LOCUS KX954122 1056 bp RNA linear VRL 12-OCT-2016 DEFINITION Zika virus strain Zika virus/Homo sapiens/Yucatan/9190916/2016 nonstructural polyprotein gene, partial cds. ACCESSION KX954122 VERSION KX954122.1 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense. REFERENCE 1 (bases 1 to 1056) AUTHORS Canche Pech,J.R., Lopez Diaz,R.I. and Garcia Gonzalez,I. TITLE Direct Submission JOURNAL Submitted (06-OCT-2016) Biologia Molecular, Biomedicos de Merida, Calle 15 #225E X28 y 30 Garcia Gineres, Merida, Yucatan 97000, Mexico COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1056 /organism="Zika virus" /mol_type="genomic RNA" /strain="Zika virus/Homo sapiens/Yucatan/9190916/2016" /isolation_source="urine and blood" /host="Homo sapiens" /db_xref="taxon:64320" /country="Mexico" /collection_date="19-Sep-2016" /collected_by="JOSE REYES CANCHE PECH" CDS <1..>1056 /note="NS1" /codon_start=1 /product="nonstructural polyprotein" /protein_id="AOV81593.1" /translation="DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAA AVKQAWEDGICGISSVSRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRAPQ RLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGF GVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLI EMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIR FEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGME IRPRKEPESNLVRSMVTA" BASE COUNT 309 a 214 c 319 g 214 t ORIGIN 1 gatgtggggt gctcggtgga cttctcaaag aaggagacga gatgcggcac aggggtgttc 61 gtctataacg acgttgaagc ctggagggac aggtacaagt accatcctga ctccccccgt 121 agattggcag cagctgtcaa gcaagcctgg gaagatggta tctgcgggat ctcctctgtt 181 tcaagaatgg aaaacatcat gtggagatca gtagaagggg agctcaacgc aatcctggaa 241 gagaatggag ttcaactgac ggtcgttgtg ggatctgtaa aaaaccccat gtggagagct 301 ccacagagat tgcccgtgcc tgtgaacgag ctgccccacg gctggaaggc ttgggggaaa 361 tcgtacttcg tcagagcagc aaagacaaat aacagctttg tcgtggatgg tgacacactg 421 aaggaatgcc cactcaaaca tagagcatgg aacagctttc ttgtggagga tcatgggttc 481 ggggtattcc acactagtgt ctggctcaag gttagagaag attattcatt agagtgtgat 541 ccagccgtta ttggaacagc tgttaaggga aaggaggctg tacacagtga tctaggctac 601 tggattgaga gtgagaagaa tgacacatgg aggctgaaga gggcccatct gatcgagatg 661 aaaacatgtg aatggccaaa gtcccacaca ttgtggacag atggaataga agagagtgat 721 ctgatcatac ccaagtcttt agctgggcca ctcagccatc acaataccag agagggctac 781 aggacccaaa tgaaagggcc atggcacagt gaagagcttg aaattcggtt tgaggaatgc 841 ccaggcacta aggtccacgt ggaggaaaca tgtggaacaa gaggaccatc tctgagatca 901 accactgcaa gcggaagggt gatcgaggaa tggtgctgca gggagtgcac aatgccccca 961 ctgtcgttcc gggctaaaga tggctgttgg tatggaatgg agataaggcc caggaaagaa 1021 ccagaaagca acttagtaag gtcaatggtg actgca //