LOCUS KU232292 682 bp RNA linear VRL 10-FEB-2016 DEFINITION Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds. ACCESSION KU232292 VERSION KU232292.1 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense. REFERENCE 1 (bases 1 to 682) AUTHORS Pessoa,R. and Sanabani,S. TITLE Investigation into an Outbreak of Dengue-like Illness in Pernambuco, Brazil Revealed a Co-circulation of Zika, Chikungunya, and Dengue Virus Type 1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 682) AUTHORS Pessoa,R. and Sanabani,S. TITLE Direct Submission JOURNAL Submitted (03-DEC-2015) Virology, Instituto de Medicina Tropical, R. Doutor Eneias de Carvalho Aguiar, 470, Sao Paulo, SP 05403-000, Brazil COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..682 /organism="Zika virus" /mol_type="genomic RNA" /isolate="054ZV_PEBR15" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="25-May-2015" /note="type: Asiatic" CDS <1..>682 /codon_start=3 /product="NS5 protein" /protein_id="AME17077.1" /translation="EALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRM YADDTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGK TVMDIISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTN WLQSNGWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNW EEVPFCSH" BASE COUNT 212 a 128 c 200 g 142 t ORIGIN 1 ttgaagccct tggattcttg aacgaggatc actggatggg gagagagaac tcaggaggtg 61 gtgttgaagg gctgggatta caaagactcg gatatgtcct agaagagatg agtcgcatac 121 caggaggaag gatgtatgca gatgacactg ctggctggga cacccgcatc agcaggtttg 181 atctggagaa tgaagctcta atcaccaacc aaatggagaa agggcacagg gccttggcat 241 tggccataat caagtacaca taccaaaaca aagtggtaaa ggtccttaga ccagctgaaa 301 aagggaaaac agttatggac attatttcga gacaagacca aagggggagc ggacaagttg 361 tcacttacgc tcttaacaca tttaccaacc tagtggtgca actcattcgg aatatggagg 421 ctgaggaagt tctagagatg caagacttgt ggctgctgcg gaggtcagag aaagtgacca 481 actggttgca gagcaacgga tgggataggc tcaaacgaat ggcagtcagt ggagatgatt 541 gcgtcgtgaa gccaattgat gataggtttg cacatgccct caggttcttg aatgatatgg 601 gaaaagttag gaaggacaca caagagtgga aaccctcaac tggatgggac aactgggaag 661 aagttccgtt ttgctcccac ca //