LOCUS KP780812 4332 bp mRNA linear PLN 31-OCT-2016 DEFINITION Chlamydomonas reinhardtii COP1 mRNA, complete cds. ACCESSION KP780812 VERSION KP780812.1 KEYWORDS . SOURCE Chlamydomonas reinhardtii ORGANISM Chlamydomonas reinhardtii Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. REFERENCE 1 (bases 1 to 4332) AUTHORS Tilbrook,K., Dubois,M., Crocco,C.D., Yin,R., Chappuis,R., Allorent,G., Schmid-Siegert,E., Goldschmidt-Clermont,M. and Ulm,R. TITLE UV-B Perception and Acclimation in Chlamydomonas reinhardtii JOURNAL Plant Cell 28 (4), 966-983 (2016) PUBMED 27020958 REFERENCE 2 (bases 1 to 4332) AUTHORS Tilbrook,K. and Ulm,R. TITLE Direct Submission JOURNAL Submitted (14-FEB-2015) Department of Botany and Plant Biology, University of Geneva, 30, quai Ernest-Ansermet, Geneva CH-1211, Switzerland COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4332 /organism="Chlamydomonas reinhardtii" /mol_type="mRNA" /db_xref="taxon:3055" CDS 1..4332 /note="similar to Arabidopsis COP1; CrCOP1; CONSTITUTIVE PHOTOMORPHOGENIC 1" /codon_start=1 /product="COP1" /protein_id="AKS29687.1" /translation="MSVTTRVTDDDTAGLAGGPPLPLGLTLADVNCPICVETISDPFV TSCGHTFCYQCITTQLTHKNSCPSCGAYLTADHIYPNFLLNKILRKAATATAPTSTSL LDQVQRLLADCMGGPGQDAAVAGPHGATTGPPAATATAAAAVPGGGSASGSHGQGGGG GGGGGGASSRRADSLISGLMGGRGHGLLSSGHHSSYQSQQQQPQRLRLRLRDIDAVLE ALYDAREELERRESSDVLHLLLCFLQHAREQKSRQMAELRQQLASLEYDIMAVAGAAG PAVAESAPDGGAAAAGGAAAGTNAGAAQAPQELATGAAVAGAEQQPQQQQQQQEQQQQ QLGPEGANQEQERKEAEAEEESPAMLARSSSSWLQRAHPHLQPAAAAAAAAAANAGVV GDSTGVGDPGVGAAAAAAAASVQGQRRAPPVRRASLRLHTITPGGGISSVTVDTTTLM EPEHTAAALSEAVQHALAAARAGSAGGGGGGRTMSGGSVTMSGAAAGGVAGGRGRVAD EEADGESVGVGGKGALRVGAAALVSATAGATEDAAAAARPGPTPGPGPSSVAAAGFAA GGLRRGMPRCGSADNFQLLLGRSLGGAAAAADGSAALSGDGCAVGSGGTATGDDGGSA LSGAAYSSGGSGAAATATAAAAAAALAATASTPAMPPSRAQPKPAAVAAAATAAPGAG LGKRRTRDEDTDADDEDEMDARERRRGRGAAGAANGTVQLPPYAHTTAAMQPSQQSKQ PQAPVAHGQAGPRPAPAVQLPPAPAVAAAPIANAALVVAATRAPAQAAIAAGRRDKDK EEDEDGEEDEMDARERRIGRGRPPPFTAAASTAPATAVAPAGVNGQVAAAAATEPPAA GAVAAPDASDEDMAAVQAAKRQRMLSQFDVLERCYLQMRAARTSLSGGMGLPGDGSIG HPPAATGATTAMGAPPAAGSSLLLQPHVLQLQHQPELTQQPLSISPFGAPAAAAAAAA HALPAAAGATACGSVHPRRASVGVGGACGCAATEDDADLSTFGAVLAATTQYSRLEML AAIPRYGSERSGPGAGGVRGGGNAAASTGAAGVVPSGGLQILSSIEFDLEDNLFATAG VVPRILVYDYQALLAAAPHSRGGGGGGGGGDGSGSAGAIAAARPVLELTARTKMSCLS YSQGVRQHLLAADFQGGVALWDTVAGMQVQDYEAHERRVWGVDFSPASHHMFASGSDD GLVKVWSTQQAHSCMALELRGNVCAVEWHPTDPHLLAVGSALHCALVYDTRRPAAPLH TLLGHRKAVSYVRWLSGSRHELVTASTDSSLKLWSLAPPASSAAAVDALAADAAAGGA AAGGAAAAAAAASSFRSAGAELVRTFTGHMNERNFVGMCTDGVGDYIACGSESHEVFV YYRSLPQPALSYRFPTRPEFDRPHGAPPGHPAPHHFVTALQWRRNSPHLLAANSAGNV WLLGLQL" BASE COUNT 686 a 1462 c 1613 g 571 t ORIGIN 1 atgtcagtca ccactcgtgt tactgacgat gatacggccg ggctggctgg gggcccgccg 61 ctccccctcg gcctcacgct cgcggatgtc aactgcccca tctgcgtgga gacgatttcg 121 gacccgtttg tcacctcgtg cggccacacg ttctgttacc aatgcatcac aacacagctg 181 acacacaaga acagctgccc gtcgtgcggc gcgtacctca cagcagacca catctacccc 241 aacttcttgc tcaataagat cctgcgcaag gctgccaccg ccaccgcacc caccagcacc 301 tccctgctgg accaggtcca gcgcctgcta gccgactgca tgggcggtcc ggggcaggat 361 gcggcagtag ccgggccgca tggtgctaca actggcccgc cagcggctac agccacagca 421 gcagcggcag ttcccggcgg cggctcagcc tctggcagcc acggccaggg cggcggcggc 481 ggcggcggcg gcggcggcgc cagcagccgc cgggcggaca gcctcataag cgggttgatg 541 ggtgggcggg gacacgggct gttgtcgagc gggcatcaca gctcgtacca gagccagcag 601 cagcagccac agcggctgcg gctgcggctg cgagacattg acgccgtgct ggaggcgctg 661 tatgacgcgc gggaggagct ggagcggcgc gagagcagtg acgtgctgca cctgctgctg 721 tgcttcctgc agcacgccag ggaacagaag tcgcggcaga tggcagagct gcggcagcag 781 cttgcgagcc tggagtacga catcatggcc gtagcaggcg cggcggggcc ggcagtagca 841 gagtccgcac cggatggcgg cgcggcagct gctggcggcg cggcggcagg cacaaacgct 901 ggcgcagcac aggcgccaca ggagcttgct acaggtgcag ctgttgcagg tgcggagcag 961 cagccacagc agcagcagca gcagcaggag caacagcagc agcagttggg gccggaagga 1021 gcaaatcagg agcaggagcg gaaggaggcg gaggccgagg aggagtcgcc agctatgctg 1081 gcgcgctcga gcagcagctg gttgcaacgc gcgcacccgc acctccaacc ggctgctgct 1141 gcagcggcag cagcggctgc aaacgccggc gtagtcggtg acagcaccgg cgttggggac 1201 cccggcgtcg gggcggcagc tgcggcagcc gcggcgtcgg tgcagggcca gcggcgggcc 1261 ccgccggtgc ggcgcgcaag tctgcggctg cacacgatca cgccaggtgg cggcatcagt 1321 tccgtcactg tggacaccac tacactgatg gagccagagc acacggcggc ggcgctcagc 1381 gaggcagtgc aacacgcgct ggcggcggcg cgcgcgggca gcgccggcgg cggcggtggc 1441 ggccgtacca tgagcggcgg cagcgtcacg atgagcggtg cagctgcggg tggcgtggca 1501 ggcggccggg ggcgggtggc agacgaggag gcggatggcg aaagcgtggg cgtgggtggc 1561 aaaggagccc tccgggttgg cgcagcagcg ctggtgtcag cgacggcggg tgctactgag 1621 gacgctgcgg cagcggcgag gccggggcca acgccagggc cagggcccag ctcggtagct 1681 gcggccggct tcgcagcagg cggcttgcga cggggcatgc cgcgctgtgg tagtgctgac 1741 aacttccagc tgttgctggg ccggtcgctt gggggagcgg cagcggcagc agatggcagt 1801 gccgcgctgt ctggcgatgg atgtgcagtt ggcagcggcg gcaccgcgac tggcgacgac 1861 ggcggcagtg cgctgagcgg tgcggcgtac tcgtctgggg gcagcggtgc cgccgccaca 1921 gctactgcgg ctgcggctgc agctgccttg gcagccacag cttccacccc tgcgatgcct 1981 ccgtcacgag cccagccgaa gccggcggca gtggctgcag ctgctacagc cgcgccaggg 2041 gctgggctag gaaagcgcag gacgcgggat gaggacacgg atgctgatga cgaggatgag 2101 atggatgcaa gggagcggcg caggggccgc ggcgcggcag gcgccgccaa cggcactgtc 2161 cagctgcctc cctacgcaca cactacagct gccatgcagc catcccagca gtccaagcag 2221 ccacaggcgc cagtggcgca cgggcaggcg gggccccggc ccgcgcccgc ggtgcagctt 2281 ccgcccgcgc ctgcagtggc agcagctccc atcgcaaacg ccgcgcttgt ggtcgcggca 2341 acacgcgcgc ctgcacaagc agcgattgca gcaggccgaa gggacaagga caaggaggag 2401 gacgaggacg gggaggagga cgagatggat gcccgcgagc ggcggatagg tcgcggccgt 2461 ccgccgccct tcactgctgc agcttctaca gctcccgcta ctgccgtggc acctgccggt 2521 gtgaacgggc aagttgctgc agcggcggcc acggagccgc cagcagctgg ggcggtggcg 2581 gcgccggatg cgagcgacga agacatggcg gcggtgcagg cggcaaagcg gcaacgcatg 2641 ctgtcgcagt ttgacgtact ggagcgctgc taccttcaga tgcgggccgc gaggacttct 2701 ctgtcaggcg gcatggggct gccaggggac ggatcgatag ggcacccgcc cgccgccacc 2761 ggcgccacca cagccatggg cgcgcccccg gccgccggca gcagcctcct gctacagcca 2821 cacgtgctac agctgcagca tcagcctgag ctcacgcagc agccgctgtc catctcgccc 2881 ttcggcgccc ccgccgcagc ggcggcagcg gccgcgcacg cactgccggc tgccgccggc 2941 gccaccgcgt gcggcagcgt gcacccgcgc cgcgcgtccg tcggcgtcgg cggcgcctgc 3001 ggctgtgcgg caacggagga cgacgctgat ctctccacct tcggagccgt gctggcagcc 3061 acgacacaat acagtcgatt ggagatgctc gcagcaatcc cgcgatacgg gtctgagagg 3121 tcagggcccg gcgccggcgg cgtgcgtggc ggcggcaacg ccgcggcgtc tacgggcgcg 3181 gcgggtgttg tgccgtccgg cgggttgcag atcttgtcca gcattgagtt cgacttggag 3241 gacaacctgt ttgccacggc cggtgtggtg ccccggatcc tggtgtacga ctaccaggct 3301 ctgttggctg ctgcgccgca cagccgcggc ggcggcggcg gtggtggtgg tggcgacggc 3361 tcggggtctg cgggcgccat cgcggcggcg cgccccgtgc tggagctgac tgcccgcact 3421 aagatgagct gcctcagcta cagccaaggc gtacggcagc acctgctggc ggcggacttc 3481 caggggggcg tggcgctgtg ggacacggtg gcgggcatgc aggtccaaga ctacgaggca 3541 cacgagcggc gcgtgtgggg cgtggacttc tcgccggcgt cacaccatat gttcgccagc 3601 ggcagcgacg acggactggt caaggtgtgg tccacgcagc aggcccacag ctgcatggcg 3661 ctcgagctgc gcggcaacgt gtgcgccgtg gagtggcacc ccaccgaccc gcacctactg 3721 gcggtggggt ccgcgctgca ctgcgccctg gtgtacgaca cacgccgccc cgccgcgccg 3781 ctgcacaccc tgctgggcca ccgcaaggcc gtgtcgtacg tgcgctggct gtccggcagc 3841 cgacacgagc tcgtgaccgc ctccaccgac tcctccctca agctctggtc cctcgcgccg 3901 cccgcctcct ccgccgccgc ggtcgatgca ctggccgcag acgccgccgc cggcggcgca 3961 gccgccggag gcgcggcggc ggccgctgct gccgccagct cgttccgcag cgcgggggca 4021 gagctggtcc gcaccttcac cggccatatg aatgagcgca actttgtggg catgtgcacg 4081 gacggcgtgg gagactacat tgcctgcggc agtgagagcc acgaggtgtt cgtgtactac 4141 cgctcgctgc ctcagccggc gttgagctac cgcttcccca ccaggccgga gtttgaccgc 4201 ccgcacggtg cgccgcccgg gcaccccgcg ccgcaccact tcgtgacggc actgcagtgg 4261 cggcgcaaca gcccgcacct tctggctgcc aacagcgccg gaaacgtgtg gctgctaggg 4321 ctgcagctgt ag //