LOCUS KU232288 665 bp RNA linear VRL 10-FEB-2016 DEFINITION Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds. ACCESSION KU232288 VERSION KU232288.1 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense. REFERENCE 1 (bases 1 to 665) AUTHORS Pessoa,R. and Sanabani,S. TITLE Investigation into an Outbreak of Dengue-like Illness in Pernambuco, Brazil Revealed a Co-circulation of Zika, Chikungunya, and Dengue Virus Type 1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 665) AUTHORS Pessoa,R. and Sanabani,S. TITLE Direct Submission JOURNAL Submitted (03-DEC-2015) Virology, Instituto de Medicina Tropical, R. Doutor Eneias de Carvalho Aguiar, 470, Sao Paulo, SP 05403-000, Brazil COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..665 /organism="Zika virus" /mol_type="genomic RNA" /isolate="001ZV_PEBR15" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="25-May-2015" /note="type: Asiatic" CDS <1..>665 /codon_start=3 /product="NS5 protein" /protein_id="AME17073.1" /translation="LNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDT AGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDI ISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSN GWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPF CSH" BASE COUNT 208 a 123 c 196 g 138 t ORIGIN 1 tcttgaacga ggatcactgg atggggagag agaactcagg aggtggtgtt gaagggctgg 61 gattacaaag actcggatat gtcctagaag agatgagtcg cataccagga ggaaggatgt 121 atgcagatga cactgctggc tgggacaccc gcatcagcag gtttgatctg gagaatgaag 181 ctctaatcac caaccaaatg gagaaagggc acagggcctt ggcattggcc ataatcaagt 241 acacatacca aaacaaagtg gtaaaggtcc ttagaccagc tgaaaaaggg aaaacagtta 301 tggacattat ttcgagacaa gaccaaaggg ggagcggaca agttgtcact tacgctctta 361 acacatttac caacctagtg gtgcaactca ttcggaatat ggaggctgag gaagttctag 421 agatgcaaga cttgtggctg ctgcggaggt cagagaaagt gaccaactgg ttgcagagca 481 acggatggga taggctcaaa cgaatggcag tcagtggaga tgattgcgtt gtgaagccaa 541 ttgatgatag gtttgcacat gccctcaggt tcttgaatga tatgggaaaa gttaggaagg 601 acacacaaga gtggaaaccc tcaactggat gggacaactg ggaagaagtt ccgttttgct 661 cccac //