LOCUS KN549208 574610 bp DNA linear CON 15-DEC-2014
DEFINITION Oesophagostomum dentatum strain OD-Hann unplaced genomic scaffold
O_dentatum_1.0_Cont9, whole genome shotgun sequence.
ACCESSION KN549208 JOOK01000000
VERSION KN549208.1
DBLINK BioProject: PRJNA72579
BioSample: SAMN02866218
KEYWORDS WGS; HIGH_QUALITY_DRAFT.
SOURCE Oesophagostomum dentatum
ORGANISM Oesophagostomum dentatum
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Strongylidae;
Oesophagostomum.
REFERENCE 1 (bases 1 to 574610)
AUTHORS Mitreva,M.
TITLE Draft genome of the hookworm Oesophagostomum dentatum
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 574610)
AUTHORS Mitreva,M., Pepin,K.H., Abubucker,S., Martin,J., Minx,P.,
Warren,C., Palsikar,V.B., Zhang,X. and Wilson,R.K.
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2014) The Genome Institute, Washington University
School of Medicine, 4444 Forest Park, St. Louis, MO 63108, USA
COMMENT Oesophagostomum dentatum, a Nodule worm, infects various livestock
species and can also be found in humans. The larval stages invade
the large intestinal wall and cause granulomatous inflammatory
reactions. O. dentatum infects pigs in all production systems
worldwide. Due to the lack of effective immune reactions worm
burdens can be high and the parasite is found in pigs of all age
groups. O. dentatum can be cultivated in vitro in all life cycle
stages and serves as a model for strongylid nematodes which
constitute a group of parasites most closely related to C. elegans.
The sequenced strain (OD-Hann) was collected in Lower Saxony,
Germany, around 1990 by Prof. Dr. Arwid Daugschies, and is since
maintained in pigs, currently at the Institute of Parasitology,
Vetmeduni Vienna, Austria. Material for sequencing was obtained
from Prof Dr Anja Joachim (Anja.Joachim@vetmeduni.ac.at) of the
Vetmeduni Vienna where it has been maintained since 2003. Worm
isolation and extraction of nucleic acids was done by Prof Joachim
and coworkers at the Institute of Parasitology, Vetmeduni Vienna,
or the Genome Institute production team.
This assembly consists of fragments, 3kb and 8kb insert whole
genome shotgun libraries. The sequences were generating on the
Roch/454 platform and assembled using Newbler. To improve
scaffolding, in house tools CIGA (Cdna tool for Improving Genome
Assembly) and Pygap (Gap closure tool) were used to map 454 cDNA
reads using blat to the genomic assembly to link genomic contigs
based on cDNA evidence. Only joins confirmed by additional
independent data typing were accepted and used to close gaps,
followed by the Pyramid assembler using Illumina paired reads to
close gaps and extending contigs.
The repeat library was generated using Repeatmodeler (A. Smit, R.
Hubley http://www.systemsbiology.org/). The Ribosomal RNA genes
were identified using RNAmmer
((http://www.cbs.dtu.dk/cgi-bin/nph-sw_request?rnammer ) and
transfer RNA's were identified with tRNAscan-SE (Lowe and Eddy,
1997). Non-coding RNAs, such as microRNAs, were identified by
sequence homology search of the Rfam database
(http://selab.janelia.org/software.html). Repeats and predicted
RNA's were then masked using RepeatMasker (A. Smit, R. Hubley & P.
Green http://repeatmasker.org). Protein-coding genes were predicted
using a combination of ab initio programs Snap (I. Korf, 2004),
Fgenesh (Softberry, Corp) and Augustus (M. Stanke, et. Al 2008) and
the annotation pipeline tool Maker (M. Yandell et. al., 2007) which
aligns mRNA, EST and protein information from same species or
cross-species to aid in gene structure determination and
modifications. A consensus gene set from the above prediction
algorithms was generated, using a logical, hierarchical approach
developed at the Genome institute. Gene product naming was
determined by BER (JCVI: http://ber.sourceforge.net).
Our goal is to explore this WGS draft sequence of Oesophagostomum
dentatum to better define proteins involved in nematode parasitism
that impact health and disease and are relevant to both
host-parasite relationships and basic biological processes.
For information regarding this assembly or project, or any other
GSC genome project, please visit our Genome Groups web page
(http://genome.wustl.edu/genome_group_index.cgi) and email the
designated contact person. For specific questions regarding the
Oesophagostomum dentatum genome project contact Makedonka Mitreva
(mmitreva@genome.wustl.edu) at Washington University School of
Medicine. The National Human Genome Research Institute (NHGRI) of
the National Institutes of Health (NIH) provided funds for this
project.
##Genome-Assembly-Data-START##
Finishing Goal :: High-Quality Draft
Current Finishing Status :: High-Quality Draft
Assembly Method :: Newbler v. MapAsmResearch-10/14/2011
Assembly Name :: O_dentatum_10.0.ec.cg.pg
Genome Coverage :: 15.0x
Sequencing Technology :: LaRoche 454
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..574610
/organism="Oesophagostomum dentatum"
/mol_type="genomic DNA"
/submitter_seqid="O_dentatum_1.0_Cont9"
/strain="OD-Hann"
/db_xref="taxon:61180"
/chromosome="Unknown"
/lab_host="pig"
/country="Germany: Lower Saxony"
/collection_date="1990"
/collected_by="Arwid Daugschies"
assembly_gap 5191..7516
/estimated_length=2326
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(7605..13088)
/locus_tag="OESDEN_00292"
mRNA complement(join(7605..7706,7764..7904,7960..8040,
8095..8221,8319..8419,8481..8579,8629..8730,8866..8971,
9129..9260,9327..9406,9465..9632,9685..9975,10242..10316,
10370..10432,10482..10598,10730..10807,10867..11007,
12863..12976,13044..13088))
/locus_tag="OESDEN_00292"
/product="threonine--tRNA ligase"
CDS complement(join(7605..7706,7764..7904,7960..8040,
8095..8221,8319..8419,8481..8579,8629..8730,8866..8971,
9129..9260,9327..9406,9465..9632,9685..9975,10242..10316,
10370..10432,10482..10598,10730..10807,10867..11007,
12863..12976,13044..13088))
/locus_tag="OESDEN_00292"
/inference="protein motif:HMMPfam:IPR002314"
/inference="protein motif:HMMPfam:IPR004095"
/inference="protein motif:HMMPfam:IPR004154"
/inference="protein motif:HMMPfam:IPR012947"
/inference="protein motif:HMMTigr:IPR002320"
/note="KEGG: cbr:CBG03144 0. Cbr-trs-1; C. briggsae
CBR-TRS-1 protein; K01868 threonyl-tRNA synthetase"
/codon_start=1
/product="threonine--tRNA ligase"
/protein_id="KHJ99685.1"
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR002320"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004154"
/db_xref="InterPro:IPR012947"
/translation="MVADDLKENIPVAKEAKVSKAPTEMNPWPDFIQRRIEMWDRLMA
EYKAEIAAKKPTPIKITLPDGKQFDGEAWRTTPFQVAEKISKGLADATVISKVNGEVW
DLDRPLESDCTLHLLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYGPPIQEGFYY
DMWHDNCTISQEDFPKLDQIVKCAVKDKQPFERLEMSKEDLLEMFKYNEFKVRIIKEK
IDTPKTTVYRCGPLIDLCRGPHVRHTGKIKVYKFHSFSSNTVIRPLFKAMQITKSSSS
YWEGKADAESLQRIYGISFPDPKQLKEWQKIQEEAAKRDHRKLGRDQELFFFNPLSPG
SAFWYPKGAHIYNTLMNFIRKEYRKRGFTEVITPNMFNSKLWETSGHWQHYSQDMFRF
EVEKEQFGLKPMNCPGHCIMYSHMPRTYNELPMRYADFGVLHRNEMSGALTGLTRVRR
FQQDDAHIFCRKDQIGDEIRGCLDFLSYCYETVFGFTFKLNLATRPEGFLGEISTWNE
AEADLKEVLDESGRKWALNEGDGAFYGPKIDITIQDALRRYHQCATIQLDFQLPQRFD
LSYFDEKGEKQRPVMIHRAVLGSVERMTAILTENYGGKWPFWLSPRQAKVITVHESVN
AYAREVKNRLYAEGFEVEFDEGCPDTLNKQIRNAQLAQFNFILVVGAKEKENGTVNVR
TRDNAVRGEVHLDALIAKFRRFAAEYTKDTESADEFAA"
assembly_gap 13951..15054
/estimated_length=1104
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 17083..18503
/estimated_length=1421
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 18620..22749
/locus_tag="OESDEN_00293"
mRNA join(18620..18732,19069..19200,19262..19331,20429..20527,
21019..21117,21249..21349,21427..21498,21555..21661,
22586..22749)
/locus_tag="OESDEN_00293"
/product="metallo-beta-lactamase domain protein"
CDS join(18620..18732,19069..19200,19262..19331,20429..20527,
21019..21117,21249..21349,21427..21498,21555..21661,
22586..22749)
/locus_tag="OESDEN_00293"
/inference="protein motif:HMMPfam:IPR001279"
/note="KEGG: dme:Dmel_CG12375 1.3e-50 CG12375 gene product
from transcript CG12375-RA"
/codon_start=1
/product="metallo-beta-lactamase domain protein"
/protein_id="KHJ99686.1"
/db_xref="InterPro:IPR001279"
/translation="MILDTMTSYFNGVTAALRFAKDYAIAAGAYVFASKTHTAMPTLT
PLDAVSRLSPLVTRILGQNPGPFTLQGTNTYLVGGGKKKILIDTGEPSISEYISLLKS
TLEEDRSEIDSIIITHWHNDHVGGIPGVVREVIGHEEDRSEIDSIIITHWHNDHVGGI
PGVVREVIGHEVPIYKIQRGTAEDPSRFHYVSEGHEIHVEGATLRFVQTPGHTADHTS
LYLEEEQTLFSGDCILGEGTTVFEDLHDYMKSLDKIKGMHPKRIYPGHGPVVEKCDEK
VDEYVKHRMQRENQIVDALRSLGEATSMDLTVLVYKVVAFSF"
assembly_gap 20541..20640
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 22751..22850
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 24725..24824
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 26961..27060
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 27862..27961
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(28451..32928)
/locus_tag="OESDEN_00294"
mRNA complement(join(28451..28751,28816..28879,28931..29016,
30098..30204,31547..31652,31722..31849,31909..31994,
32054..32114,32169..32257,32314..32408,32459..32553,
32881..32928))
/locus_tag="OESDEN_00294"
/product="peptidase family M13"
CDS complement(join(28451..28751,28816..28879,28931..29016,
30098..30204,31547..31652,31722..31849,31909..31994,
32054..32114,32169..32257,32314..32408,32459..32553,
32881..32928))
/locus_tag="OESDEN_00294"
/inference="protein motif:HMMPfam:IPR008753"
/inference="protein motif:HMMPfam:IPR018497"
/note="KEGG: cel:F18A12.8 5.6e-33 peptidase; hypothetical
protein; K01415 endothelin-converting enzyme"
/codon_start=1
/product="peptidase family M13"
/protein_id="KHJ99687.1"
/db_xref="InterPro:IPR008753"
/db_xref="InterPro:IPR018497"
/translation="MILVSGCYFPAFLLCLDDSDFLGGSFRNIAQREDYVAYVHRRGR
GVTRVGRRHTRRFDDQDDPAIECLDLVMAYMPYGPGYVYVKSQTNRADVVKDITHQTD
LVIANFQKMIGTLDWMTDDSKEAARNKSDSIFKNYGWPKDLYGDFKDSTTVDNYHIPD
YLPIIDAYNKNKTDYYTILNILKKGMENREAFRLLTEGADRWNFLQSPAMVNAWYQPE
RNSITFPYAAWNPPYYKRAFNLAGMAHSRTVRGINVDGWIPPRRVDSQTWHNACTQCC
PEKTGNVHCCNGATTQGENIADLGGQQAAYNAYQDYIKELGHDELRLPGLEQYSPNQI
FWITYGYSWCMKQSYNNLVNQACNFNFLKWRISNGKFQLLTNPHAPGSCRTNQVMQDI
PSFGKDFGCKQGSPMYPSPDQRCKVWVGN"
assembly_gap 33105..38567
/estimated_length=5463
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(39324..42380)
/locus_tag="OESDEN_00295"
mRNA complement(join(39324..39521,41229..41378,41436..41601,
41651..41733,41790..41948,42058..42138,42369..42380))
/locus_tag="OESDEN_00295"
/product="hypothetical protein"
CDS complement(join(39324..39521,41229..41378,41436..41601,
41651..41733,41790..41948,42058..42138,42369..42380))
/locus_tag="OESDEN_00295"
/inference="protein motif:HMMPfam:IPR008753"
/note="KEGG: bfo:BRAFLDRAFT_62750 8.0e-11 hypothetical
protein; K01415 endothelin-converting enzyme"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99688.1"
/db_xref="InterPro:IPR008753"
/translation="MVETQAAQYLLNGLDQSVDPCQDFYAFTCNKFIAQVNLTELGLP
RLGTYDQAQVDVNSQIATALKTVDINDAKTWSATERITKAAVDACVINSNLDSSLDNS
KQIYNDLIKWFGGVPFLGGKSTQDPAAIWGTVGLIEQSHALGTLLASWVSVDYKNVSQ
NALYVSQPSLSMPRDFYVLPQYVDKLNSRALAIAEMMMQFATDVVSDPLPYRQAIVQN
QKTLTVQASQDVANFEVQIAMASWPDDEMRFVGYTFKIFIILIEDHLNFVSNLYVEQL
IRLQKL"
assembly_gap 40370..41140
/estimated_length=771
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(42422..47238)
/locus_tag="OESDEN_00296"
mRNA complement(join(42422..42466,44024..44214,47235..47238))
/locus_tag="OESDEN_00296"
/product="hypothetical protein"
CDS complement(join(42422..42466,44024..44214,47235..47238))
/locus_tag="OESDEN_00296"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99689.1"
/translation="MVAVFVAVAVVIASLVLNIIILTRVSNINNNIPNNGSTPTPQPT
VDNGTTFCPNVGTASTSPAYKMGAYHSFDILEKQS"
assembly_gap 44758..45244
/estimated_length=487
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 48902..49665
/estimated_length=764
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 50235..50334
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(51062..52195)
/locus_tag="OESDEN_00297"
mRNA complement(join(51062..51211,51268..51367,51415..51478,
51615..51700,52056..52195))
/locus_tag="OESDEN_00297"
/product="peptidase family M13"
CDS complement(join(51062..51211,51268..51367,51415..51478,
51615..51700,52056..52195))
/locus_tag="OESDEN_00297"
/inference="protein motif:HMMPfam:IPR018497"
/note="KEGG: cel:F26G1.6 4.4e-24 Neprilysin; hypothetical
protein; K01389 neprilysin"
/codon_start=1
/product="peptidase family M13"
/protein_id="KHJ99690.1"
/db_xref="InterPro:IPR018497"
/translation="MSMRSLGVQFGADGSLSSCSWNECGWMDSKSKKAFRDMAQCVVT
QYNTQCCPEKSGMTQCANGVTTQGENIADLGGLQAAYRAYQEYKNTLQKEETRLPGLE
RFSPNQLFWITYGFGWCRTQTEENLINQLLTNPHSPSVCRVNQVVQDIPAFGRDFGCS
LGQKMYPAPEQRCSVWVEE"
gene complement(55639..56342)
/locus_tag="OESDEN_00298"
mRNA complement(join(55639..55747,55796..55897,55948..56078,
56145..56230,56285..56342))
/locus_tag="OESDEN_00298"
/product="hypothetical protein"
CDS complement(join(55639..55747,55796..55897,55948..56078,
56145..56230,56285..56342))
/locus_tag="OESDEN_00298"
/inference="protein motif:HMMPfam:IPR018497"
/note="KEGG: cel:F18A12.8 9.7e-18 peptidase; hypothetical
protein; K01415 endothelin-converting enzyme"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99691.1"
/db_xref="InterPro:IPR018497"
/translation="MISGLKSTTERTKTHAKEKAKGMVKNYGWPRELFGNLESGASID
PYHRPDYAGILTLFQQNGTHNYYRIRNTMIKGYSNRESLRLLTEPPKRYNFMMSPALV
NAWYIPERNSITFPYASFNPPFYNLKHPQAYNFAGQHTIAGHEIVHGFDDEGRRTLAF
K"
gene complement(60444..64424)
/locus_tag="OESDEN_00299"
mRNA complement(join(60444..60649,61687..61781,63665..63759,
63817..63921,63973..64108,64161..64228,64287..64424))
/locus_tag="OESDEN_00299"
/product="hypothetical protein"
CDS complement(join(60444..60649,61687..61781,63665..63759,
63817..63921,63973..64108,64161..64228,64287..64424))
/locus_tag="OESDEN_00299"
/inference="protein motif:HMMPfam:IPR008753"
/note="KEGG: str:Sterm_2476 8.8e-07 endothelin-converting
enzyme 1 K07386"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99692.1"
/db_xref="InterPro:IPR008753"
/translation="MPRDYYILPKFTTRLSKRQEAIFNAMHKLAFHILDDHEIYTKMI
QEAAQNVAELEMKIAMASWPDTQMRNFAQQYNAFNIAELKKAYPSIGWQSYLDKLLSR
VGSVDFTGSNRKLIITQPSYFGWLNALFSGDFDQKTIVNYMITQLIFEDADFLGGIFK
DVAESADYVPYAMRRGKGVARVGQQLTRTENSATDPNQPCINLMTQYMPYGTGFVYVK
SKGAEERTKVKEDVSAQTELVLKNFVVSLFPSEPQILFLKNTVDRVFSEEPSHQILTN
KCYL"
assembly_gap 64539..64701
/estimated_length=163
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(65053..>65407)
/locus_tag="OESDEN_00300"
mRNA complement(join(65053..65239,65325..>65407))
/locus_tag="OESDEN_00300"
/product="hypothetical protein"
CDS complement(join(65053..65239,65325..>65407))
/locus_tag="OESDEN_00300"
/inference="protein motif:HMMPfam:IPR008753"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99693.1"
/db_xref="InterPro:IPR008753"
/translation="LLQSCVYHTTSTTPIDNTLDFLLEVKSLFGGIPFINHTLPADFD
IFAAMGSLEQNHALGSLMGAMVSVDYKHVERHALYISQVKLSLVM"
assembly_gap 71694..72207
/estimated_length=514
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 72825..72924
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(78080..87813)
/locus_tag="OESDEN_00301"
mRNA complement(join(78080..78229,78291..78390,78451..78514,
78571..78656,79947..80067,80120..80202,80682..80819,
80865..80971,81032..81117,81169..81229,82109..82197,
82429..82529,83114..83208,83271..83378,83433..83565,
83621..83688,83756..83905,83957..84119,84180..84262,
84376..84531,84588..84668,85632..85966,87780..87813))
/locus_tag="OESDEN_00301"
/product="peptidase family M13"
CDS complement(join(78080..78229,78291..78390,78451..78514,
78571..78656,79947..80067,80120..80202,80682..80819,
80865..80971,81032..81117,81169..81229,82109..82197,
82429..82529,83114..83208,83271..83378,83433..83565,
83621..83688,83756..83905,83957..84119,84180..84262,
84376..84531,84588..84668,85632..85966,87780..87813))
/locus_tag="OESDEN_00301"
/inference="protein motif:HMMPfam:IPR008753"
/inference="protein motif:HMMPfam:IPR018497"
/note="KEGG: cel:F18A12.8 1.5e-77 peptidase; hypothetical
protein; K01415 endothelin-converting enzyme"
/codon_start=1
/product="peptidase family M13"
/protein_id="KHJ99694.1"
/db_xref="InterPro:IPR008753"
/db_xref="InterPro:IPR018497"
/translation="MLQAKLLGANTGLVGAICALAIASLVFNILIWNKVNKDDDVTKS
APIPVEPIPLEEVRIRTDPVTTTKDKPRTIAFPMKTRLRTISSTFTAANPTNSKPLPV
RVNDTIYCPSYGKPDTSDAYKEAASYLLSGLDQSVDPCEDFYAFSCNTYVKNHNASEI
GVSRVAAYDEAQQQVDVEIVEALQAVDIGDSSQSLTERLTKAALLECVYHSRARTPVD
NSKDVLIEMRDLFGGIPFLNHSLKEGLDFFSVMGELEQNHAMGSLLHAAVSVDFKNVQ
QHTLFISQPILPIPRDYYVLPQHTTVLEDRIKLVTKVLQSFAETVLDDASPYIDLIKT
SARDVVKLEMQIAMASWPESAMRNYAQQYNPYKLEQLEKAYPSIKWKSYFNAMLSTVS
STFDITKKNIIIAQPSYFGWLNALFTGETVDAKTIANYLLTHLIFEDADFMGGNIKTH
VMKSDYVRYALRKGKGATRIGVQQFPRIFRDSKDDPNIECLNTIMVYMPFGPGYVYVK
SKKNRDDVAKDIQHQTELVFKSFMKMIKELEWMSTNAQKLAAEKATKMIRNYGWPKDL
FGDFSNSQKVDAYHQTDYGDIINYYKTNSTHLYYKIRKTMLKGYSNRESFRTVVSFLN
RSFSRDQFLMSPAMVNAWYAPERNSITFPYAIWNPPYYNYGYPQAYNYGGQAGTGGHE
LVHGFDDQGVQFGADGSLSGCTWIECGWMEPEVKASFNNMAQCVVTQYSTQCCPAKSG
NIRCANGETTQGENIADIGGQLAAYYAYREYVKELGKEEMRLPGLEQYTPNQLFWISY
GFTWCMSQTESKLISQLLTDLHAPGSCRVNQVMQDIPEFAKDFGCTIGQNMYPLPEQR
CAVWVSE"
assembly_gap 79417..79624
/estimated_length=208
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 92825..93416
/estimated_length=592
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(97686..98802)
/locus_tag="OESDEN_00302"
mRNA complement(join(97686..97736,97789..97959,98188..98245,
98654..98802))
/locus_tag="OESDEN_00302"
/product="hypothetical protein"
CDS complement(join(97686..97736,97789..97959,98188..98245,
98654..98802))
/locus_tag="OESDEN_00302"
/note="KEGG: edi:EDI_251860 6.0e-09 KS1 protein precursor"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99695.1"
/translation="MKSLLILLVFVFAATFAFDPVFVDELREIVDDKKDAKELKKLDH
DDNMKRSEKKKKLDEILNKQPENIKKLYKIEVERSKLLHQIKMDKKLEKVTEQELKDH
LKKEEEINNDMNISEKEADKKKDELRSKLTSKQRKSLKKD"
gene complement(102194..107545)
/locus_tag="OESDEN_00303"
mRNA complement(join(102194..102319,103583..103681,
103740..103809,103860..103999,105024..105099,
105154..105260,105318..105419,105475..105560,
105618..105762,106602..106713,106770..106876,
106931..107063,107196..107332,107387..107545))
/locus_tag="OESDEN_00303"
/product="strabismus protein"
CDS complement(join(102194..102319,103583..103681,
103740..103809,103860..103999,105024..105099,
105154..105260,105318..105419,105475..105560,
105618..105762,106602..106713,106770..106876,
106931..107063,107196..107332,107387..107545))
/locus_tag="OESDEN_00303"
/inference="protein motif:HMMPfam:IPR009539"
/codon_start=1
/product="strabismus protein"
/protein_id="KHJ99696.1"
/db_xref="InterPro:IPR009539"
/translation="MSTVSAGGRRGPPKDFRGAARGDLRLMKPRGRGYSQSDVGEPFI
PRFSAVASEGVKMGLPPEEYGENTTVLTGMTSEHSYSGDDRPIYEPPMGRVMSRRCSR
LLWLSAAGLISLLALASAPLMCSLPFALTYLGYHYPQITCEVDCQGYLLLIAIKTLLL
VVALWALYWRRAAADLPRLYFARAALSFFVLFILFAFWLFYTVRIFLEKHSNYTYVVT
YALSLLDALLYTHYISVIVLELRRLRPEYIVTVVRDPDGESRTLSIGMMSLQEAAIQV
LRFHESFFPSYNVFLDKARQSSHRLRNSSQPPGFKMYDIEGLGSGTAEISQSNLRALM
EATSRRRSTNHNDILQEECEWERRIKKRKYRLIASAEEAFAQVQSIVDNQAGNKNLCD
AMDSTTAAQGVFACIMRPLNKYLRQTRQQPRHPAEAVTHHIERCLSMRLNYRTFLQRF
FSDRFPPKDIVSESKWSIISDEQASASIQHGTTFLLRSHNKDDDAGVQLLCTVSSLPF
FNLTEQSRTSNSKFALKIRNESSV"
assembly_gap 115940..116857
/estimated_length=918
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 117922..120514
/estimated_length=2593
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 121137..121236
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 122738..123824
/estimated_length=1087
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 135592..136026
/estimated_length=435
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 138904..139024
/estimated_length=121
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 147548..147893
/locus_tag="OESDEN_00304"
mRNA join(147548..147602,147658..147893)
/locus_tag="OESDEN_00304"
/product="ankyrin repeat protein"
CDS join(147548..147602,147658..147893)
/locus_tag="OESDEN_00304"
/inference="protein motif:HMMPfam:IPR002110"
/note="KEGG: isc:IscW_ISCW017062 1.2e-08 zinc finger
protein, putative"
/codon_start=1
/product="ankyrin repeat protein"
/protein_id="KHJ99697.1"
/db_xref="InterPro:IPR002110"
/translation="MVAFLVTNGAQVEKRDVEGFTPLHVAAQFGATPVVGYLVARGQS
VDAPDESRITPAMWAAAKVRAPANYYVLRVGKIGLVPVSARRSASTVDYSWC"
gene 154220..156148
/locus_tag="OESDEN_00305"
mRNA join(154220..154354,156095..156148)
/locus_tag="OESDEN_00305"
/product="hypothetical protein"
CDS join(154220..154354,156095..156148)
/locus_tag="OESDEN_00305"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99698.1"
/translation="MVISYDCHTAVSNPDGGYHQRTAEYPSLLSVPSRRTSARHSKSV
QQGNVPESSRLLLRRPPR"
assembly_gap 173013..173544
/estimated_length=532
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 175836..175935
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 182002..182616
/estimated_length=615
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 191474..191573
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 193541..198116
/locus_tag="OESDEN_00306"
mRNA join(193541..193645,195465..195609,195839..195982,
196406..196507,197204..197301,197994..198116)
/locus_tag="OESDEN_00306"
/product="hypothetical protein"
CDS join(193541..193645,195465..195609,195839..195982,
196406..196507,197204..197301,197994..198116)
/locus_tag="OESDEN_00306"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99699.1"
/translation="MWSSTILLSLSSVFGIIGLALVLAAALTDNWTEYQVNRREVINA
FNREPELNVRLKDAFVRNVNYFSRNYGLFQICFPDSVPSDIGSFSKYGSPCIDNTDYF
PAEAVQENYSSQQTQRLYFMRANVATYVLGLGVVVVCLAIAGIGCARQSRKAFMFTGV
GLLLTVLLFAVSMACWHYVNYLERAVLEMPPFYKSWEPILKSTTRFNFGWSLVVAWVG
ILFILFASVFFICSASRLKV"
assembly_gap 198370..198469
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 202841..203067
/locus_tag="OESDEN_00307"
mRNA join(202841..202901,202991..203067)
/locus_tag="OESDEN_00307"
/product="hypothetical protein"
CDS join(202841..202901,202991..203067)
/locus_tag="OESDEN_00307"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99700.1"
/translation="MMNNYYDKGAMVPYGYNTYAGYGNYPYGYGGQYNNGYYGYMTYG
R"
assembly_gap 204545..204644
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 213449..215626
/estimated_length=2178
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 219663..221552
/estimated_length=1890
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 225376..225475
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 228202..228301
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 232757..237285
/locus_tag="OESDEN_00308"
mRNA join(232757..232774,233329..233445,233505..233629,
233682..233760,233824..234004,235586..235697,
235753..235854,235924..236076,236136..236325,
236384..236454,236548..236619,236699..236813,
237157..237285)
/locus_tag="OESDEN_00308"
/product="hypothetical protein"
CDS join(232757..232774,233329..233445,233505..233629,
233682..233760,233824..234004,235586..235697,
235753..235854,235924..236076,236136..236325,
236384..236454,236548..236619,236699..236813,
237157..237285)
/locus_tag="OESDEN_00308"
/note="KEGG: nve:NEMVE_v1g229643 0.00064 hypothetical
protein; K03006 DNA-directed RNA polymerase II subunit A"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99701.1"
/translation="MFRPTNILIVRLFNKLLATAPSGTHRSLIRAEVALTKFSVEYVE
SLISAQSTPLGGMEILAEELALWRSLGTPPLPSYGVEHNHIYGLTETESDTLQSDRTR
LGRPPVNKYPANSTVLKNVERQRFKKQTGTGSGGRSSAPGYYPEGDRHSSNAFYPDRR
ALTLSNRTWQEASDASYSPPTLTRMGYATERRTPGGMRRAKSESAMLNSERAESPDSA
PRGLKRFTPQEQQLYHPIQHTRVMSRSVHDLSTRDDAAASTLTRPNSARPSTTRPQSR
TLTRRATTPPGHSPSRLESRIQVDESPPRARYASPSSPRARFAEPPIVEAQVPHAGFS
YLFPSQPVVSSVVPKRAVTPDPHARSIIRSHSPAPRLISPSPRPDYDTRSYVDNGQVV
YIPINMENSRHDKLSRYDRNDVGVYATESRTSSRAKLRSPSINGVIGEFCAVTHPSLG
GSSSDTFYENSQLLPTEALHEKLRTVDLAISIKADSE"
assembly_gap 234545..234644
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(238268..240082)
/locus_tag="OESDEN_00309"
mRNA complement(join(238268..238456,238763..238891,
238969..239629,239871..240082))
/locus_tag="OESDEN_00309"
/product="hypothetical protein"
CDS complement(join(238268..238456,238763..238891,
238969..239629,239871..240082))
/locus_tag="OESDEN_00309"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99702.1"
/translation="MEFRPEYGRPPPEFYRGVDYPDYRDFRESDYRDWPRHDFPQQRA
RSQSRLDPEYIPSEFPTYGRPLDKSYRSKSLDHRDAFRDDPSLFDDRRGVNIPIYRER
NERNYDYERELYTPFVRKEDRRDPALETSGRSAAYSREVDIPMKRMPRALTRSTEWLA
RRNYDDRPRNPRDVSRAEGYSPKSASSSKRYNLNISVDPARGRRDYGRSEEFVGYGRD
DGRDMYRDESRQMEGERGSSHKRQAHSSYHYESHGGGGAGFGSPSRRAITQQPMGPAP
PPGPGGYRPPIRHHREHLNVVVRIRCPHILLNDYYSEELLFVVYTTPLSYRCLIDVVE
APPALPIPPPSSKSGDVSMRNASITSLPFGFLIVISFYDVISATHVYRLEKKLIKSTY
LWFY"
assembly_gap 245400..245499
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 250683..250782
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 251330..251575
/estimated_length=246
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 257264..257363
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 258274..266699
/locus_tag="OESDEN_00310"
mRNA join(258274..258326,261161..261257,264343..264487,
264597..264724,264997..265107,265165..265251,
265300..265398,266643..266699)
/locus_tag="OESDEN_00310"
/product="O-methyltransferase"
CDS join(258274..258326,261161..261257,264343..264487,
264597..264724,264997..265107,265165..265251,
265300..265398,266643..266699)
/locus_tag="OESDEN_00310"
/inference="protein motif:HMMPfam:IPR002935"
/note="KEGG: ava:Ava_1652 4.0e-15 O-methyltransferase
family protein K00588"
/codon_start=1
/product="O-methyltransferase"
/protein_id="KHJ99703.1"
/db_xref="InterPro:IPR002935"
/translation="MRAGLLVLVTWLACTNALPGNLPGHHLSSKQSKQQRYCLPVDHR
RPVTHVETQKASIPAPLSWRSSIAPEVIQLTRTLMSLYQPSKCLVIGWSEHIIEGVFT
GLGLLGVAEQVESRGFVMALEHPSYVQFWENIGLESARTAGLSYALRIQLRSSEPIEK
ALPKLAANEPDNFDFILLDDLRRQNYLDDYEHAVRLLRPGGLLIINQALNNGGVLTGI
ELMNENDRVMSVMNIRIKDDGRVRASLLPFGGGTWIILKK"
assembly_gap 258880..260586
/estimated_length=1707
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 261791..262722
/estimated_length=932
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 263889..263988
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 268033..269145
/estimated_length=1113
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 270002..271309
/estimated_length=1308
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 272074..276687
/locus_tag="OESDEN_00311"
mRNA join(272074..272148,272520..272626,272793..272878,
273802..273918,273980..274068,274188..274319,
274393..274520,274616..274709,274925..275089,
275521..275605,275677..275822,275901..276117,
276641..276687)
/locus_tag="OESDEN_00311"
/product="zinc finger, C2H2 type"
CDS join(272074..272148,272520..272626,272793..272878,
273802..273918,273980..274068,274188..274319,
274393..274520,274616..274709,274925..275089,
275521..275605,275677..275822,275901..276117,
276641..276687)
/locus_tag="OESDEN_00311"
/note="KEGG: xla:397848 5.8e-13 prdm9, XFDL141; PR domain
containing 9"
/codon_start=1
/product="zinc finger, C2H2 type"
/protein_id="KHJ99704.1"
/translation="MAAFVPLTLNFDYSVPPPPIGCLIESPHCNGDVGAHSPATPSSF
QRKTVYKNGTIELTIIDDEPSPSVPYNSRDASDQPDEIVKNLSGIGDLVSTLRGEKTV
DKKRVILDSYGLDINRPHRPLPECRIAQVVQRIAFGDHQEPCDLPPPPPHPTDVVSVR
KLMRSKMIRCKRCKNRFIERNIYERHLRDRHPEDYTVYIEEQEAEMEQQRQEEIEANR
IEELQTGGFIPPESEIEASSFDVDVEGIPLPGENNGGVAPRFDQYGRLKQLKRPYKKK
ISPQCPFCDKRFRNEYSLKKHFVKKHAEMVEFKQCTRCFKCVKDDEEMENHLCELTFV
CFECTPIRNLCSDVRLLNHRKKFHRGANSGFKCNLCNLKFLTPRKLRKHKKMSHVFTK
TYQCHFCEEIFISEVAVMTHERIHTGMIKFECRICDYKANRFIHMDEHCKNEHGYICS
ICQEKTAEWSDMKHHTLVKHGGYLATEQNAGYIESPRVWVLFKGE"
gene 277089..280872
/locus_tag="OESDEN_00312"
mRNA join(277089..277205,277508..277594,277675..277791,
277844..277907,277963..278055,278157..278225,
278282..278371,278444..278602,278789..278867,
280213..280375,280774..280872)
/locus_tag="OESDEN_00312"
/product="kinase domain protein"
CDS join(277089..277205,277508..277594,277675..277791,
277844..277907,277963..278055,278157..278225,
278282..278371,278444..278602,278789..278867,
280213..280375,280774..280872)
/locus_tag="OESDEN_00312"
/inference="protein motif:HMMPfam:IPR017442"
/note="KEGG: hsa:23387 5.0e-82 SIK3, FLJ12240, KIAA0999,
QSK; SIK family kinase 3"
/codon_start=1
/product="kinase domain protein"
/protein_id="KHJ99705.1"
/db_xref="InterPro:IPR017442"
/translation="MRRLDARAAPRGTLFVKRRTSSVFCTIEMDGNPNRRLEKVGLYQ
VGRAIGRGNFATVRLARHDIAKTKVALKIVNRAALDEENLIRLEREMRILTRISHPHI
VKLYEIMRTDTSIYIVTEYCSGGELFEILIERGRTAEDEARRWFGQTASAVAYLHHKG
IVHRDLKAENILLDKSSNIKIIDFGFSNIQAPSQLLRTWCGSPPYAAPELLLGKEYDG
LKADIWSLGVILYILVTGGFPFPGDNVENLKRAVLSCQMKIPYWVSVECADLIKKMLV
FNPFKRCGINSVMQHRWLTNCESAKTHLLVKNSMLASATCIPERRSLKLNPTILLFMQ
QHGRWTEEQIVEEVLKQNFESPIFATYELLCDKVGKSSLEGTSI"
assembly_gap 281723..281822
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene <287674..294653
/locus_tag="OESDEN_00313"
mRNA join(<287674..287822,287873..287989,288056..288141,
288972..289188,290625..290766,290818..290949,
291922..292033,292667..292777,294535..294653)
/locus_tag="OESDEN_00313"
/product="hypothetical protein"
CDS join(<287674..287822,287873..287989,288056..288141,
288972..289188,290625..290766,290818..290949,
291922..292033,292667..292777,294535..294653)
/locus_tag="OESDEN_00313"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99706.1"
/translation="LFYKELLGERRASAGENLLNPGAIENLNHLVQPAPPSTAVPGSV
EEEGEGYLSKYSGKRNTVHGASSPYGPSSPVPRHSPYTKASSTERRSSWASPAITAQQ
HQQLERLYRQAISGSATSTVYNYPVSTELLKQILPTRLFCFVLSVVVYFDSQTKLWFP
TGGNDLMGIQALQKEFQRLGRIAAQGCSPTASRSPTHLFDHRAAPFGCPRISITDEHN
RSLAPGSSSFDPVNLFEQKVNEVVFGQRPATVIGFASTSKSGTSSPEQNIKVEDKDTM
DDRVKSFVSTLPLVDVVQELKNCLNEMQIRFEETNEVVYMDQAVIFAEMRRLSLSTGV
EIGCATLPPEQKSHVEFAIVAGNQVRVGQLWAGEEHITLVLTGMWIRLGNLKNYSPCL
QT"
assembly_gap 305600..305720
/estimated_length=121
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 306510..306609
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 324069..326119
/locus_tag="OESDEN_00314"
mRNA join(324069..324112,324333..324406,324800..324919,
325000..325093,325146..325292,325852..325951,
326048..326119)
/locus_tag="OESDEN_00314"
/product="HAD superfamily hydrolase, 5'-nucleotidase"
CDS join(324069..324112,324333..324406,324800..324919,
325000..325093,325146..325292,325852..325951,
326048..326119)
/locus_tag="OESDEN_00314"
/inference="protein motif:HMMPfam:IPR008380"
/note="KEGG: phu:Phum_PHUM227090 1.8e-60 Cytosolic purine
5'-nucleotidase, putative"
/codon_start=1
/product="HAD superfamily hydrolase, 5'-nucleotidase"
/protein_id="KHJ99707.1"
/db_xref="InterPro:IPR008380"
/translation="MVSDTILHKRIPEQRVFVNRSLRMEKINFFGFDMDYTLVQYKSP
DTEVLAFEMAIQRLIDIGYPEDIRKFKYDPIFPVRGLWFDYTYGNLLKVDGFGNILVG
MHGFKFLKTSEIEEMYPNKYLQLSESRVFVLNTLFNLPETHLLAYLIDYFDSHPDYTP
LEDKTGLRGGDVLMSYKSIFHDCRSAVDWVHLELSRNVASGVVFVASCTFPRKWNL"
gene 329418..333327
/locus_tag="OESDEN_00315"
mRNA join(329418..329552,329644..329751,329917..329992,
330063..330150,330719..330914,331043..331137,
332666..332838,333215..333327)
/locus_tag="OESDEN_00315"
/product="HAD superfamily hydrolase, 5'-nucleotidase"
CDS join(329418..329552,329644..329751,329917..329992,
330063..330150,330719..330914,331043..331137,
332666..332838,333215..333327)
/locus_tag="OESDEN_00315"
/inference="protein motif:HMMPfam:IPR008380"
/note="KEGG: ssc:100154612 1.2e-84 cytosolic IMP-GMP
specific 5-nucleotidase; K01081 5'-nucleotidase"
/codon_start=1
/product="HAD superfamily hydrolase, 5'-nucleotidase"
/protein_id="KHJ99708.1"
/db_xref="InterPro:IPR008380"
/translation="MKEKIMQNMDKYVMQDDRAALLLRQLREAGRQTFLLTNSDYRYT
DKMMSFVLGRDWRSYFNICVVDAKKPKWFAEGTVFREVDTNTGAVKLGFHTGPLKEGV
VYSGGSSDAFHKIVKARGKDVLYIGDHIFGDVLRSKKSRGWRTFLVVPELDHELTVWT
DRKPLFEQLSQLDNTLADIYKHLDATSMNKPQIHTILQQVKNLSHEMDQEYGVLGSLF
RAGSRTTFFACQVERYADLYASSCYNLVHYPSFYFFRAAMQLMPHESTVDHASVLKSS
KADLLKRQESVGQQVRGWTKKTANENEFCHEEEEDEQSISDGEASFSYLYR"
assembly_gap 332193..332292
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 333495..333943
/estimated_length=449
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 336577..336722
/estimated_length=146
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 342924..343766
/estimated_length=843
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 345482..349016
/locus_tag="OESDEN_00316"
mRNA join(345482..345537,345593..345760,346657..346923,
347064..347238,347294..347360,347767..347878,
348520..348660,348905..349016)
/locus_tag="OESDEN_00316"
/product="leucine Rich repeat-containing domain protein"
CDS join(345482..345537,345593..345760,346657..346923,
347064..347238,347294..347360,347767..347878,
348520..348660,348905..349016)
/locus_tag="OESDEN_00316"
/note="KEGG: phu:Phum_PHUM286780 8.6e-68 Ras suppressor
protein, putative"
/codon_start=1
/product="leucine Rich repeat-containing domain protein"
/protein_id="KHJ99709.1"
/translation="MLPTETHDASPYLPEQPSSSRHMDLNLEGLELDRVPRRHPVTGE
EYDPLLIRRLNLSKNNLEQIPCLPAFANVVSLDLSNNGLSALPEDIGTLSQLRNLIAR
NNLLEDLPKSLSCLENVETIYLSGNRFETVPTVLFNMHRVRILHLGGNRIENVPYAIG
SMLKLEILYLGGNLLRDVPATIGRLQRLSSLSLCDNQLETIPSTFGELRNLESLSLHN
NALKTLPTEIVKLRNLQQLSLRNNPLVHHFVHNMQLEPPKLKELAGRIVRLKMSRSPI
KELLPRELITYLNSANQCVNPKCKGVYFEACVEHVKFVDFCGKYRVPLLQFLCSPKCS
AATPAYISSDSSSDSEDELPRNMKMKKILLG"
assembly_gap 350325..350424
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 362679..363083
/estimated_length=405
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 364337..364560
/estimated_length=224
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 366050..366149
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 369013..369112
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 376586..376685
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 382073..389708
/locus_tag="OESDEN_00317"
mRNA join(382073..382165,382215..382295,384252..384401,
384495..384626,385581..385709,389526..389708)
/locus_tag="OESDEN_00317"
/product="PRELI-like family protein"
CDS join(382073..382165,382215..382295,384252..384401,
384495..384626,385581..385709,389526..389708)
/locus_tag="OESDEN_00317"
/inference="protein motif:HMMPfam:IPR006797"
/codon_start=1
/product="PRELI-like family protein"
/protein_id="KHJ99710.1"
/db_xref="InterPro:IPR006797"
/translation="MTFFIYIIIYTFDTPYQHPFRARITSITLFSARSLHNMVQTYQS
PVRVYKHPFELVMAAYEKRFPTCPQIPIFVGSEVTYEYNSEDGAEWVIERKCQLNVDA
PYLVKKIAGVDYVYFTQKNSLDRRKRTLLIEASNITFSSRIVVKENCHYYVHPDNPNW
TCFEQNAALDVKSFFGFEAAVEKLAVKQYAANLAKGKEILEYFIDELIKSGVTYVPQF
EDKDTGSTTDSAIDVSKEQADEETWVKCVPEGRVAAT"
assembly_gap 386467..386566
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 393376..398259
/locus_tag="OESDEN_00318"
mRNA join(393376..393531,394285..394416,394494..394556,
394745..394905,395294..395390,395460..395846,
395898..395993,396051..396107,397254..397310,
397371..397468,398142..398259)
/locus_tag="OESDEN_00318"
/product="CRAL/TRIO domain protein"
CDS join(393376..393531,394285..394416,394494..394556,
394745..394905,395294..395390,395460..395846,
395898..395993,396051..396107,397254..397310,
397371..397468,398142..398259)
/locus_tag="OESDEN_00318"
/inference="protein motif:HMMPfam:IPR001251"
/inference="protein motif:HMMPfam:IPR008273"
/note="KEGG: isc:IscW_ISCW023769 7.5e-26 retinal-binding
protein, putative"
/codon_start=1
/product="CRAL/TRIO domain protein"
/protein_id="KHJ99711.1"
/db_xref="InterPro:IPR001251"
/db_xref="InterPro:IPR008273"
/translation="MSFVSRFWTLIQCISAESKLEAEYIRRFLGQLSPLEESRLCELK
YGLQAHHKGKLPNDAHLLRFLRARDFDVGKAKDMVYNSIIWRKQHNVDRLLQDWSPPA
VMTQFFPGCWHHCDKQGRPLYLLRLGNLDMKGLLRSCGLENIVKLTLSVCEEGLIKTA
EATKQIGAPISTWCLLVDLEGLSMRHLWRPGVQSLLRIIEIVEAHYPETMGQVLIVRA
PRVFPVLWTLISPFIDDNTRNKFMINGGELVKEEISKYIDEQYIPDFLGRFSWYPKFS
SKGYDSENNLGGTCLPNCPAGGHIPKSSYRPVEGLPDDVLGSMYTTASVTRGYPIEAV
VPVSSPGCVLTWDFDILKSECEFVVYHTSKILQETVTPHSPTMLNPVEMGSHFCSRSG
TYILQWRIPEITGQHNSTFDFSIGAHKCKLMYYHELLDSADFRGSVASLESCRSSFSS
IAPPSHPGTPSSLARNKLHLKPN"
assembly_gap 396334..396831
/estimated_length=498
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(401050..405126)
/locus_tag="OESDEN_00319"
mRNA complement(join(401050..401196,401270..401327,
401711..401810,403088..403232,405073..405126))
/locus_tag="OESDEN_00319"
/product="hypothetical protein"
CDS complement(join(401050..401196,401270..401327,
401711..401810,403088..403232,405073..405126))
/locus_tag="OESDEN_00319"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99712.1"
/translation="MLTRLLFVAISVSAFPAKNGNDIMTLDLCRTLLEEEMCDRTMPV
LDGHYPVTKLDDRLVVRVNPAPRPHYGVHSEFLPYNCHVLRQREPTTEENAFVLAGCP
HKTNVAIYHSKVPVRIQFTMQDVLSEFLSQMSGNYTVKCVIGECSRKEGSTINVRPNY
FIMELKQ"
assembly_gap 403606..404051
/estimated_length=446
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 406956..407055
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 410591..412282
/estimated_length=1692
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 415941..417926
/estimated_length=1986
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 421223..421322
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 430956..432169
/estimated_length=1214
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 440235..440957
/estimated_length=723
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 441938..442609
/estimated_length=672
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 448264..448363
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 469458..469557
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 469668..472190
/locus_tag="OESDEN_00320"
mRNA join(469668..469766,469820..469960,470654..470788,
470840..470944,471008..471102,472097..472190)
/locus_tag="OESDEN_00320"
/product="hypothetical protein"
CDS join(469668..469766,469820..469960,470654..470788,
470840..470944,471008..471102,472097..472190)
/locus_tag="OESDEN_00320"
/inference="protein motif:HMMPfam:IPR013753"
/note="KEGG: phu:Phum_PHUM468090 7.7e-05 dexras1,
putative"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99713.1"
/db_xref="InterPro:IPR013753"
/translation="MSDLWQEICERRPDINSLPIVVAGNKCDLPSKKIFEATAKAFTS
RLSADVRYLEVSAKCNLRVTDIFRTLLELSGFPRCKAGGGALEDSPACTPTGDIDRDM
PLRRVNTARARPLSREPRGRPAEPERNGHPPAMDKQQTLPILAVPMNLGDLKRNRSLR
IKSPKKDKEKEQLERRPSDETCKLSRSASLIKRTKHLSLRMRRHGDKVGDDEIVDESD
CKIQ"
gene complement(473785..488042)
/locus_tag="OESDEN_00321"
mRNA complement(join(473785..473829,475081..475167,
475255..475344,482355..482453,482670..482744,
485546..485653,485708..485821,488001..488042))
/locus_tag="OESDEN_00321"
/product="tetraspanin family protein"
CDS complement(join(473785..473829,475081..475167,
475255..475344,482355..482453,482670..482744,
485546..485653,485708..485821,488001..488042))
/locus_tag="OESDEN_00321"
/inference="protein motif:HMMPfam:IPR018499"
/codon_start=1
/product="tetraspanin family protein"
/protein_id="KHJ99714.1"
/db_xref="InterPro:IPR018499"
/translation="MKENKLCLTAASTKLLGAALVGLSLWLRFDNGFLAKVISSIKID
VNNLPLESFYLILYIIIGFGAVLLILGFLGCCGSACEVICAIGLYFFFVLVLFIAEIV
GIVLYFVNKSSLRDNFVNLWRNELVNKYTTSQAIRDTLDNIQSQLRCCGASGCSDYIQ
YGSYPASCQCYNNQTQIGCATYIFQMLEGNLIYVIVVAAIVLLVEISQEDMRKRPKRK
L"
assembly_gap 476156..476908
/estimated_length=753
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 479995..480095
/estimated_length=101
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 491738..491837
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 503553..503652
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 504869..505949
/estimated_length=1081
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 508061..508160
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 514538..514637
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 516799..518460
/estimated_length=1662
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 519832..519941
/estimated_length=110
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(522154..536429)
/locus_tag="OESDEN_00322"
mRNA complement(join(522154..522200,522296..522414,
522484..522644,522741..523013,523082..523186,
523242..523370,523440..523548,523606..523733,
523835..523999,524071..524140,525091..525227,
525290..525439,525514..525627,525700..525795,
526169..526258,526311..526427,526501..526623,
526676..526828,527147..527305,527393..527507,
527618..527749,527856..528055,528115..528234,
528312..528437,528975..529073,529143..529238,
529520..529651,529712..529804,529863..529944,
530007..530108,530165..530349,530428..530609,
530665..530784,530845..531069,531300..531421,
531606..531784,531844..531920,531980..532075,
532132..532275,534190..534352,534466..534558,
534925..535045,535125..535152,535302..535458,
535524..535610,535699..535804,536293..536429))
/locus_tag="OESDEN_00322"
/product="myosin head"
CDS complement(join(522154..522200,522296..522414,
522484..522644,522741..523013,523082..523186,
523242..523370,523440..523548,523606..523733,
523835..523999,524071..524140,525091..525227,
525290..525439,525514..525627,525700..525795,
526169..526258,526311..526427,526501..526623,
526676..526828,527147..527305,527393..527507,
527618..527749,527856..528055,528115..528234,
528312..528437,528975..529073,529143..529238,
529520..529651,529712..529804,529863..529944,
530007..530108,530165..530349,530428..530609,
530665..530784,530845..531069,531300..531421,
531606..531784,531844..531920,531980..532075,
532132..532275,534190..534352,534466..534558,
534925..535045,535125..535152,535302..535458,
535524..535610,535699..535804,536293..536429))
/locus_tag="OESDEN_00322"
/inference="protein motif:HMMPfam:IPR001609"
/inference="protein motif:HMMPfam:IPR002928"
/inference="protein motif:HMMPfam:IPR004009"
/note="KEGG: dme:Dmel_CG15792 0. zip; zipper K10352"
/codon_start=1
/product="myosin head"
/protein_id="KHJ99715.1"
/db_xref="InterPro:IPR001609"
/db_xref="InterPro:IPR002928"
/db_xref="InterPro:IPR004009"
/translation="MEESDLRFLQVQRAAVADPARASEWAGKKLCWVPHEKDGFVAGS
IKKETNDEVIVEICDTGKTVTISKDDVQKANPPKFDKVEDMSELTYLNEASVLHNLKE
RYFSSLIYTYSGLFCVVINPYKRLPIYSESLIEEFKGKKRHEMPPHIFAIADSAYRSM
LQDREDQSILCTGESGAGKTENTKKVIQYLAHVAGATRSKGGPQGPAASPAKGELEHQ
LLQANPILEAFGNSKTVKNDNSSRFGKFIRINFDMSGYISGANIEFYLLEKSRTLRQA
PDERSFHIFYQFLRGTTPAEKANYLLEDIDKYRFLVNGNITLPNVDDAQEFQSTLKSM
RIMGFAEDEITSVLRVVSATILMGNFEFTQEKKSDQAILPDDRVIQKVCHLLGLQVIE
LTKAFLRPRIKVGREFVNKAQNKEQAEFAVEAIAKASYERMFKWLVNRINKSLDRTRR
QGASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNNTMFILEQEEYQREGIEWQ
FIDFGLDLQPTIDLIEKPMGLLALLDEQCLFPKATDKTLVEKLQKTHSKHPKFIVPDM
RAKSDFAVVHYAGRVDYSADQWLMKNMDPLNENVVALMQASTDPFVCGIWKDAEFAGI
CAAEMNETAFGVRAKKGMFRTVSQLHKEQLTRLMTTLRNTSPHFVRCIIPNHEKKAGK
INSMLVLEQLRCNGVLEGIRICRQGFPNRVPFQEFRHRYEILTPNVIPRGFMDGKESV
KKMIEYLEIDANLYRIGQSKVFFRTGVLAHLEEERDLKLTDLIIQFQAQCRAFLARRL
YVKRMQQSSAIRVLQRNGLAWMKLRNWQWWRLFTKVKPLLQVTNQEAAISAKEDELRV
VREKLDKVESEYKESLSKIDQVLAERNVLQDQLQQETDNNAELEEVKNRLQLKKNELE
EMVNEMRDRLVDEEQRTEKMSQEKKKLVETVRDLEEQLEQEEQARQKLQLDKANVDQR
VKNVETKLVDITDAHDKLLKEKRILEDKMNQLNLQLSEEEERVKQVARQRGKVEGHVQ
ELEQELLRERQIKSELEQQKRKLITELDDSRELLEEKRGKLEELNGQLMKREEELSQV
LTRSDEEAATIALLQKQIRDMQATIDELREDIETERAARNKAEMARREVVAQLEKVKG
DMLDKVDETSVLQDIMRRKEDEVRDLKKALETSTHTLENKLEEQKLKYNRQIEELHEK
IELQKKVNAQQEKYKHQADTERAELAQELANIQAQKAEADKRRKQQEVQFLDIQSQLA
ECDEHRLQVIEQLEKAREELEHISRAREDEEQLVSNLNRKIAALEEQLHELSDQVQEE
TRAKLAQINRVRQLEEEKAAVAEERDEMDAARQHLERDIGVLRQQLAEARKKADEGVI
QQMEELRKKAQRDLENTQHQLEESEASKERLIQSKKKLQQELEDANIELENIRTASRE
MEKRQKKFDMQLAEERANVQKAILERDAHAQESRDRETRILSLVNEIEQMKGTIDETE
RVRRMLQLELDESISSKDDVGKNVHELEKAKRQLEQTVQEQKATIEELEDQLGFAEDA
RLRLEVNIQALRAEQDRNLSAKDQEAEDKRRSLVKQLRDLEQELENERRSKAGAISQK
KKMEAHIAEIEQQLDVANRLKDEYNKQLKKNQQMIKEYQHDSEEARQMKEEIASQLRD
IERRLRSAEAENQRLSEANEMLTSQKRQLEQEKDELEELRGRGGSFSSEEKRRLEQKL
AQLEEELEEEQNNAEIAIDKQRKAQQQLEQLTTELSMERSVAQKSEAERQGLERQNRE
LKAKIAELESTAQSRARAQIAALEAKIQYLEEQNSVESQERHNATRQFRFVRAHISAH
SKMMVDCVLFRRIEKRLHDTILQLEDERRNVEQQKEIAEKCNLRAKQMRRQLDEQEEE
MTRERAKSRNLQREIDDLTEANDTLTRENNTLRGGAARRNRENMRLRSAYQIPGSSDN
LSRNDDEDGSIGTEVTGSDHTDELKKTSV"
assembly_gap 524570..524669
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 538887..538986
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 540235..540334
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 540916..541015
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 542304..542759
/estimated_length=456
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 551345..552591
/estimated_length=1247
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 554834..555927
/estimated_length=1094
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 557371..557558
/estimated_length=188
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 558798..562436
/estimated_length=3639
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 563065..566259
/locus_tag="OESDEN_00323"
mRNA join(563065..563118,564499..564643,564702..564792,
565974..566259)
/locus_tag="OESDEN_00323"
/product="hypothetical protein"
CDS join(563065..563118,564499..564643,564702..564792,
565974..566259)
/locus_tag="OESDEN_00323"
/codon_start=1
/product="hypothetical protein"
/protein_id="KHJ99716.1"
/translation="MYLAADAHSSQKNIFFMLDALSRHESVLWLNDDLEFLSRNLDEV
LNKSTSSITTIGREYTVADKSSAFVSYFPGTRASTKNFTLLLLQDGAQPALHWIAKCA
AEPQRRCWDCRDFADNLIDCMPGLLSRLSLDSRVQHIPLPINSVQHQRWQPPGCDARC
VAYTFVSIILFLLVAVALVLLMYSKATSKSK"
assembly_gap 564254..564353
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 569183..569282
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 569914..570537
/estimated_length=624
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CONTIG join(JOOK01132552.1:1..5190,gap(2326),JOOK01132563.1:1..6434,
gap(1104),JOOK01132574.1:1..2028,gap(1421),JOOK01132585.1:1..2037,
gap(100),JOOK01132596.1:1..2110,gap(100),JOOK01132607.1:1..1874,
gap(100),JOOK01132618.1:1..2136,gap(100),JOOK01132629.1:1..801,
gap(100),JOOK01132640.1:1..5143,gap(5463),JOOK01132553.1:1..1802,
gap(771),JOOK01132554.1:1..3617,gap(487),JOOK01132555.1:1..3657,
gap(764),JOOK01132556.1:1..569,gap(100),JOOK01132557.1:1..14204,
gap(163),JOOK01132558.1:1..6992,gap(514),JOOK01132559.1:1..617,
gap(100),JOOK01132560.1:1..6492,gap(208),JOOK01132561.1:1..13200,
gap(592),JOOK01132562.1:1..22523,gap(918),JOOK01132564.1:1..1064,
gap(2593),JOOK01132565.1:1..622,gap(100),JOOK01132566.1:1..1501,
gap(1087),JOOK01132567.1:1..11767,gap(435),JOOK01132568.1:1..2877,
gap(121),JOOK01132569.1:1..33988,gap(532),JOOK01132570.1:1..2291,
gap(100),JOOK01132571.1:1..6066,gap(615),JOOK01132572.1:1..8857,
gap(100),JOOK01132573.1:1..6796,gap(100),JOOK01132575.1:1..6075,
gap(100),JOOK01132576.1:1..8804,gap(2178),JOOK01132577.1:1..4036,
gap(1890),JOOK01132578.1:1..3823,gap(100),JOOK01132579.1:1..2726,
gap(100),JOOK01132580.1:1..6243,gap(100),JOOK01132581.1:1..10755,
gap(100),JOOK01132582.1:1..5183,gap(100),JOOK01132583.1:1..547,
gap(246),JOOK01132584.1:1..5688,gap(100),JOOK01132586.1:1..1516,
gap(1707),JOOK01132587.1:1..1204,gap(932),JOOK01132588.1:1..1166,
gap(100),JOOK01132589.1:1..4044,gap(1113),JOOK01132590.1:1..856,
gap(1308),JOOK01132591.1:1..10413,gap(100),JOOK01132592.1:1..23777,
gap(121),JOOK01132593.1:1..789,gap(100),JOOK01132594.1:1..25583,
gap(100),JOOK01132595.1:1..1202,gap(449),JOOK01132597.1:1..2633,
gap(146),JOOK01132598.1:1..6201,gap(843),JOOK01132599.1:1..6558,
gap(100),JOOK01132600.1:1..12254,gap(405),JOOK01132601.1:1..1253,
gap(224),JOOK01132602.1:1..1489,gap(100),JOOK01132603.1:1..2863,
gap(100),JOOK01132604.1:1..7473,gap(100),JOOK01132605.1:1..9781,
gap(100),JOOK01132606.1:1..9767,gap(498),JOOK01132608.1:1..6774,
gap(446),JOOK01132609.1:1..2904,gap(100),JOOK01132610.1:1..3535,
gap(1692),JOOK01132611.1:1..3658,gap(1986),JOOK01132612.1:1..3296,
gap(100),JOOK01132613.1:1..9633,gap(1214),JOOK01132614.1:1..8065,
gap(723),JOOK01132615.1:1..980,gap(672),JOOK01132616.1:1..5654,
gap(100),JOOK01132617.1:1..21094,gap(100),JOOK01132619.1:1..6598,
gap(753),JOOK01132620.1:1..3086,gap(101),JOOK01132621.1:1..11642,
gap(100),JOOK01132622.1:1..11715,gap(100),JOOK01132623.1:1..1216,
gap(1081),JOOK01132624.1:1..2111,gap(100),JOOK01132625.1:1..6377,
gap(100),JOOK01132626.1:1..2161,gap(1662),JOOK01132627.1:1..1371,
gap(110),JOOK01132628.1:1..4628,gap(100),JOOK01132630.1:1..14217,
gap(100),JOOK01132631.1:1..1248,gap(100),JOOK01132632.1:1..581,
gap(100),JOOK01132633.1:1..1288,gap(456),JOOK01132634.1:1..8585,
gap(1247),JOOK01132635.1:1..2242,gap(1094),JOOK01132636.1:1..1443,
gap(188),JOOK01132637.1:1..1239,gap(3639),JOOK01132638.1:1..1817,
gap(100),JOOK01132639.1:1..4829,gap(100),JOOK01132641.1:1..631,
gap(624),JOOK01132642.1:1..4073)
//