LOCUS KU232296 676 bp RNA linear VRL 10-FEB-2016 DEFINITION Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds. ACCESSION KU232296 VERSION KU232296.1 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense. REFERENCE 1 (bases 1 to 676) AUTHORS Pessoa,R. and Sanabani,S. TITLE Investigation into an Outbreak of Dengue-like Illness in Pernambuco, Brazil Revealed a Co-circulation of Zika, Chikungunya, and Dengue Virus Type 1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 676) AUTHORS Pessoa,R. and Sanabani,S. TITLE Direct Submission JOURNAL Submitted (03-DEC-2015) Virology, Instituto de Medicina Tropical, R. Doutor Eneias de Carvalho Aguiar, 470, Sao Paulo, SP 05403-000, Brazil COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..676 /organism="Zika virus" /mol_type="genomic RNA" /isolate="045ZV_PEBR15" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="25-May-2015" /note="type: Asiatic" CDS <1..>676 /codon_start=3 /product="NS5 protein" /protein_id="AME17081.1" /translation="GFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYAD DTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVM DIISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQ SNGWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEV PFCSHH" BASE COUNT 210 a 124 c 198 g 144 t ORIGIN 1 ttggattctt gaacgaggat cactggatgg ggagagagaa ctcaggaggt ggtgttgaag 61 ggctgggatt acaaagactc ggatatgtcc tagaagagat gagtcgcata ccaggaggaa 121 ggatgtatgc agatgacact gctggctggg acacccgcat cagcaggttt gatctggaga 181 atgaagctct aatcaccaac caaatggaga aagggcacag ggccttggca ttggccataa 241 tcaagtacac ataccaaaac aaagtggtaa aggtccttag accagctgaa aaagggaaaa 301 cagttatgga cattatttcg agacaagacc aaagggggag cggacaagtt gtcacttacg 361 ctcttaacac atttaccaac ctagtggtgc aactcattcg gaatatggag gctgaggaag 421 ttctagagat gcaagacttg tggctgctgc ggaggtcaga gaaagtgacc aactggttgc 481 agagcaacgg atgggatagg ctcaaacgaa tggcagtcag tggagatgat tgcgttgtga 541 agccaattga tgataggttt gcacatgccc tcaggttctt gaatgatatg ggaaaagtta 601 ggaaggacac acaagagtgg aaaccctcaa ctggatggga caactgggaa gaagttccgt 661 tttgctccca ccattt //