LOCUS LA817040 2380 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c33846_g1_i1.
ACCESSION LA817040
VERSION LA817040.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 2380)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2380
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c33846_g1_i1"
/organism="Monomorium pharaonis"
BASE COUNT 725 a 487 c 483 g 685 t
ORIGIN
1 gcggaacacg agagatcggc agcacagttt cgtgttcagc ttagctcggt tcggctctct
61 cagcttcgta gtatcggaaa gtactcaaag tactcgaaaa aggtcgaggt tcttgtacgc
121 cccgtactcc ctcgaacggt tccgcgcact tcgttagtgc ggagattgcg atttctctcc
181 acctttctcc gtccgctccg cgagagacgc gagattctta gtcgcccgag cggcgactag
241 aatacctgtt gctctctgcg ttgctcgcgc gaggagacag cggcgtgttg gtgcgcagtt
301 cgcgggcgaa acagcgacaa cgtacaggtg acgtgtacac cgaggaatca tggggacgat
361 atggcggctc tccacattaa tgctcttgtt aatgacgtat tctgctctgc tcagtgctca
421 tcgtgaacac aaggtccata acatcgtgtt gtatcctgat aagcacagtt ggtgcaagac
481 gacgcccata aagcaagtag tgacatggcc ccagtgttct tcacaggaat tggataataa
541 cgtatgcgtc ggcgcttgtt tctcatacat ggtaccccac agcgaacctt ccgcacccgg
601 tgatctcata agaccttatt gcgactcctg tcaacccctg gacagcgttt ggcataccgt
661 tacgctagat tgcaaagatg agcagaataa tccagtgacc atgcagaaga aggttcagat
721 tatcacaaat tgctcctgca gttcttgcat ggaaacttcg aagattaagc cagattacaa
781 caccctactg cagtcgctga cggaggagaa cttggacaag aatgtgaacg tggcgcacga
841 gacacccgac ttacttttgg atccgaactt aaacgcctcg aagaacacga cgagagatgg
901 agcgcaaacc aacgagcttc ttcaactcgt caagaaattc aaggttgatt cgaaactgga
961 tgaaaatgag aaaaaattgt tctctaagta cgatgaaaag attgatttgg aaaaactgaa
1021 ggagatgttg aagaagaaca gtcaagagga caaggaggac gagcacgagc atcatcatca
1081 gcatcaacac gagcaccagc atcaacatca acatcaacag cagcagcaac agcatcttca
1141 tcacggaccg catcactctc tggtgttgga ctcggacgtg aaggaaaaga tcgacgtgga
1201 gccgcattac ctgcatcccg ccgtcgccgg acaagagatc agttaccacg acaacatcct
1261 ggtcggtaaa gaaaagaaga aggacttcta gactcgtcga agcggaattc gtcgttgcac
1321 gagtgtcgcc ttcgttcgcc acgctcgaaa aaaatttgca gtagttagtt gagaaacgcg
1381 tatagatatt tttgataagc gaacgattag gatacctagt ccactatctg attttaattc
1441 tacgtattta tttacgtaac gataattggg tcgtgagata ttatttgttg atatatttat
1501 tgataattat ttttacaaaa ttacataata atgatttatt atacattttt acatgataat
1561 tgttgtacat ttttacatga aaattgttgt acaaagagag acaaaaatct ccttcatatt
1621 ttatatttta tagcttatcg tgaaaaaaaa aacttttaaa aatgacatgc aagttaaaaa
1681 taaatgcaat ccctgtattt tgaaattaat tctgtctatt gaaaatgaaa aggtaaaatc
1741 ggaagagcgt gcgtgagaga gtgaaaagat tggaatggga gaaaaaattc taatatatat
1801 ttaattgtta ttatgttaat taattattta aatagttgca tgacaatcgg ggcgtttatt
1861 cgattttaag catacggagt gacgctttag tgagatttat atcccaatcg ataaaagtat
1921 atgaatgata ctctgaatat ccgtctcgat atgacatctg gcctctacgg cttgcattgt
1981 attattctcc ttagagaata aagatcatcg tggtcaacat tcacatcttc tcgatgatat
2041 tttgcaaaag ttcttccctc atctccatgg acattcttca tttacaggaa gcgtaactta
2101 tcgttaagaa taatatgcta catgacgtca ttcttagatc tttctaacac ataactttcc
2161 tttcttattt ctttgcattt attcttctta actattttac actgtgagaa cttttatatt
2221 gtctatcttc atacatctaa taaagataat cttactaaat ttccgtttta ctcatctcac
2281 ttgagatatt tgtagatcgt atgcaaagat aaatttaata tttattttaa aaaaacttta
2341 ttatttgtat tgtgtattta aacacacaca cacacacaca
//