LOCUS KP784690 2289 bp mRNA linear PLN 12-JUL-2017
DEFINITION Barbarea vulgaris subsp. arcuata LUP5-G mRNA, complete cds.
ACCESSION KP784690
VERSION KP784690.1
KEYWORDS .
SOURCE Barbarea vulgaris subsp. arcuata
ORGANISM Barbarea vulgaris subsp. arcuata
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Cardamineae; Barbarea.
REFERENCE 1 (bases 1 to 2289)
AUTHORS Khakimov,B., Kuzina,V., Erthmann,P.O., Fukushima,E.O.,
Augustin,J.M., Olsen,C.E., Scholtalbers,J., Volpin,H.,
Andersen,S.B., Hauser,T.P., Muranaka,T. and Bak,S.
TITLE Identification and genome organization of saponin pathway genes
from a wild crucifer, and their use for transient production of
saponins in Nicotiana benthamiana
JOURNAL Plant J. 84 (3), 478-490 (2015)
PUBMED 26333142
REFERENCE 2 (bases 1 to 2289)
AUTHORS Erthmann,P., Poulsen,V.K., Augustin,Jm. and Bak,S.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2015) Plant and Environmental Sciences,
University of Copenhagen, Thorvaldsensvej 40, T122, Frederiksberg C
1871, Danmark
FEATURES Location/Qualifiers
source 1..2289
/organism="Barbarea vulgaris subsp. arcuata"
/mol_type="mRNA"
/sub_species="arcuata"
/db_xref="taxon:767412"
CDS 1..2289
/codon_start=1
/product="LUP5-G"
/protein_id="ALR73780.1"
/translation="MWRLKLGEGNGDDPYLFSSNNFVGRQTWEFDPKAGTLEERAAVE
EARRSFLVNRSRVKACSDLLWRMQFLKEAKFEQVIPPVKIEDAKDITYENATDSLRRG
VSFFSALQASDGHWPGEIAGPLFFLPPLVFCLYITGHLEEIFDEEHRKEMLRHVYCHQ
NEDGGWGLHVESKSIMFCTVLNYICLRMLGEGPNGGRDNACKRARQWILDRGGVTYIP
SWGKIWLSILGIYDWSGTNPMPPEIWLLPSFVPIHLAKTLCYCRMVYMPMSYLYGKRF
VGPITPLILQLREELHLQPYEAINWNKTRRLYAKEDMYFPHPLVQDLIWDTLHIFVEP
LLTHWPLNKLVREKALRLAMKHIHYEDENSHYITIGCVEKVLCMLACWIDDPNGDYFK
KHLARIPDYMWVAEDGMKMQSFGSQQWDTGFAVQAIIASDLSSETGDVLKRGHDYIKK
SQIRENPSGDFKSMYRHISKGAWTLSDRDHGWQVSDCTAEALKCCLLLSMMPAEVVGH
KMDPEQLYDSVNLLLSLQSANGGVTAWEPVRAYAWTELLNPTEFLANLVAEREYVECT
SSVVQALVLFQQLYPDHKTKKISRAIEKAVQFLENEQKPDGSWYGNWGVCFIYATWFA
LGGLAAAGKTYKTSQAMRKGVEFLLTTQKDDGGWGESYLSCPEQRYIPLEGNRSNLVQ
TAWAIMGLIHAGQAERDPIPLHRAAKLIINSQMENGDFPQQEIVGVFMRNCLLHYATF
RNTFPLWALAEYRKAAFVTHKH"
BASE COUNT 657 a 440 c 547 g 645 t
ORIGIN
1 atgtggaggt tgaagttagg agagggaaat ggagacgacc cttacttgtt cagcagcaac
61 aatttcgtcg gacgtcaaac atgggaattt gatcccaaag ccggcacact ggaggaacga
121 gccgccgttg aagaagctcg ccggagtttc ttggttaacc gttctcgtgt taaagcttgc
181 agtgatctct tgtggcgaat gcaatttttg aaagaggcaa aattcgaaca agtgatcccg
241 ccggtgaaga ttgaagacgc caaagacata acttatgaaa atgcgacgga ttcattacgg
301 agaggagttt cattcttctc agctttgcaa gcttccgatg gccactggcc aggagaaatc
361 gccggacctc tcttcttcct tcctccattg gtattttgtt tatatatcac aggacacctc
421 gaagagatat tcgatgaaga acatcgcaaa gagatgcttc gacatgtcta ttgtcatcag
481 aacgaagatg gtggatgggg attacacgtt gagagcaaga gcattatgtt ttgcaccgtg
541 ttgaattaca tatgcttacg tatgctcggt gaaggtccta atggaggacg agataacgca
601 tgtaaacgag ctagacaatg gattcttgat cgtggtggtg ttacctatat tccttcatgg
661 ggaaaaattt ggttatcgat acttggaatc tatgattggt ccggaaccaa tccaatgcct
721 cctgagattt ggttactacc ttcttttgtt cctatacact tagcgaaaac tttgtgctat
781 tgccgaatgg tttacatgcc aatgtcatat ctatatggga agagatttgt tggtccaata
841 acacctctta ttctacaact tcgtgaagaa cttcatttac aaccttatga agcaatcaac
901 tggaataaaa cgcggcgttt atatgctaag gaggatatgt attttcctca tcctttggtt
961 caagatttga tatgggacac tcttcacatc tttgtggagc cgttacttac tcattggccg
1021 ttaaacaagc ttgtgaggga aaaagctctt cggctagcaa tgaaacacat acattatgaa
1081 gatgaaaata gccattatat taccattgga tgtgttgaga aggtattgtg catgcttgct
1141 tgttggattg atgaccctaa tggggattac ttcaaaaagc atcttgctag aattccagat
1201 tacatgtggg tagccgaaga tggaatgaaa atgcagagct ttggaagtca acaatgggat
1261 acagggtttg cggttcaagc tataattgct agtgatctct ctagtgaaac cggcgatgta
1321 cttaagagag gacatgatta cattaagaaa tctcagatta gagagaatcc ttctggtgac
1381 tttaagagta tgtaccgtca catatccaaa ggagcatgga ctttatctga tcgagatcat
1441 ggatggcaag tttcagactg tacagctgaa gctttgaagt gttgcctgct gctttctatg
1501 atgccagctg aagttgttgg ccataaaatg gatcccgaac agctctatga ttctgttaat
1561 ctcttgctat ctttacagag tgcaaatgga ggtgtgactg catgggagcc tgtccgcgca
1621 tatgcatgga ctgaattgct taatcccaca gaatttctgg ctaatcttgt ggctgagcgt
1681 gagtacgtgg aatgtacctc atctgttgta caagctttgg ttctattcca gcaactctat
1741 ccagatcata agacaaaaaa gatcagcagg gccatcgaga aagcggtgca attcttagaa
1801 aacgaacaaa agccagatgg ttcatggtat ggaaattggg gtgtttgttt catatatgcg
1861 acatggtttg ctcttggtgg cctagcagct gctggtaaaa catataaaac tagccaggcg
1921 atgcgtaaag gtgttgagtt tttactcacg acacagaaag atgatggagg ttggggtgaa
1981 agctatctgt catgccctga acagagatac ataccattag aagggaatag atccaacctg
2041 gtgcaaaccg cttgggcaat aatggggttg attcacgccg gacaggccga gagagatcca
2101 atacctcttc accgtgctgc gaaacttatc atcaattcgc aaatggaaaa tggagatttc
2161 cctcaacagg aaatagtagg agtgttcatg aggaattgct tgttacacta tgcaaccttc
2221 agaaacactt tcccattatg ggcacttgcc gagtaccgaa aagctgcgtt cgtcactcat
2281 aaacattaa
//