LOCUS LA818283 4773 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c34339_g1_i7.
ACCESSION LA818283
VERSION LA818283.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 4773)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4773
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c34339_g1_i7"
/organism="Monomorium pharaonis"
BASE COUNT 1208 a 1212 c 1161 g 1192 t
ORIGIN
1 ggcggcggca gtgacggtgg tggcgacggt agttcgctcg ctcgttcggc acacagtcga
61 actccttcgc cactgaacga cggacggttc gtcgtcgccg tcgtcgtcct tatccacgag
121 agaccgggga ccatctcttg gtgcgatcac catgtcgtgc gtcatgatcg gcatcctgat
181 gatactcgcg tcgatcgcgc gcatttgcgc gggctgcccg ttctgcgcca ggcaacaatt
241 gcagcagttg cagctgcagc gttcgcagtc gcagcaattt taccggacga tcggcagccc
301 gagaccgttc ggtgtcgaca ggccgaaccg cgttcaggag ttcaaccgaa ccggcgtgtt
361 gcaccccgag taccaaatac cggcgaccat caggcccggc aacgtgtctc agttctatta
421 cctgaaccca cgggaaggtc cacctctcac gttactcgtt agcccgtgca gcggtccgat
481 atcctggacg gtcagttacg tagaaccgcc tggaaacgat caagatacag aagcgcaaac
541 gcgatggcct gtaaagaccc tgaagccggg atcgcctctc ttcatgtaca aaggcgcgga
601 ggaccaaaat ttcacgatac caaagacgcg ggccggtctt tactggttcg agatcaaatc
661 catggaaccc gcgggacagt cgccaggcac ggtactcctg tacgcgacct ccagcgccct
721 ggaccacata tcggacatgt acgttaacgg aaaggagcat cggcatcgca cgttgagatt
781 tcaacagcga cgaagtaaac ggcggctcac gatatcctgg ggcaagagcc atgtggatcc
841 tcacctctcg aactactgtt tagctgtcac ttcgggcacg cagccgcatc catcgacgct
901 ctgcgccgcg cagaacgttc tgaaagctta ttcgcactcg tcgccgagaa ccggctcttc
961 ctcgaaggag cattatcatc ggggcgttcc ggagggtctg tactgcgtgc ggcagaccaa
1021 gctgacgctt cacaggatgc gatacgacac tacgtacaac tttaccctat acgtggtgaa
1081 cactcgaaac aacgtctcca atcgagtcgc aaccgacgct atcaagttca agaagacgcc
1141 ggagctgacg ttgcgaactg gtcgttacac cacggccaat ctgcggaaga ctgacggttt
1201 cgtcaatttt cgctatcgtc caccggacaa cacttcaagc acctttcaca tactcccctg
1261 cggtggaggc atcgtgaagg cgaaattaag cggacaagga atactgcggg taaagcagcc
1321 agtgtttaca gaaagcaatg cggatgcatc gaccgcaagt tcgcgaaaga gtctattaac
1381 aattgacgca tgtcgcaagc gattggtcat cgtcctgtca ttaatcggaa tgctttcgcg
1441 acggcgtcgg tacgcgtata cgtgtgtaaa cgtgtctcgt gtgatcggca ggaaaaagaa
1501 gtggtcggat atgcctcgtt gcgcgtacct cctctacccc ccggtaagat gtacactcta
1561 cgtatatcgg ccacaccgca ggagctggtt cgagtatcca ccataaaagt gctggctacg
1621 caggagtcgt ccaccattta tccgcaaata ccgtccaaga acccaccgcg ggagtatcga
1681 tctctcagaa cgtgccacga agtgacgata ggcgtggaat cggccggtgc cgcgaaatat
1741 tgcattctgg tgaaggagct gcggagttca tcatccttgt cgagtgtcac gaccgtgccg
1801 gatcagtgcg gactccatcg gcgtcggcgg tccgagtaca cgttcgaggt gtgcgaggag
1861 aagccagact cgccgaagga tcgggcgctg acgttcactc tgagaagact gcaacccggc
1921 aaagcttatc tcctgcaggt cacggcacag ttgaaaggcc agtccttgtc ctatccgctg
1981 ttgggtgtgc gcacacgacg ttcctgcgta acgtaatccg catgattcct attaaacgaa
2041 gtgtaagatc gacgcgacag tagtctatag aagtaccgtt ggtgacttct atagaactgt
2101 ctgtcttctc atcaaataat gtatatcacg agagagacgt ctacaagatt tcaaagattg
2161 gacgtgcaag taatttatct taatagtgac gcgagtttca gagatctatc ggagtaagca
2221 aatcgtgtcg atgttttata taaatttttg ttaggttctc aaattttatt taggtaaata
2281 caaatggcga ccatttccga aacgaatttc gctcgataca tatctcttct tttattttcg
2341 catgtgaact ataatatttt atctcggtat ttgcttgcca acaaattgtg agaatactga
2401 gcgcaatgta aaaataatac acgcgacgaa aagttacttt tggatttatt tacgatcggt
2461 cgcagaggca cagacatcta gtctagattt tacgacacgt atcatacaag tttacatata
2521 cacacaaata gaacacacaa ccacatgcct gacatccgcg gtaaatgcga attgatcaca
2581 agcgtacatc aacgtatact ttgatatttg tataacggta tgtatacatt ttttatacat
2641 ttaagttttt tttatacgta ttcctttcat cctaaataag tacaatgaat atttttgcca
2701 tttttacgac tatctgtagt tgcgatagac aaactcgaga aaacgaataa acaaaaattt
2761 agacagacga gtaattatta ttcgcatagg ttggcgtgta ctttcttatt tgtaataaga
2821 aactgcaagg atccttccct gatttacata tcgaattgta taataacaga aatatacaac
2881 tgctgtcgcg tattacggtg agctaagatt agaattccac ttcgatgagt ctacggagtc
2941 tttcaccggg cgaattcggc ggttccgcct tcagcaacga ggacgctttg gcgagatggg
3001 tttgtctatc ttcgccggga catgtcgcga gctctcgtaa gatgaccgcc atgtaaagcg
3061 tcagacgagc accatacgga tctagtcggt ttactgtgtc catgacgcgt ttgcacaact
3121 ctggctttcg tggatcggtc gccggcagca gttgcatcag cgagtggctt acggatatgc
3181 aatgctgatg gccaggatgc agtagcaccg taagccgtga aagaagaacg gacagggtat
3241 gctcagttgc ctccttcata acttccgtga cctcttcctc cagtctatcc gtcaatagcg
3301 cgacttctgc ggatgtcact gttcctggac acgtgtcaca ggaccagtca gtatttggat
3361 ttaagggatc gttcggcagc atgagtccgt ttttgcaggg acagttcagg gtacctaaat
3421 gcgtgcccag ttccgtagga tctgtgcaac gcttgcagtg gcaagcaaaa tattttgtgg
3481 caaggagatg ctccctcctg gccctcgtgg accaaagtgc gtgcgtgtac atcgtgctca
3541 aatgttctcc tcttttaatt gacgtgaccg agtatactgt gatacgcggt ctgcctttgt
3601 tgtcgatacg aaaactatgt cgagtgttcg cgatacagga gtgctccaaa agagacgcgt
3661 tctcgtaaat tgccatcgag ccttccggcg gcgcggtctc caaggcattc acatcgatta
3721 agccacaaat aatcggcaga acgtccttac aatcggatgc cgtcgataaa aacggcccga
3781 gacgctggct catactcaac acttcatcgt aagcctccgt gccgggtcct cgcgactcca
3841 cgtgactctg cagattggcc agagatatcc aacgtcgtga ttttgcgcgc cacagtatca
3901 atatacgaat tattaagagc acctcgcatc tgggaacaat tctggcgcac gcaaggagac
3961 ggcactcctg ctgatgcctc ttcttatcgg acagcccttt gcaatcggac cggcacaccg
4021 gccagcaaca tccaccgcat ctcgcgtcaa cgttgttgca tttttcgccg caaccaacgc
4081 agattcgctg attcgcgtga gtcgatggcc cccacaccag aggcgcctcc gaaaggatca
4141 cgtctcccgg cgacaggtcc ctggtcgcca gcaagtgacg tccgagcgcg gggtcatgac
4201 ctatcttcca agcgccacac gtggacttgt gacgcggcca gtcctgagac tggtgcgact
4261 tgtcgcagta aaactctcgt ttgcagttgg cacacttcaa cgtggcgttc ttaccacaca
4321 ctgggcatac gccgtgcctc aaatcatcct ccatgattaa ttagcttcca agatcatcaa
4381 ccaattgaat ttaaactttg ctcatctagg tctagtacat taatttgaga gtcgagagaa
4441 tgaagttatg tcagatgatg aaaatgatat gtttattaaa ttttaataat ttattcaatt
4501 ttactccaac gatataatta gtcagattga actaatcgcg agaacatcgt tcactggccg
4561 gcaaacttta gcgtactgaa caaaccgaca tttgctaacg tggcggccac gtttaattat
4621 agatcggacg gtcgtgttac tattttcgta gaacgaaggg aatggagatt tttctactat
4681 cgcacatggt ctcatcgtac gtgctagtaa gcacgccaat acattcaaga aatttatgaa
4741 tttttaaatt gtggcatgta tttttaattt ttt
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