagcaga aggacattga tgtgattaga ttaatggatt ccccaatacc
2401 agcgtctcgt gacacggtga aggtgatcga attacacatt tccgaaccaa tcagacacaa
2461 acctgaactg ttggatgagg taaatccaat accgaaaccc aggagacata gtgcgcttag
2521 tttaagagac acatctgaat ctagatcaaa ggatgaaaat aggaacttac acgacaatga
2581 taaaagagga cagtcctttt aaaattttaa agctttgttc atatttttag actttccaat
2641 aaaattctat tattttcatg attttttaca tgtattgaga ggataattat gtaactgtaa
2701 tttcgaaaat ttatgtttac agataaactt attcaaagac tgttacattc tatattgtct
2761 ttttttatta aatcgcaact atttcatact aatgcatatt gaatatattt ttctgcaaaa
2821 aatttattgc agagaaaact agaattttta tgttacgatt atgttatgaa tgttaattat
2881 acattatttt tacttctgat atatttactg taacacttag ttattatttt cattatttat
2941 tgatgcgaaa taaagcctaa acatcgtaga aatatgtgat aaagtacata atcctactcc
3001 aaatctatta aaaacttaaa aattaaaatt aaaaaagtgt aggaaacagg aagtgataac
3061 agcgtacttc tcttgctttt caaaagtatt ttacaagtta tttattgtag aaatattttc
3121 attcataatg tctgtaattc gaaacaaaac aattgtcgaa taaaaacaat tgtttcataa
3181 cgtttatttt ggtttaattc ctagacgctt ttgtttatat tttataaacc tcattaaatt
3241 tgcgttcaca gttgatacta tgactgtgcc atcttgtaaa tgtttcttct gctgatgcat
3301 cttatttttg aaatgtggca ttacagatag caatctctgg actaatttaa tatctgctgc
3361 tagatgatcg gtttcatctt ctgcataaat atccattatt gcatctagag attctgctat
3421 cacccataca tgagtttcag ttttggaaat atctaataag gacgtggaaa caagctttat
3481 catttcataa ttttttgaat ctttgttatt taacataatc agtactaaat tacagagcat
3541 ccttatcata ttaacgcgga cattcgtatt gatacattga ttcacttcat ttaacatcgg
3601 ttggatatcg ttacaagtta attgatttaa ttcgacgaca tttgcccgta cttcgactaa
3661 acgttgaaga atagctctca tagcagcagt acccgcttct gtaatattcg catctgattt
3721 ctcatcatcc ttcctgataa cgtatttaaa ctctgttgca atctccatcc atttcccaaa
3781 taaattatca acgcctccaa aaacatcgat ctctatgcta ggtaataaat tgtttaaaca
3841 taaaaaagct gcacactgaa tgtcgcgaaa ttgtttcaat gttgcttttc cctcttcggt
3901 ttgatccagg atttcctggt tgctttcatc cactacaaat ttagcttttt cccaaatttt
3961 atcaatcaag ttacagctgt ttataatttc aactagttcc attggaagcg tcgacatttt
4021 caaatcttca ttcatagaat tatcatcgaa attttcagac tctagctcca ttgtttcaaa
4081 atcgtcggtg tcagaatcag ttgcattgtc ctcatgttca aaacataagt ttgctaaaat
4141 ctgtaaagct tgttcttgca cttccaatat ttttatactt tcctgtattt tttttctctt
4201 atcgttcgaa gcattgcttt catgcggcag gatagatatt aaatgagaca gcgtttgtag
4261 atgatcgatt gcaagtacgt cagacaatac cattaacact ttatgaaata tatgcatctg
4321 gttattgtca gtataattac tgatattgat taatatatca gctacacaag tttttaacga
4381 caatacttta aaagcagcct caccgtctgc ttttaaatcc agtaaactaa acaaaactga
4441 ttcactttgt ttaattttat taatggcagc atcgttctca tccgataagc atatcatgga
4501 tcgagttacg atcgtaacaa tctctattcc ataaatatta acatctaaaa attttatcaa
4561 gaataatacc aaatcttcct cattagctcg cttgattgcc ctttcattat ttgcacataa
4621 tatccacaac aagctaactg ctcgaataaa tgtcactttt tcatctccaa cttcttttgg
4681 tttccaatcc aaatagtact gtctcagtaa tgcagcaagc ggagttataa tatcatcttt
4741 gattaaatca ttacacactt cttccctacc attttcagca atttcacgca aggtgtatgc
4801 agtatttgct cgtatagcag cgttatgatg aatcaaaagt ggaccaatga tttttgctat
4861 tccatcttta gcaatttgtt tggccataga aaagtcgcaa gacattgatg ccagtatttg
4921 cagggcagat aatttttcct cgagattact cgattgtata tcatcgtaaa cattctgcaa
4981 aatcttttcc ttctctcctt tcgcaaactg ctcgttcaat tcgaactcct tgacggacgg
5041 caatccagtg ggattttcct tgtgaggctt ttgccgctgc cgcttttgct tacccatcac
5101 tgcgaataat ttgataattg ttgttgagaa tagtaaaatt gtgttctctt tctagtttcc
5161 accgaatgat gagttaacgt ctttaatttc aagggcaggt tgaagacgct gtgtaatgtt
5221 tatatactgc ttagatagtt attctatttc ttctcttttc agtcgcacta tttacaatat
5281 ctattttctt cacaaaaatg tatttctcca gatttctcca aatgcaatac agcgtagagg
5341 ttaaacaaat gcacacatgg cctggcctag agatctagcc tggcctatcc aaataatttt
5401 attcacgaca tctttagtca attttgcgaa acttataatt agcgcgctgt attatagagt
5461 atacatacac acgtacatta tgtaaaattc cgaactttat tcagaatcac aaaagtggct
5521 ttcctggcag tctaaaggtt aataataatt aacatatatt atacatatgt atatattgtg
5581 tagtacatag atcgatcgaa ttgtttgtat cgacgttaca catgtaggtg cattattcgt
5641 tcgtaactta gttttctaca tagccaactg tgttaaatta cgatcgataa ttgtattatc
5701 tcgaccgatt cattttggtt tgtacaatta actggcggca agagggcgta tttgttgcaa
5761 aatttattag cgcgggattt gcttcgatga gagttatgtt acctttgatt acatcgtact
5821 atgttttttg cactaaagtt ttttgcatta aagatcaagt aaattacaca gtattagtat
5881 tagaagtgaa agcttgatgg aaaagaatga aagaagacga aaaagaagaa aatgaaaagg
5941 tgcaagcaat cgctccaacg atgaacaatt taaaggttga gcgttaataa ttggtgtcac
6001 ggaaggcagg tgcaagtttt gcagatggac cacccaccgc agcaaacctg ccgcgagtaa
6061 acatctcttc gagtttgagt gtgtgtcgac ggtatttctc tgatgtccct cagtgtccct
6121 atgcgtaccc cgcatacaac gtggctcgat aaagaaatca aaatcagcag ccaaagctta
6181 atagacgcag tctcagtgtg cgtgtgtgta tgtgcgccgc atcggctatt tggctgtgaa
6241 atgactggtt agttcttttt atcgaaggcc tcttaataaa cgagcccatg gcggatgcaa
6301 actaatatac gctgtatacg cgtgtggcgt gttaattatg tttcacgttt taatttcagt
6361 cgatcggggg aatctttctt tgtacaatca tcctcatatt cgtaccgcga atcttgatat
6421 gcgcccctca gctcagcgct gcatttcaat tgtgagtctt ctgactggtc tgataaatgg
6481 ctctcgttct atacatagtt gtgaaattac gaatctatat gcggtatcta tttctttcac
6541 tatgaaaatt ttagcgcatc gagaaatgaa tcaaagaatt agaaatgttt aaatttttct
6601 ataagttttg tttatcttga ttcttctaaa gaaacattca acaaagtgat atgtctcatc
6661 cttatgtatt cttttgtatt cttataaatc aaatcacttt aatcaagtta gtataaattt
6721 tctatcattt tttcccctct attctttctt cctctaattg taaatgattt gtttgactga
6781 ttacgtatat acatgtatgt atataatcaa tgtatataat caattgggca aatcgcttat
6841 aattaaagga attaaagaac aattaagaaa taaagagaaa aaatgataga aaattgatac
6901 tattaccaca taaacttctc aactcttcca ttttttcagc ttggataacc tgttgagatt
6961 tcttccatgg tgcaaactat accagcatag ttctgatgtt gcggaaagtt tgactcatcc
7021 ttgcactagc tttaaacagg actcagtggg acactgtgtg taccacaaaa tcagaatata
7081 aatctaacat gaaaccctcg cagcagggtt tgacttgatt cttaggagac agggatgaga
7141 atgtattttt ctctctcgct gcggtcttcc gctacatacg attgggattc ggccggatca
7201 gcaggagtcg ctagagtggg gatgaggcta tataatcttg gggtaggtcg ccaaagaaac
7261 aaattctcca aggaagacgt gcgtgcagtc gaatgcaacg cgacgcaaac cgtcatttgt
7321 tctgtgatac ctacaatcct tgaaggaggg atatactcaa gtaaatgcgc gtgttctatc
7381 attgcgcgtc ttatcattga tcgatacaag acgagagaaa aatggatgtt acaatgactt
7441 tatctgtcgt catcgttatt ttgtcaataa gtaagtatct atgcaccaga tgtgacatgc
7501 atgtaaaata taaagaaaga cagacagaca gacccc
//