LOCUS KU508481 10500 bp DNA linear VRT 14-MAR-2016
DEFINITION Allotetraploid Carassius auratus red var. x Cyprinus carpio clone
CCAT150B8.2 sequence, complete sequence.
ACCESSION KU508481
VERSION KU508481.1
KEYWORDS HTG.
SOURCE allotetraploid Carassius auratus red var. x Cyprinus carpio
ORGANISM allotetraploid Carassius auratus red var. x Cyprinus carpio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Cyprinoidei intergeneric hybrids.
REFERENCE 1 (bases 1 to 10500)
AUTHORS Ye,L.H., Chen,Y.Y. and Tang,J.X.
TITLE Changes of the polyploid genome of fish hybrid
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 10500)
AUTHORS Ye,L.H., Chen,Y.Y. and Tang,J.X.
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2016) Hunan Normal University, Life Science
College, 36 Lushan Road, Changsha, Hunan 410081, China
COMMENT ##Assembly-Data-START##
Assembly Method :: SOAPdenovo v. 2015
Sequencing Technology :: Illumina; PacBio
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..10500
/organism="allotetraploid Carassius auratus red var. x
Cyprinus carpio"
/mol_type="genomic DNA"
/db_xref="taxon:1095756"
/clone="CCAT150B8.2"
BASE COUNT 3446 a 1938 c 1841 g 3275 t
ORIGIN
1 tggtggcatt ttcttgaata ttggtagcca agatgatttt gtacccttcc aaattcattc
61 ttctactgcc ttcatacatt aagtcatcat taaattctgt ttcaaattct cctgcggact
121 gtagattgac agagcatcac ctcagctttc tggtggttgt tggtgatttt acagacatgt
181 attttagggt tcattttcac agcttttatg atttgtctgt catcaactac tgttgttttt
241 ctcagccaat caggtcattg gtggttgctg atgtcgccgg tagtttccaa actcttgatt
301 tctacatgcc ctttgttttc ctatagttct aattgacttc ctcttttctt ttagcatcca
361 aattccttgc ttttctttca gagtcggctt cctcgtcttc atcctggttt gtgtgtgtca
421 tcatcgaatg caaggcttag aatgcagaag caatggatat aactggtgag acacattccc
481 tgcttttaat atctgaagaa ttaatgcaac aggacacagc tgaacactta gaaagaccta
541 tgcggcaact cttccaatac ttatgctcac atcagatagg gagatgaaac tccaaaagtg
601 ctgatcttct tagctggtaa aacatctatg tgttgaatca cccaataata aaatgtgaca
661 ttctgtagtt ttgtctcata ttcatatttt aatcatattt acagatttct tgactccaca
721 gcaaacagaa caattttgtc tttactgttc caatacttat ggagggcact gtatacataa
781 tagagtgttt accattgatt aacagttccc tcaaggagaa attgtttttt tttgtttgtt
841 tgtttgtttg tttttacttc caaaacccaa ctgtagcact ctatagcctt aaaaacatta
901 cattaatagt aaaatacatg ttgctggttc tcagattgct gcccaatgag aaaccataat
961 tcaataacaa actacaaaga gaacgcaagc tgcatagttt taacctgtct aaacccttat
1021 gcaatttcaa agggtgttga gtccttttta atagaatgaa agtcaaatcc ctgtaagtgg
1081 accaaaaagt gaacagagtg aaaaagtaca cagttctttt agtattcatt cgatcttagt
1141 tctctgtgca cattagcact gacacattta gcgaatgctt ttattaaaag caactaacaa
1201 cagaacattg cttttggttc aactttagct attttttctt tgctcaaaac ataataataa
1261 taaacataat aattttacat tatttttggt tttgagaaaa ttaacgcatt ctataaattg
1321 aatataaaac tataccttga tatatacact agtgttaaaa agattggagt tggtaaggtt
1381 ttgtaatact tttgaaagaa gttctgtatg ctcaccaaag ctgcatttat ttgatcaaaa
1441 ataccataaa aaacagtaat attgtgaaat attattacaa tataaatgac ctgttttcta
1501 ttttaacata ttttaaaatg taatttattc ctgtgaaagt taagctgaat tttcaacagc
1561 cattactcca gtctttaagg tcacatgatc cttcagaaat catactaata ttctgatctg
1621 ttgaagaaac atttattatt attattatta ttattattat ttataataat aattattcat
1681 tatcaatgat gaaaaccttt ttaatttttt tttttttttt attaaactaa agttactaaa
1741 agaaactagt cttttatttt agtaaataag taaatacttt tggttctgta tgctcaacca
1801 aagctgacat tttatttgat acaaaaatac caataaaaaa cagtaatatt gtagaaatat
1861 tattacaata ataaatgacc ttgttttctt aattttaaca ttaattttta aaatagtaat
1921 ttattcctgt agaaagttaa gctgtaattt tcaacagcca ttactccagt ctttaaggtc
1981 acatgatcct tcagaaatca tactaatatt ctgatctgtt gaagaaacat ttattattat
2041 tattattatt attattattt ataataataa ttattcatta tcaatgatga aaacctttta
2101 attttttttt ttttttttat ttaaacaaag ttcaaaagaa cagcttttat ttgaaataga
2161 aatcttttgt aacaatataa atgccttgtt ttactttaga tcaatttaat gtgtccttgc
2221 tgaataaaat tattttcttg tttttaaact taccccaaac tttaaaactg tactgtattt
2281 tgatatgaaa acatgtattt agaggtaaac ttcagcaaac tgaatcatgt ttgtacaaaa
2341 aaaaaggtta attaaaatac atttttaatc tactgaaagc ctcatttaca caaaagtatt
2401 atatttctaa tgtaatttca tgactttcat gcagcattac aaggcggtcc agctaaaccc
2461 ttgagccttt gtttctgcag aacactgaag acctctgaga gtctctgagt agtttatata
2521 taatatgatc ctcattgtta tctccacaga aataaaataa gcggctcatc tccttctctg
2581 tatgtcatca ttacctctac ggttcacaat attataaacg aaccacacag cagcacagaa
2641 gccaactgta ctcatgtgta gaccagccct ctgagaagca cttttgggcc atttacacgc
2701 tgtcaaaatt ccagcaaata atttcagcaa agtgtaaaca caccataatt gtattatttt
2761 cttatttctt ttatttctgt ttcaatactt gttgctgtgt catttatttt tacataaata
2821 tgtaaaattc ttcatatgca aattaacaaa tatctggttt tgatatctgg tatgtctatg
2881 catttattaa atgaaaaaat aaattaataa attcttaatt tcttctactt ttcacaaagc
2941 acattgtttt gctcattaag aatatttgct aaccttttaa tcttcagtat aaaataataa
3001 acaatgataa attatttcac acccataatt ctttgttttt gatttgtcat attataattt
3061 aatcctttcc atgtattcta gtaatgtttt acagtgactg gtacccctcc actaaagaca
3121 aaaatgtgga aagagaaaag gagacagaga caaaaaaaaa aaggaaaaag ggaaagagag
3181 agagagagag agagagagag aggaagagag agagagagag agagagagag gatccactgc
3241 ttcattaatc atgttactta tgctgcacat tttgaaaaaa gcttaatcgg aaacctctta
3301 ataattaatt caacagtgag aacgctcaaa cacacacacc tgtctgaaca tgggactcca
3361 ccccagctca aaagtaattt accacggact cgcctaccat accaggccac cttgtgtttt
3421 accagatcta acagttgata gactgtttaa aatgtatttt ttgatgttcc accaaaaaaa
3481 aaaaaaaaaa agaagaaaga aagaaatact agttattttt tgaatgttcc accaaaaaaa
3541 aaaaaaaaaa aaagaaagaa agaaagaaat tcataaggtt tgaatttctt tgagggaata
3601 tttatgatgt aaattgtcat ttttgggaaa aaaatgtcca tttaaaggtg acatatgatg
3661 cgatttcatt tttttccttt ctctttggag tgtaacaagc tcttggtgca taaagatgat
3721 ctgtaaagtt gcaaagacaa atccaaatca aatccaaaga gatattcttt ataaaagtta
3781 agactcgtcc acacccccct gaaacggctc gttctaacat gcccccacat ctctacatca
3841 ctatgtggga agatttgcat aacgctgccc agatgttcac gcaaagaagg aaggcgtacc
3901 ttttattcta gttgtagtat tgttgttgcc gccaccacca tgccgtatag acactgtgtg
3961 tttcactgtg aaagcaaaac tactttgttt ggccttccaa aagaggacga tatccgcttc
4021 gtcgtgcctg gaaatacatc aactttgcac tgtgtttcac cagttgctcc ttcatagaat
4081 ccgccggctg tgccgttctc aagccgcccg cctctgctca ctcaagacag ccttcgctca
4141 ctctaggccg cagctcactc taggcatccg gcctccgctt gctcaaggcc acagtgtgtg
4201 atgctatttc gttgagaaag cgaaactact ttgtttggcc ttctaaaaga ggaaattact
4261 agaaatcatg tttatatcac gtttataatg ggttttatgt ttatgtctcg tcacttcggc
4321 tggacagggc atcacaatat gttaaggggc gtaacatttc cgtcacacgc ttgagtattc
4381 agccaatcaa aatgcactgt atagctggcc aatcagagca cacctcgctt ttcagatcga
4441 tgagccttgt aaaaatagac acgtttcaga aggcggggct tagaggagaa acaataatgt
4501 acagtatgtg gaaaataatg ttgttttttt tttaccttta aaccgcataa acacatttca
4561 ttacaccaaa tacacaaaat aatgttcttt ttagcagcat catatgaccc ttttaaatca
4621 aattgtaaaa atgttagtca gatcctcact gatgaacaaa ttgtctataa agaactgatc
4681 tgtacatctt gtagactaca gtaaatgatg ctctgactga aagaattact tgcaatattt
4741 gtcataatat gcaaagagaa aacatctaat ttcatttttg tcatagagtc aatttatcca
4801 tccatccatc tattctccaa atcgtttgga ctatgcaggt aaacacagtg gatagtgagt
4861 ccatcacagg gttgacaaaa gtatttgttt tattaaaata ataataaaaa aaaaacattt
4921 aatgtaagac atatttaata aggctggaaa attctcaatt caaattcgca aaggaaggca
4981 aaaggttaat ttttgatcct gcagactggg tggaaaaccc tgtggtacaa taaaatatct
5041 tgaccttctc cattagcttc gacagagctg gtccagcatg ccaatataaa atacagatgc
5101 acatgatgtc ataggccagc agattacctg tgcattgcag gattagctcc aacagcaatg
5161 ctcagccaca accacttgat ccgtcaaagg tcagaacact gactcagcta aatgtgtggc
5221 caacttcaac tgaacttgaa tcagaccaaa tggggcattc aatagaacgc caacaaaaac
5281 aatgaagcct gccacacagg tgcaagatga atcactacca gaagcgaggc tgctgctttt
5341 aacagaaccc aagtgctttg ctttgtcatc tcccttgtca ttctaaaccc tttttcagcc
5401 agtgctatgg ctcgggaata gcatgcctta tcccatttta taaagtatca catggataac
5461 tgtaaggtca tccactaagt aggggctatt ttaatgttct gactgagacc actggaccaa
5521 ttacttggtt gggaaggagg aaacacctga agttgaggca taaatttata tccagaaaca
5581 gccatgagtt ccatataata tatatggtca gtcttttgaa ggtggaagtg gtgtccaacc
5641 acaaccctgt tccaaaacat agtgtgttgc cctctacaac cttattcaca ctccaccaac
5701 agacactatc cagtgtcgat aatcaccgga ttacaatatg tcacttctca gacactccac
5761 aacccgacaa acactgaata aacatgttca atcagtgaaa atttgcaaca gatgcctaca
5821 ggggtaacac acagatccga caaaccctga tgaacgtgtc tgttggagtt agttggtgtc
5881 aatgcagtgt gaattagtcg taagtatcca aatgttcact gaaccgataa gtgactgatt
5941 tggaatgttc tacaaaggca gcaaaacaaa cagcattctg catgggtcaa cagatttcaa
6001 tatttgtttg tcaggtatga attcaggtaa attaggacac tttttgccaa tgagatacat
6061 ggagaaaatg tcccaattat cctgaattaa ccctagcatg ttgccaagct aatggcccaa
6121 tatggcacac ataaatatta ggaataaaaa taaaacaaaa ttttaaaaag ccatcataat
6181 taagttgctt accatttaac acagcctcca catctaaggt gctataatcg tgccctacaa
6241 cacagctccc taggttttgt aacagagcat gatatctgcc ctttccttga gtttcaacaa
6301 aagcttttcc cctatgtagt gtgtaacaga tcagcattgc ctttgcatga ctgaggtcat
6361 ttgaacaatc actgtttgtg cctttatcga ctttcctcca ataccaggta aaaatcacag
6421 ttggacaata agtccgcaca gcatgcctag atataatcta atttaattag gctctggggg
6481 catcctccca atttcattac gaaaggatag tgcaaactgc tttttggggc atgctctctt
6541 aaaggaagaa acatttccag caaccttgaa ctgtatataa tagccgataa atatctgaag
6601 cgagagtcac ccggtaagat aaaggagggt ttgatataat gaagtgtggt ttgagtaaac
6661 tacttttcaa tgatgccttt ccatctgcct gcactggtgc tgtaaactct tggctgcgat
6721 acactggatt agatggcaaa caatgattaa agattcacta aacagactgt ggaaagagcg
6781 gttttatcaa gcatcctaag agtgcttatg tcacaaccac actgatgact ctgctgtgta
6841 ttttgttttt tttttttaaa tatgtgataa gtgaaagagc ggtgttagaa aattaggaca
6901 cagtatcata cgatggacac aaccacactg atgactctgc tgtgtatgtt ttttttttta
6961 attaatgtga taagtgaaag agcggtgtga aaattaggac acagtatcat acgatggaga
7021 tatgaatgca agcactcaga gtaccacttt taaaataatc tctttgcagg gcaccgtgac
7081 attatcattc atctgatatg atgaatatgc agcttttgaa aataacactt tttctccatg
7141 aacacacctg gatgaagaga caaaaagatc tagtgcatat gtgctaggaa gttctttcag
7201 cttaaccctt tgatgcataa attattcatt aaattataag ttgttgtttt tttaatgaaa
7261 aaaaaagtaa aaaataaaat aaaaattatt taaaattgta ttttgagtta cacatctttc
7321 cactgcaata aataatggta aaagaagata ttcaaggagt agatgcttca agacttgcag
7381 ccatgttgta tttattttgt cataaataaa ataaacacag tgacgtataa agagctatgg
7441 tcatatagaa ttatgtttaa gggtcaaagg taaattattt atgatggttt agatgtatca
7501 aaacacccta aatggtttaa aatggtctgc tgtagtggat gtcatgcatc gaaaggtcac
7561 gttacataac aaaacaaggc tgtttaatgc atatatactt tttaaataat tgatcaaatt
7621 tcaaatggcg atacactatg ttttacctgt tggtcttaaa aaaaatattg ttgtcatgcg
7681 aaaggctaca gagctgcaat actctgcaga gaccttcttt gtttataaat actgtttttg
7741 gttataaaag acaatcttgc gataactgca tagttataat ttatattgtg tatgcattca
7801 aatatgatac ttgtaaccag aatctctttt ccgtgaagct cgtgtctagc attgagagca
7861 caaggggaaa acaatcttga cagatttgtc tgtgctccaa gctgacaatc tttgctttat
7921 ctcaatccaa tggtgaacag ggatttgctg caaatgaaca aaactcctgc aactagttca
7981 agactcattt atccccacat caagattcat taaatatcta ccctcattga tttagatttc
8041 tctaacagtg tcactcacaa ttgctactct ttaggcaaaa gcttacgtta tgcaagccat
8101 ataaggaaga caatgtgata ttcaagaaac ttgcaacatt cacaacttga agatagtggt
8161 tagaagttgc cagaacttta tgatataaca atagactgac tatgtttcag gaattaggat
8221 ggctattaaa atgagtttgc tactgaaaat aacaaagatg gtccaacaca aggtcacatg
8281 attatttcat ctgagtttag ctcaaaatgg tatataccct cctacacacc tcacatgtcc
8341 gtcttaataa tcacaatatc attaataggg cttgagctta ttcatactct tttggttcta
8401 tccaagcaca ccactggtac actacaccag tagaatacag gcaaccgaat tagaccatca
8461 actacaacaa cacgcgagtg aaacattcca acctcaacct gactagttcc cagttcaatt
8521 caacgcaata tttcgggaaa aatgctcgca tcgcatcaaa aacgtgtagc aacatcacgc
8581 gcgtggcgag atgcgctgac agattatagg atgctccgag agcgcaagtt ttattgtaca
8641 gctgctgcgt ctgtcttacc ttgctctgaa ttagcgtccc tcagtgtctg aacatttgag
8701 aatatatccc caaatcccag tatgacgagt aaggtgagga tatattcgga catcgttgct
8761 gagtgagggc gaaggccacc gcacttcttt tactgaagtc cgattccagc cctccggtag
8821 agcgccgtta ttcaggaatg acaagtgaaa tttgtctgca gagcgcaccg accctccttc
8881 actcctcgca ttcagatgga tttctaggcg cgcgcactca tgagcttgca ggcgacagta
8941 agtaagaagc gaagagagaa agagagagtg agatagagaa ggagagagac ggagggtgtg
9001 cggatagatg gggacaataa cgcactgtga ggttgacttt gatcggtttc caggcacctg
9061 acgtagcgca agggaagcag gggttcgtaa catggggaat gctctaatga aaaggaaaaa
9121 aaaaaaaaaa acaaccgggg gaaatggact ctaaatgaaa ggtaaaaaaa aaaaaaaaaa
9181 aaaaacctta acaagattca ctgaagagtt tggcgaagta gctcgggcaa cataatagtg
9241 gtaagcaatg tgcgaattgt tcgataacct tagagggaga ttttcgctgc gcagtttgtt
9301 gagattcgtc taaggcaaag ccaaattgtg tttttgccct gtttgaaatc gtgtaaatgg
9361 cacaaataca tgaaaagaac aaagacagaa attaaacaat gtttaatatt ttcaagttta
9421 taggaactca ggtacagaaa ccaaataatt acatgtaaaa tagcattgca tagtcttcac
9481 tgtataaatt aaatatagat tagttttaca aagtacaaag taattcggtc aagagcagag
9541 agtaattttt tactcattta atttattgta ttaaggacac cgacagcagc tagtaaatta
9601 ggagctgtca ctttcagagc caatgcatgc aatatggcgc acatccattt ttttctcaac
9661 tgtttatgtt cacttaagac ataaccgaca gtttttcgag gatactcacc aagatgggta
9721 tttcaacctg tcatagatag cacaggtacg tctgcaagat gtaggcctat gttaaagatc
9781 gcttcatctg tacaaacatc tgatagaggt ctttaagatg tcaattttac attcattcta
9841 aatcataaac atcgtaaaga catcttctaa acatctattt gacatctgaa atgtcctata
9901 gacttattgc agatgcgcaa acactaaaaa atacgtcttg cagatgtaaa tgcagtcgtc
9961 agatagacat ctcagtgatg gatattagct atcaggggtc cgttcaaaca caagaggagg
10021 cggaactcaa ttcggtgttc aagggctgtg agaggctctc tgtgtgctgt gttctttggc
10081 gtcttgtact tgaatgcttt aaaatccctt gaatgtttaa attggcaagg cttaaaaaca
10141 tgtgcaaatg ataagctttt gtgacgatgc ccagcagtgg cctgtcaact atcctgagca
10201 tcatttatgc tggcctgggc agttggttga aatcaccatg ggcccctata attgtcacca
10261 ccttttaccc cactagcgat ggccctgatc atctgagtga aaatacatgc tctaattttt
10321 gtagtttctg tcaggtttga gaatcacact taaatgtatt tagctgatta aataatatgt
10381 aggctacttt taaacccact aacaattagg ttggtttagg ccaggggtgt caactcaatt
10441 cgtggagggc tggagccctg cagaatttag attgaaccct aattaaacac acctgatcag
//