LOCUS KU232294 679 bp RNA linear VRL 10-FEB-2016 DEFINITION Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds. ACCESSION KU232294 VERSION KU232294.1 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense. REFERENCE 1 (bases 1 to 679) AUTHORS Pessoa,R. and Sanabani,S. TITLE Investigation into an Outbreak of Dengue-like Illness in Pernambuco, Brazil Revealed a Co-circulation of Zika, Chikungunya, and Dengue Virus Type 1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 679) AUTHORS Pessoa,R. and Sanabani,S. TITLE Direct Submission JOURNAL Submitted (03-DEC-2015) Virology, Instituto de Medicina Tropical, R. Doutor Eneias de Carvalho Aguiar, 470, Sao Paulo, SP 05403-000, Brazil COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..679 /organism="Zika virus" /mol_type="genomic RNA" /isolate="061ZV_PEBR15" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="25-May-2015" /note="type: Asiatic" CDS <1..>679 /codon_start=3 /product="NS5 protein" /protein_id="AME17079.1" /translation="ALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMY ADDTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKT VMDIISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNW LQSNGWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWE EVPFCSH" BASE COUNT 212 a 127 c 199 g 141 t ORIGIN 1 aagcccttgg attcttgaac gaggatcact ggatggggag agagaactca ggaggtggtg 61 ttgaagggct gggattacaa agactcggat atgtcctaga agagatgagt cgcataccag 121 gaggaaggat gtatgcagat gacactgctg gctgggacac ccgcatcagc aggtttgatc 181 tggagaatga agctctaatc accaaccaaa tggagaaagg gcacagggcc ttggcattgg 241 ccataatcaa gtacacatac caaaacaaag tggtaaaggt ccttagacca gctgaaaaag 301 ggaaaacagt tatggacatt atttcgagac aagaccaaag ggggagcgga caagttgtca 361 cttacgctct taacacattt accaacctag tggtgcaact cattcggaat atggaggctg 421 aggaagttct agagatgcaa gacttgtggc tgctgcggag gtcagagaaa gtgaccaact 481 ggttgcagag caacggatgg gataggctca aacgaatggc agtcagtgga gatgattgcg 541 ttgtgaagcc aattgatgat aggtttgcac atgccctcag gttcttgaat gatatgggaa 601 aagttaggaa ggacacacaa gagtggaaac cctcaactgg atgggacaac tgggaagaag 661 ttccgttttg ctcccacca //