LOCUS KK037031 403243 bp DNA linear CON 11-FEB-2014 DEFINITION Saccharomyces cerevisiae R008 chromosome VII genomic scaffold scaffold11, whole genome shotgun sequence. ACCESSION KK037031 APIP01000000 VERSION KK037031.1 DBLINK BioProject: PRJNA162713 BioSample: SAMN01915092 KEYWORDS WGS. SOURCE Saccharomyces cerevisiae R008 ORGANISM Saccharomyces cerevisiae R008 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. REFERENCE 1 (bases 1 to 403243) AUTHORS Treu,L., Toniolo,C., Nadai,C., Sardu,A., Giacomini,A., Corich,V. and Campanaro,S. TITLE The impact of genomic variability on gene expression in environmental Saccharomyces cerevisiae strains JOURNAL Environ. Microbiol. (2013) In press PUBMED 24238297 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 403243) AUTHORS Campanaro,S., Treu,L. and Corich,V. TITLE Direct Submission JOURNAL Submitted (25-FEB-2013) Department of Biology, University of Padua, Via U. Bassi 58/b, Padova, PD 35121, Italia COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.3 Assembly Name :: R008 Genome Coverage :: 14.0x Sequencing Technology :: 454 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..403243 /organism="Saccharomyces cerevisiae R008" /mol_type="genomic DNA" /submitter_seqid="scaffold11" /strain="R008" /isolation_source="grape bunch from Raboso Piave vineyard" /db_xref="taxon:1182966" /chromosome="VII" /country="Italy: Tezze di Piave (TV)" /collection_date="Oct-2005" gene 83..147 /locus_tag="R008_G10001" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 1464..1961 /gene="Yps5" /locus_tag="R008_G10006" mRNA 1464..1961 /gene="Yps5" /locus_tag="R008_G10006" /product="Yps5p" CDS 1464..1961 /gene="Yps5" /locus_tag="R008_G10006" /note="Similar to YGL259W Protein with similarity to GPI-anchored aspartic proteases such as Yap1p and Yap3p" /codon_start=1 /product="Yps5p" /protein_id="EWG86148.1" /translation="MQLFSILSLLSSLMCSLTVLGSSASSYVKFPVQKFADIINIGTQ DVSTVFKRNEVLNTTVINGIGVYVVKMEIGTPPQTVYLQLDTGSSDMIVNNADIAYCK SMSDGSDYASTDNYELTATFTGPRSTTTSPELITLSALIGVNSMQETHLLLRITRLSS MTYTY" gene 2157..2389 /locus_tag="R008_G10011" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 4109..4729 /gene="Vel1" /locus_tag="R008_G10021" mRNA 4109..4729 /gene="Vel1" /locus_tag="R008_G10021" /product="Vel1p" CDS 4109..4729 /gene="Vel1" /locus_tag="R008_G10021" /note="Similar to YGL258W 'Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression in NAP1 deletion mutants'" /codon_start=1 /product="Vel1p" /protein_id="EWG86149.1" /translation="MSFLSIFTFFSVLVSVATAVRFDLTNVTCKGLHGPHCGTYVMEV VGQNGTFLGQSTFVGADVLTESAGDAWARYLGQETRFLPKLTTVASNETKNFSPLIFT TNINTCNPQSIGDAMVPFANTVTGEIEYNSWADTADNASFITGLANQLFNSTDYGVQV ASCYPSFASVILSTPTVNIFGKDDTLPDYCTAIQLKAVCPPEAGFD" gene complement(5488..7164) /gene="Mnt2" /locus_tag="R008_G10036" mRNA complement(5488..7164) /gene="Mnt2" /locus_tag="R008_G10036" /product="Mnt2p" CDS complement(5488..7164) /gene="Mnt2" /locus_tag="R008_G10036" /note="Similar to YGL257C Mannosyltransferase involved in adding the 4th and 5th mannose residues of O-linked glycans" /codon_start=1 /product="Mnt2p" /protein_id="EWG86150.1" /translation="MRRKNRLFILVVLLGIVLVVYYSQLNSLDLVEPVQSSSSGNGGC WSYYEGLTPGWLNDFYDVNQITPNPAKDVIELVTRIKIFFNCLQQVDGHNIQRLRDIE KKLFPYINFEKLETDESAFWHTTTRWNGEVYHASVLEFDPKNHQFLRSKPINFDTGLS FWENWLHTVTQSGSKGIVISASDVQLNETIRLLKVLRFIKNDYPIQIVHNADLSQDSM KSIIKYARSLDAAEYPAQELWFLNVHSLLNPKYSKKFTTYSNKWLALTFSSFETPILM DSDTVPFVSIEKFYELKEFQKTGVLFFKDRVISDDLFESSELEILREIIYGCIGLDLE DESKIHEQVEDPVVAQVLENMFIKKYKHHLESGLVVLHKGKHLFSMLTSIALQFSPIA EYFHGDKDFFWLGELLSNNRFTFHPVDASNIGRLGNVVSKENTGEFYQICSVQLSHTD RDGSLLWLNGGLNICKKASWEYDYEHRQRLNDMFQNADELREYYASPVELEGIIIPDT SISGWINSGECFLFNYCTLFKEGEFGKLIKFKEDEKHRLSQIVDIWNKDI" gene 7915..9312 /gene="Adh4" /locus_tag="R008_G10041" mRNA 7915..9312 /gene="Adh4" /locus_tag="R008_G10041" /product="Adh4p" CDS 7915..9312 /gene="Adh4" /locus_tag="R008_G10041" /note="Similar to YGL256W 'Alcohol dehydrogenase isoenzyme type IV, dimeric enzyme demonstrated to be zinc-dependent despite sequence similarity to iron-activated alcohol dehydrogenases; transcription is induced in response to zinc deficiency'" /codon_start=1 /product="Adh4p" /protein_id="EWG86151.1" /translation="MLGITYAVNSTKQLIFCCLKYLTLLGYILLSNRKKGQRTNMYKR VISISGLLKTGVKRFSSVYCKTTINNKFTFATTNSQIRKMSSVTGFYIPPISFFGEGA LEETADYIKSKDYKKALIVTDPGIAAIGLSGRVQKMLEERGLNVAIYDKTQPNPNIAN VTAGLKVLKEENSEIVVSIGGGSAHDNAKAIALLATNGGEIGDYEGVNQSKKAALPLF AINTTAGTASEMTRFTIISNEEKKIKMAIIDNNVTPAVAVNDPSTMFGLPPALTAATG LDALTHCIEAYVSTASNPITDACALKGIDLINESLVAAYKDGKDKKARTDMCYAEYLA GMAFNNASLGYVHALAHQLGGFYHLPHGVCNAVLLPHVQEANMQCPKAKKRLGEIALH CGASQEDPEETIKALHVLNRTMNIPRNLKDLGVKTEDFDILAEHAMHDACHLTNPVQF TKEQVVAIIKKAYEY" gene 13995..15119 /gene="Zrt1" /locus_tag="R008_G10071" mRNA 13995..15119 /gene="Zrt1" /locus_tag="R008_G10071" /product="Zrt1p" CDS 13995..15119 /gene="Zrt1" /locus_tag="R008_G10071" /note="Similar to YGL255W 'High-affinity zinc transporter of the plasma membrane, responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor'" /codon_start=1 /product="Zrt1p" /protein_id="EWG86152.1" /translation="MSNVTTPWWKQWDPDTVTLTAETPDDVWKTCVLQGVYFGENEYN GNLGARISSVFVILFVSTFFTMFPLISTKVKRLRIPLYAYLFAKYFGSGVIVATAFIH LMDPAYGAIGGNTCVGQTGNWGLYSWCPAIMLTSLTFTFLTDLFSSVWVERKYGLSHD HTNDEIKDTVVNNAAVVSTENENGTANGSHDTKNGTEYFEESDATSVDVVQSFQTQFY AFLILEFGVIFHSVMIGLNLGSTGKEFATLYPVLVFHQSFEGLGIGARLSAIEFPRSK RWWPWALCVAYGLTTPICVAIGLGVRTRYVSGSYTALVISGVLDAISAGILLYTGLVE LLARDFIFNPHRTKNLKELSFNVICTLFGAGIMALIGKWA" gene 15315..16214 /gene="Fzf1" /locus_tag="R008_G10081" mRNA 15315..16214 /gene="Fzf1" /locus_tag="R008_G10081" /product="Fzf1p" CDS 15315..16214 /gene="Fzf1" /locus_tag="R008_G10081" /note="Similar to YGL254W Transcription factor involved in sulfite metabolism, sole identified regulatory target is SSU1, overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers" /codon_start=1 /product="Fzf1p" /protein_id="EWG86153.1" /translation="MTDIGRTKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHC DEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSHERKSKLAS RIDRKHEGVNANVKAELDGKEGGFDPKLPSGSPMCGEEFSQGHLPGYDDMQVLQCPYK SCQKVTSFNDDLINHMLQHHIASKLVVPSGDPSLKESLPTSEKSSSTDTTSIPQLSFS TTGTSSSESIDSTTAQTPTDPESYWSDNRCKHSDCQELSPFASVFDLIDHYDHTHAFI PETLVKYSYIHLYKPSVWDLFEY" gene 16950..18410 /gene="Hxk2" /locus_tag="R008_G10086" mRNA 16950..18410 /gene="Hxk2" /locus_tag="R008_G10086" /product="Hxk2p" CDS 16950..18410 /gene="Hxk2" /locus_tag="R008_G10086" /note="Similar to YGL253W 'Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol; predominant hexokinase during growth on glucose; functions in the nucleus to repress expression of HXK1 and GLK1 and to induce expression of its own gene'" /codon_start=1 /product="Hxk2p" /protein_id="EWG86154.1" /translation="MVHLGPKKPQARKGSMADVPKELMQQIENFEKIFTVPTETLQAV TKHFISELEKGLSKKGGNIPMIPGWVMDFPTGKESGDFLAIDLGGTNLRVVLVKLGGD RTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQGISEPIPLGFTFSFP ASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITKRNIPIEVVALINDTTGTLVA SYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNE HVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLS KFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGINTTVQERKLIRRLSELIGARA ARLSVCGIAAICQKRGYKTGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYP IKIVPAEDGSGAGAAVIAALAQKRIAEGKSVGIIGA" gene complement(18730..20496) /gene="Rtg2" /locus_tag="R008_G10091" mRNA complement(18730..20496) /gene="Rtg2" /locus_tag="R008_G10091" /product="Rtg2p" CDS complement(18730..20496) /gene="Rtg2" /locus_tag="R008_G10091" /note="Similar to YGL252C 'Sensor of mitochondrial dysfunction; regulates the subcellular location of Rtg1p and Rtg3p, transcriptional activators of the retrograde (RTG) and TOR pathways; Rtg2p is inhibited by the phosphorylated form of Mks1p'" /codon_start=1 /product="Rtg2p" /protein_id="EWG86155.1" /translation="MSTLSDSDTETEVVSRNLCGIVDIGSNGIRFSISSKAAHHARIM PCVFKDRVGLSLYEVQYNTHTNAKCPIPRDIIKEVCSAMKRFKLICDDFGVPETSVRV IATEATRDAINADEFVNAVYGSTGWKVEILGQEDETRVGIYGVVSSFNTVRGLYLDVA GGSTQLSWVISSHGEVKQSSKPVSLPYGAGTLLRRMRTDDNRALFYEIKEAYKDAIEK IGIPQEMIDDAKKEGGFDLWTRGGGLRGMGHLLLYQSEGYPIQTIINGYACTYEEFSS MSDYLFLKQKIPGSSKEHKIFKVSDRRALQLPAVGLFMSAVFEAIPQIKAVHFSEGGV REGSLYSLLPKEIRAQDPLLIASRPYAPLLTEKYLYLLRKSIPQEDIPEIVNERIAPA LCNLAFVHASYPKELQPTAALHVATRGIIAGCHGLSHRARALIGIALCSRWGGNIPES EEKYSQELEQVVLREGDKAEALRIVWWTKYIGTIMYVICGVHPGGNIRDNVFDFHVSK RSEVETSLKELIIDDANTTKVKEESTRKNRGYEVVVRISKDDLKTSASVRSRIITLQK KVRKLSRGSVERVKIGVQFYEE" gene complement(20933..24648) /gene="Hfm1" /locus_tag="R008_G10101" mRNA complement(join(20933..24438,24591..24648)) /gene="Hfm1" /locus_tag="R008_G10101" /product="Hfm1p" CDS complement(join(20933..24438,24591..24648)) /gene="Hfm1" /locus_tag="R008_G10101" /note="Similar to YGL251C 'Meiosis specific DNA helicase involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity'" /codon_start=1 /product="Hfm1p" /protein_id="EWG86156.1" /translation="MKTKFDRLGTGKRSRPSPNNIDFNDQSATFKRNKKNSRQPSFKV GLSYNSLLDDCDDENETEEIFEGRGLQFFDKDDNFSITADDTQVTSKLFDHDLEQTPD EEAKKPKKVTIRKSAKKCLSTTILPDSFRGVFKFTEFNKMQSEAFPSIYESNENCIIS SPTGSGKTVLFELAILRLIKETNSDTNNTKIIYIAPTKSLCYEMYKNWFPSFVNLSVG MLTSDTSFLETEKAKKCNIIITTPEKWDLLTRRWSDYSRLFELVKLVLVDEIHTIKEK RGASLEVILTRMNTMCQNIRFVALSATVPNIEDLALWLKTNNELPANILSFDESYRQV QLTKFVYGYSFNCKNDFQKDAIYNSKLIEIIEKHADNRPVLIFCPTRASTISTAKFLL NNHIFSKSKKRCNHNPSDKILNECMQQGIAFHHAGISLEDRTAVEKEFLAGSINILCS TSTLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVIMT DSKMKQTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRF GKNPAAYQEVNRYVSFHSVEDSQINQFCQYLLDTLVKVKIIDISNGEYKSTAYGNAMT RHYISFESMKQFINAKKFLSLQGILNLLATSEEFSVMRVRHNEKKLFKEINLSPLLKY PFLTEKKQSQIIDRVSQKVSLLIQYELGGLEFPSYEGASKLHQTLVQDKFLVFRHCFR LLKCMVDTFIEKSDGTSLKNTLFLLRSLNGHCWENTPMVLRQLKTIGLVSVRRLIRHG ITNLEEMGHLSDTQIEYYLNLKIGNGIKIKNDISLLPCLNIRTKLENCKIENEELWLT FKVEISATFKSSIWHGQHLSLDIETEKSSGELIDFRRLQLNKLQSPRGFRISAKISPK LEKIEFSIHCQEIAGLGKTIVYSTDHLASQFSAKTPNIRKDLNSLEKCLFYESSSDGE VGKTSRVSHKDGLEESLSSDDSILDYLNERKKSSKAVESAAVIHPEAHSSSHFSNGRQ VRSNGNYECFHSCKDKTQCRHLCCKEGIPVKYIKEKGPSSIKPVSKPDQIRQPLLAKN INTTPHLEKRLNSKPKQWQEENTDIATVHTLPSKIYNLSQQMSSMEAGEQVLKSGPEN CPEIIPIDLESSDSYSSNTAASSISDPNGDLDFLGSDIEFE" gene 24922..25647 /gene="Rmr1" /locus_tag="R008_G10106" mRNA 24922..25647 /gene="Rmr1" /locus_tag="R008_G10106" /product="Rmr1p" CDS 24922..25647 /gene="Rmr1" /locus_tag="R008_G10106" /note="Similar to YGL250W 'Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus'" /codon_start=1 /product="Rmr1p" /protein_id="EWG86157.1" /translation="MSEEEAHKTVEVDDVGVQLDEGDEEDLLEYDDELVEEQPSDARI RNVAETLMKSELPKVTVEYKDTTFLLFTSDDKNESNNPIICENAALYQRPMGEFMESI RKFMGNRFGRLAFATKELVLQLKSLDLTLFEDNVYNNHISFSDVYTIFKILKERSESN FETDIPTHLAIELSTRPRFVSRYNALVELTESSATLKNIKPFSNDETHPLIVDDNDQY THQNTSEVIVMDIDDDVGEDSED" gene 26110..28224 /gene="Zip2" /locus_tag="R008_G10116" mRNA 26110..28224 /gene="Zip2" /locus_tag="R008_G10116" /product="Zip2p" CDS 26110..28224 /gene="Zip2" /locus_tag="R008_G10116" /note="Similar to YGL249W Meiosis-specific protein involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis" /codon_start=1 /product="Zip2p" /protein_id="EWG86158.1" /translation="MIIERWEVKLSKCNQNVGGYSVLSGNLKENIKLGRRAQKYLKEL RNLQLKPLKIGGYENCGTINGEEYFLEVIHITSGRQKIDVAVGKTWNVTNIENDIKEE LQYELFKEKLKVEKQDMLFFSWMKSLSVQLNAPLHQKMTEHGLADDNTRLEWFNIPLL RRSQYRKKVPYPSLRQMSSVLEVQCSTLTEEKLNFCVGFSDKPLSEWKPQIFEQTYNR YRLQRISPEKSFKYKSRCSKYNFKTSSQSWVVKVPEHDQQLNTFEKRYDELFDAQFNK LEFFKIRMKKLKKNKPIEKKNYKIWCLEKEDLKDLVWDPLKRICNHSRYAIFEHVTIN REAYSIKPLRLTFQKLDSGSLDLIDNQKKTFGSIKLAMSMPDVKKTENQSIEESERHD ETAIETQEFDENDCLSSKADINTSLAPQKRSFIDNELMSMLVTKKKIKKEKDVSDTGI SSTSYLINSGTYANSHIEIPTSNSVYNGKEDCSFNNYSVKHSILEEDIENKCIAVNEN KVIENQKVIQSLCKNSHLDLIEQPYFGECDFIINHSTCVYKIQASRFMQLRNNGSLHY DKAIDDLLTEFQRVIIIVEFSEIIQDVDPDLFWKIKLYLLNSRVDVFFIHETTDFFID WMKYFIARWAFSYNDEKEKNIANADILLDLGFNILLVRKIFQTYSLEEFFMAIIKEES KAVKMLTVSQMTRLKKLLTLEW" gene 28665..29774 /gene="Pde1" /locus_tag="R008_G10126" mRNA 28665..29774 /gene="Pde1" /locus_tag="R008_G10126" /product="Pde1p" CDS 28665..29774 /gene="Pde1" /locus_tag="R008_G10126" /note="Similar to YGL248W 'Low-affinity cyclic AMP phosphodiesterase, controls glucose and intracellular acidification-induced cAMP signaling, target of the cAMP-protein kinase A (PKA) pathway; glucose induces transcription and inhibits translation'" /codon_start=1 /product="Pde1p" /protein_id="EWG86159.1" /translation="MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGM YQLREMLVQGRNENEGDDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQG EHFESANTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPH TIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVK TGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAKNIPLVHLKGI LVECSCPLSSKPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKR DPRLTILEELRFLAEERNLGDLRISIALEGHTLFL" gene 29945..30538 /gene="Brr6" /locus_tag="R008_G10131" mRNA 29945..30538 /gene="Brr6" /locus_tag="R008_G10131" /product="Brr6p" CDS 29945..30538 /gene="Brr6" /locus_tag="R008_G10131" /note="Similar to YGL247W 'Essential nuclear envelope integral membrane protein required for nuclear envelope morphology, nuclear pore complex localization, nuclear export; exhibits synthetic lethal genetic interactions with genes involved in lipid metabolism'" /codon_start=1 /product="Brr6p" /protein_id="EWG86160.1" /translation="MELRSFSRQPDGILANPRLGREEVLEGEHPQDARLARQSIWLSP SLIAEYIQLFFNFIIGTIGLSLAIKFILMIRNDVNLKLEHNVREELDKIATCKSRYFE NQCEPHMRVPALEVRCNEWSKCMNKEIVSGSDYQWAKAWARTLAEVINAFFEAFSIRS FLFILISIIGIIFVTNTSFGSYRVYLNNKDTKSVRHA" gene complement(30629..31792) /gene="Rai1" /locus_tag="R008_G10136" mRNA complement(30629..31792) /gene="Rai1" /locus_tag="R008_G10136" /product="Rai1p" CDS complement(30629..31792) /gene="Rai1" /locus_tag="R008_G10136" /note="Similar to YGL246C 'Nuclear protein with decapping endonuclease activity targeted toward mRNAs with unmethylated 7-methylguanosine cap structures; binds to and stabilizes the exoribonuclease Rat1p; required for pre-rRNA processing; homologous to human DOM3Z'" /codon_start=1 /product="Rai1p" /protein_id="EWG86161.1" /translation="MGVSANLFVKQRGSTTALKQPKEIGFYSRTKDEEYLISDDTNLN YYYLPDAELDRKLDLSSGFQKFKDYYKDFEDRCSLRGLLETIESSERHKGKKINADII TFRGIARKLISCAFDSPSFNTVDLRIVSFNGQLFIKEVPEAVNAAKASSATEAGRNIN QDLNVFTGYKFETLATLSNPLQYTPREVIEKRTKRIVSHGDEYISVVRTGVGNCKLIL GAEVDCIFDFKENGRDNLKHYAELKCTQQVANISDTHKFERKLFRTWLQCFLVGIPRI IYGFKDDHYVLKTVEEFSTEEVPVLLKNNNPQVGSACLEAIKWYGLLTEWLLKMIPRD EDPHSQIRAFKLVFENNHLRLSEIEESDEEYSGLIDGEHILTNGFKEWRKSLK" gene 32035..34161 /gene="Gus1" /locus_tag="R008_G10141" mRNA 32035..34161 /gene="Gus1" /locus_tag="R008_G10141" /product="Gus1p" CDS 32035..34161 /gene="Gus1" /locus_tag="R008_G10141" /note="Similar to YGL245W 'Glutamyl-tRNA synthetase (GluRS), forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; complex formation increases the catalytic efficiency of both tRNA synthetases and ensures their correct localization to the cytoplasm'" /codon_start=1 /product="Gus1p" /protein_id="EWG86162.1" /translation="MPSTLTINGKAPIVAYAELIAARIVNALAPNSIAIKLVDDKKAP AAKLDDATEDVFNKITSKFAAIFDNGDKEQVAKWVNLAQKELVIKNFAKLSQSLETLD SQLNLRTFILGGLKYSAADVACWGALRSNGMCGSIIKNKVDVNVSRWYTLLEMDPIFG EAHDFLSKSLLELKKSANVGKKKETHKANFEIDLPDAKMGEVVTRFPPEPSGYLHIGH AKAALLNQYFAQAYKGKLIIRFDDTNPSKEKEEFQDSILEDLDLLGIKGDRITYSSDY FQEMYDYCVQMIKDGKAYCDDTPTEKMREERMDGVASARRDRSVEENLRIFTEEMKNG TEEGLKNCVRAKIDYKALNKTLRDPVIYRCNLTPHHRTGSTWKIYPTYDFCVPIVDAI EGVTHALRTIEYRDRNAQYDWMLQALRLRKVHIWDFARINFVRTLLSKRKLQWMVDKD LVGNWDDPRFPTVRGVRRRGMTVEGLRNFVLSQGPSRNVINLEWNLIWAFNKKVIDPI APRHTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAVGEKKVIYYKDIVVDKDDADV INVDEEVTLMDWGNVIITKKNDDGSMVAKLNLEGDFKKTKHKLTWLADTKDVVPVDLV DFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKIGDIIQFERKGYYRLDA LPKDGKPYVFFTIPDGKSVNKYGAKK" gene 34511..36196 /gene="Rtf1" /locus_tag="R008_G10146" /note="nonfunctional due to frameshift determined by sequencing error" gene 36385..37539 /gene="Tad1" /locus_tag="R008_G10151" mRNA 36385..37539 /gene="Tad1" /locus_tag="R008_G10151" /product="Tad1p" CDS 36385..37539 /gene="Tad1" /locus_tag="R008_G10151" /note="Similar to YGL243W tRNA-specific adenosine deaminase, deaminates adenosine-37 to inosine in tRNA-Ala" /codon_start=1 /product="Tad1p" /protein_id="EWG86163.1" /translation="MPSEDKLGEEISTRVVNEYSKLKSACRPIIRPSGIREWTILAGV AAINRDGGANKIEILSIATGVKALPDSELQRSEGKILHDCHAEILALRGANTVLLNRI QNYNPSSGDKFIQHNDEIPARFNLKENWELALYISRLPCGDASMTFLNDNCKNDDFIK IEDSDEFQYVDRSVKTILRGRLNFNRRNVVRTKPGRYDSNITLSKSCSDKLLMKQRSS VLNCLNYELFEKPVFLKYIVIPNLEDETKHYLEQSFHTRLPNLDNEIKFLNCLKPFYD DKLDEEDVPGLMCSVKLFMDDFSTEEAILNGVRNGFYTKSSNPLRKHCQSQVSRFAQW ELFKKIRPEYEGISYLEFKSRQKKRSQLIIAIKNILSPDGWIPTRTDDVK" gene complement(37684..38229) /locus_tag="R008_G10156" mRNA complement(37684..38229) /locus_tag="R008_G10156" /product="hypothetical protein" CDS complement(37684..38229) /locus_tag="R008_G10156" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86164.1" /translation="MNTEGASLSEQLLDAARRNNLDLLETVFDSLDNDPEKIAKLINE SKEPLGNTALHLCCKYGSWEVLDKILDQDGEIEIDPQNDVDGDTPLHVTVRYSQEEPE HGTFIARNLIEVGADPTVRNYNNQKPVDLVHGDELDELIDLLQGAELAIDSTNGSGDN NEDGEMIDDGPSDDDEEDDKK" gene 38476..41490 /gene="Kap114" /locus_tag="R008_G10161" mRNA 38476..41490 /gene="Kap114" /locus_tag="R008_G10161" /product="Kap114p" CDS 38476..41490 /gene="Kap114" /locus_tag="R008_G10161" /note="Similar to YGL241W 'Karyopherin, responsible for nuclear import of Spt15p, Sua7p, histones H2A and H2B, and Nap1p; amino terminus shows similarity to those of other importins, particularly Cse1p; localization is primarily nuclear'" /codon_start=1 /product="Kap114p" /protein_id="EWG86165.1" /translation="MDINELIIGAQSADKHTREVAETQLLQWCDSDASQVFKALANVA LQHEAFLESRQFALLSLRKLITMYWSPGFESYRSTSNVEVDVKDFIREVLLKLCLNDN ENTKIKNGASYCIVQISAVDFPDQWPQLLTVIYDAISHQHSLNAMSLLNEIYDDVVSE EMFFEGGIGLATMEIVFKVLNTETSTLIAKIAALKLLKACLLQMSSHNEYDEASRKNF VSQCLATSLQILGQLLTLNFGNVDVISQLKFKSIIYENLVFIKNDFSRKHFSSELQKQ FKIMAIQDLENVTHINANVETTESEPLLETVHDCSIYIVEFLTSVCTLQFSVEEMNKI ITSLTILCQLSSETREIWTSDFNTFVSKETGLAASYNVRDQANEFFTSLPNPQLSLIF KVVSSDIEHSTCNYSTLESLLYLLQCILLNDDEITGENIDQSLQILIKTLENILVSQE IPELILARAILTIPRVLDKFIDALPDIKPLTSAFLAKSLNLALKSDKELIKSATLIAF TYYCYFAELDSVLGPEVCSKTQEKVIRIINQVSSDAEEDTNGALMEVLSQVISYNPKE PHSRKEILQAEFHLVFTISSEDPANVQVVVQSQECLEKLLDNINMDNYKNYIELCLPS FINVLDSNNANNYRYSPLLSLVLEFITVFLKKKPNDGFLPDEINQYLFEPLAKVLAFS TEDETLQLATEAFSYLIFNTDTRAIEPRLMDIMKVLERLLSLEVSDSAAMNVGPLVVA IFTRFSKEIQPLIGRILEAVVVRLIKTQNISTEQNLLSVLCFLTCNDPKQTVDFLSSF QIDNTDALTLVMRKWIEAFEVIRGEKRIKENIVALSNLFFLNDERLQKVVVNGDLIPY EGDLIITRSMAKKMPDRYVQVPLYTKIIKLFVSELSFQSKQPNPEQLITSDIKQEVVN ANKDDDNDDWEDVDDVLDYDKLKEYIDDDVDEEADDDSDDITGLMDVKESVVQLLVRF FKEVASKDVSGFHCIYETLSDSERKVLSEALL" gene 41644..42396 /gene="Doc1" /locus_tag="R008_G10166" mRNA 41644..42396 /gene="Doc1" /locus_tag="R008_G10166" /product="Doc1p" CDS 41644..42396 /gene="Doc1" /locus_tag="R008_G10166" /note="Similar to YGL240W 'Processivity factor required for the ubiquitination activity of the anaphase promoting complex (APC), mediates the activity of the APC by contributing to substrate recognition; involved in cyclin proteolysis'" /codon_start=1 /product="Doc1p" /protein_id="EWG86166.1" /translation="MDPIGINKVLDHLAPSELIKPVKSCHNKPSVLVLDDRIVDAATK DLYVNGFQEEIQYQNPTPENLQHMFHQGIEIMDSARMINVTHLALWKPSSFKLGNPVD FALDDNYDTFWQSDGGQPHQLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHS PSDARFYKMLEVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIR LYVPSNEPHQDTHEWAQTLPETNNVFQDAILR" gene 42582..45465 /gene="Cse1" /locus_tag="R008_G10176" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(45758..46558) /gene="Hap2" /locus_tag="R008_G10181" mRNA complement(45758..46558) /gene="Hap2" /locus_tag="R008_G10181" /product="Hap2p" CDS complement(45758..46558) /gene="Hap2" /locus_tag="R008_G10181" /note="Similar to YGL237C 'Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding'" /codon_start=1 /product="Hap2p" /protein_id="EWG86167.1" /translation="MSADETDAKFHPLETDLQSDTAAATSTAAASRSPSLRAKPIEMP LDMGKAPSPRGEDQRVTNEEDLFLFNRLRASQNRVMDSLEPQQQSQYTSSSVSTMEPS ADFASFSAVTTLPPPPHQQQQQQRQQQQQQQQLVVQAQYTQNQPNLQSDVLGTAIAEQ PFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFLTA AEIKAMKSKKSGASDDPDDSHEDKKITTKIIQEQPHATSTAAAADNKT" gene complement(46819..48828) /gene="Mto1" /locus_tag="R008_G10186" mRNA complement(46819..48828) /gene="Mto1" /locus_tag="R008_G10186" /product="Mto1p" CDS complement(46819..48828) /gene="Mto1" /locus_tag="R008_G10186" /note="Similar to YGL236C 'Mitochondrial protein, forms a heterodimer complex with Mss1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants'" /codon_start=1 /product="Mto1p" /protein_id="EWG86168.1" /translation="MLRVTTLASSCTSFPLQVLRRRLTISSLTSFQPTTKTQVVVIGA GHAGCEAAAASSRTGAHTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDGLMGK VTDLAGVQFKMLNRSKGPAVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKVAD LILYDPGCGHKVIKGVVLDDGTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPT YGISNTLQNEVGFQLGRLKTGTPARLAKESIDFSALEVQKGDKLPVPMSFLNETVSVE PTKQLDCFGTHTTPQMHDFLRNNLHQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHK IWLEPEGFNSDVIYPNGISNSMPEDVQLQMMRLIPGMANVEILQPAYGVEYDYVDPRQ LKPSLETKLVDGLFLAGQINGTTGYEEAAAQGIIAGINAGLLSRQEREQLVLKRSQAY IGVLIDDLINNGVIEPYRMFTSRSEFRISVRADNADFRLTPIGAQLGIISPVRLSQYS RDKHLYDETIRALQNFKLSSQKWSSLLQANIAPQAENRSAWEIFRFKDMDLHKLYECI PDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTL STECKLLLNRVQPLTIGQARRIQGITAAALFELYRVARKPSQPVM" gene 48311..48847 /locus_tag="R008_G10191" mRNA 48311..48847 /locus_tag="R008_G10191" /product="hypothetical protein" CDS 48311..48847 /locus_tag="R008_G10191" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86169.1" /translation="MTLWPHPGSYKIKSATLFCSRDKLGCAFLSESSLCMYFLYNSLS IWALGPHTAGPLLLLSILNCTPARSVTLPISPSRASISFTRMPLPTPPIEGLHEHLPI SVNDGVMRVVCAPVLDDAAAASQPACPAPMTTTCVLVVGWKLVKEDMVNRLLRTCKGN EVHEDAKVVTRSIVLWGV" gene 49513..51921 /gene="Ade5,7" /locus_tag="R008_G10196" mRNA 49513..51921 /gene="Ade5,7" /locus_tag="R008_G10196" /product="Ade5,7p" CDS 49513..51921 /gene="Ade5,7" /locus_tag="R008_G10196" /note="Similar to YGL234W Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway, contains aminoimidazole ribotide synthetase and glycinamide ribotide synthetase activities" /codon_start=1 /product="Ade5,7p" /protein_id="EWG86170.1" /translation="MLNILVLGNGAREHVLVTKLAQSPTVGKIYVAPGNGGTATMDPS RVINWDITPDVANFARLQSMAVEHKINLVVPGPELPLVNGITSVFHSVGIPVFGPSVK AAQLEASKAFSKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGKG VIIPSSIDESVQAIKDIMVTKQFGEEAGKQVVIEQFLEGDEISLLTIVDGYSHFNLPV AQDHKRIFDGDKGLNTGGMGAYAPAPVATPSLLKTIDSQIVKPTIDGMRRDGMPFVGV LFTGMILVKDSKTNQLVPEVLEYNVRFGDPETQAVLSLLDDQTDLAQVFLAAAEHRLD SVNIGIDDTRSAVTVVVAAGGYPESYAKGDKITLDTDKLPPHTQIFQAGTKYDSATDS LLTNGGRVLSVTSTAQDLRTAVDTVYEAVKCVHFQNSYYRKDIAYRAFQNSESSKVAI TYADSGVSVDNGNNLVQTIKEMVRSTRRPGADSDIGGFGGLFDLAQAGFRQNEDTLLV GATDGVGTKLIIAQETGIHNTVGIDLVAMNVNDLVVQGAEPLFFLDYFATGALDIQVA SDFVSGVANGCIQSGCALVGGETSEMPGMYPPGHYDTNGTAVGAVLRQDILPKINEMA AGDVLLGLASSGVHSNGFSLVRKIIQHVALPWDAPCPWDESKTLGEGILEPTKIYVKQ LLPSIRQRLLLGLAHITGGGLVENIPRAIPDHLQARVDMSTWEVPRVFKWFGQAGNVP HDDILRTFNMGVGMVLIVKRENVKAVCDSLTEEGEIIWELGSLQERPKDAPGCVIENG TKLY" gene 52153..54885 /gene="Sec15" /locus_tag="R008_G10206" mRNA 52153..54885 /gene="Sec15" /locus_tag="R008_G10206" /product="Sec15p" CDS 52153..54885 /gene="Sec15" /locus_tag="R008_G10206" /note="Similar to YGL233W 'Essential 113kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p), which mediates polarized targeting of vesicles to active sites of exocytosis; Sec15p associates with Sec4p and vesicles'" /codon_start=1 /product="Sec15p" /protein_id="EWG86171.1" /translation="MDQEGQPLLSKDFQQVLLATASGNNSSWTERAVLNNESTDAVKH EPALGQNDVFDLDPLSFDKWVPFLRRALDKNQLDPVIDELENSIEDNFQGLELQLLQD SQMNDKLETSIDEIANIQGMVQDTLSSEISKFQIRLSESANELIVKKQMYVNNKKISL KISEATILITKVVRILELSSKCQELITERKFFKVLQNLDSLEKLYLQEFKNYNFQFLI EIYNSIPFLQKVTKDECINLIRNSLNLNLGKNLIKVGQEFVAIYENELLPQWLETRSK MKLTNFKFNSPIEISMRDESFLAKLNLGEFFQLDDFHDSIMIFQNLNELSVLSGEFNK EYELRKTKLMYPLIWKKNKTAAYQMDSLLRGTGTTPGSTAHDVSTDDPFTQSLSLHFL QDYFLKILGFLLYDINLNKATEFILVDNNYNSTNEFWDGLMDRLSPYLSYFIDEKLKT EEDMIKLKDFLCIYVAILENFKLNIEPLYKILVSIFEKFCSVSLRAFDDEFQILLNDD DFMPLSINDKTLYEKVLKICWMKEGEHLSLPDPTNGEPFAVTLPFSPLYPMTCTLAKK TYSKITAFLSIFYRHELHTLNNILVKTMDDIFNDIVNKKIRSKLESTSREEIAQILVN LDYFIIAAKEFSNFMTRENILQNPDMEIRLSSIKYLAESRKLAETKLIELIDSKISDI LETIEIDWQITEVRQDPDISIIDLAQFLEMMFASTLQNLPYSVQTLLIFREFDSLTRQ FMDLLLHDTPSTITHESIMNFEVDVNYLESIIPRIFPSTPGTIDSNGYQSPMTPSTPT FPNANGVDAPTLFENNIKSLEATFMELKQCIELLKTQGKDYNEPEIRLRKYSRIRQED AALLLSKIQHFVSSVEGANGDDTSVMDSSSIFNSESASVIDSNTSRIAKFFNRR" gene 55105..56032 /gene="Tan1" /locus_tag="R008_G10211" mRNA join(55105..55161,55220..56032) /gene="Tan1" /locus_tag="R008_G10211" /product="Tan1p" CDS join(55105..55161,55220..56032) /gene="Tan1" /locus_tag="R008_G10211" /note="Similar to YGL232W Putative tRNA acetyltransferase, RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA" /codon_start=1 /product="Tan1p" /protein_id="EWG86172.1" /translation="MGEKRNRNGKDANSQNRKKFKVSSGFLDPGTSGIYATCSRRHER QAAQELQLLFEEKFQELYGDIKEGEDESENDEKKDLSIEDQIKKELQELKGEETGKDL SSGETKKKDPLAFIDLNCECVTFCKTRKPIVPEEFVLSIMKDLADPKNMVKRTRYVQK LTPITYSCNAKMEQLIKLANLVIGPHFHDPSNVKKNYKFAVEVTRRNFNTIERMDIIN QVVKLVNKEGSEFNHTVDLKNYDKLILVECFKSNIGMCVVDGDYKTKYRKYNVQQLYE SKFRKDEDKSVKQ" gene complement(56078..56650) /locus_tag="R008_G10216" mRNA complement(56078..56650) /locus_tag="R008_G10216" /product="hypothetical protein" CDS complement(56078..56650) /locus_tag="R008_G10216" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86173.1" /translation="MSEQEPYEWAKHLLDTKYIEKYNIQNSNTLPSPPGFEGNSSKGN VTRKQQDATSQTTSLAQKNQITVLQVQKAWQIALQPAKSIPMNIFMSYMSGTSLQIIP IMTALMLLSGPIKAIFSTRSAFKPVLGNKATQSQVQTAMFMYIVFQGVLMYIGYRKLN SMGLIPNAKGDWLPWERIAHYNNGLQWFSD" gene complement(56802..57245) /locus_tag="R008_G10226" mRNA complement(56802..57245) /locus_tag="R008_G10226" /product="hypothetical protein" CDS complement(56802..57245) /locus_tag="R008_G10226" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86174.1" /translation="MGIITLSGNVLHLLKAYPKKGLEEVSQPEPNTANDSSTEYKGKS KDDFQMVEKSNTDERYNFTRTKKWFLLMTSEYYKLMENRLLMFCIIACSFICAIQFLF FIIYWTNIVPRKTQRAITNLNYDYLTAHLKEQCVPYAKILDQCIL" gene complement(57533..59988) /gene="Sap4" /locus_tag="R008_G10231" /note="nonfunctional due to frameshift determined by sequencing error" gene 60627..62360 /gene="She10" /locus_tag="R008_G10236" mRNA 60627..62360 /gene="She10" /locus_tag="R008_G10236" /product="She10p" CDS 60627..62360 /gene="She10" /locus_tag="R008_G10236" /note="Similar to YGL228W 'Putative glycosylphosphatidylinositol (GPI)-anchored protein of unknown function; overexpression causes growth arrest'" /codon_start=1 /product="She10p" /protein_id="EWG86175.1" /translation="MGKLIKLITTLTVLVSLLQYCCEFNSGSISCERTQTLCHYTNPR VWNTYFSRNCELYKNKVSPGFDIVARKYDTAVKPVIDDATVKVNKVAIQPAFKVIHSQ CKKWNCGKYYQLVRSPMVKTRRFFFAKYNAFVKPNIDKFFTAEFRSHLKERILKCKNI GHYYFTITSRCIKSKYDFIVGNTEEKLMGKFKNKDTHGIHGSVTHEPSSEDMVLTVST MESDEEELTTTSTQTVVETITLDQEEASAVANHAHDDEASTDVEDSTDVNVNEQALLQ EDFDMWSETILQKTQDVIQLFEKDVSKYINGKLVEEANHFKAKFQSLDDKSKKFFSKI SLAINDIECVEGIDSETGKKIFFDKSGSTEISQYITRELVREYFNETRSTLDELTNAM EKDLSEITDEIEKKVNAIREENVEVFEEWGDIIVNEWSKRMAYVDVINAHMGADDDTT LDEEKAKSSVNWKKFLKGKKQIIESRDKLAHHSADLSRVNAFRQKVQKKILSFTQESG EFLYILRSKANLQFQERERKERERKEREKAAAEEFQRQQELLRQQEEEDEEDVSYTST STITTTTTMTL" gene 62704..65580 /gene="Vid30" /locus_tag="R008_G10246" mRNA 62704..65580 /gene="Vid30" /locus_tag="R008_G10246" /product="Vid30p" CDS 62704..65580 /gene="Vid30" /locus_tag="R008_G10246" /note="Similar to YGL227W 'Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase (FBPase); binds FBPase; shifts the balance of nitrogen metabolism toward glutamate production; localizes to the nucleus and the cytoplasm'" /codon_start=1 /product="Vid30p" /protein_id="EWG86176.1" /translation="MSEYMDDVDREFINCLFPSYLLQQPVAYDLWILYLQHRKLFHKL KNTNLINADENPTGVGMGRTKLTALTRKEIWSKLMNLGVLGTISFEAVNDDYLIQVYK YFYPDVNDFTLRFGVKDSNKNSVRVMKASSDMRKNAQELLEPVLSEREMALNSNTSLE NDRNDDDDDDDDDDDDDDDDDDDDDESDLESLEGEVDTDTDDNNEGDGSDNHEEGGEE GSRGADADVSSAQQRAERVADPWIYQRSRSAINIETESRNLWDTSDKNSGLQYYPPDQ SPSSSFSSPRVSSGNDKNDNEATNVLSNSGSKKKNSMIPDIYKILGYFLPSRWQAQPN NSLQLSQDGITHLQPNPDYHSYMTYERSSASSASTRNRLRTSFENSGKVDFAVTWANK SLPDNKLTIFYYEIKVLSVTSTESAENSNIVIGYKLVENELMEATTKKSVSRSSVAGS SSSLGGSNNMSSNRVPSTSFTMEGTQRRDYIYEGGVSAMSLNVDGSINKCQKYGFDLN VFGYCGFDGLITNSTEQSKEYAKPFGRDDVIGCGINFIDGSIFFTKNGIHLGNAFTDL NDLEFVPYVALRPGNSIKTNFGLNEDFVFDIIGYQDKWKSLAYEHICRGRQMDVSIEE FDSDESEEDETENGPEENKSTNVNEDLMDIDQEDGAAGNKDTKKLNDEKDNNLKFLLG EDNRFIDGKLVRPDVNNINNLSVDDGSLPNTLNVMINDYLIHEGLVDVAKGFLKDLQK DAVNVNGQHSESKDVIRHNERQIMKEERMVKIRQELRYLINKGQISKCINYIDNEIPD LLKNNLELVFELKLANYLVMIKKSSSKDDDEIENLILKGQELSNEFIYDTKIPQSLRD RFSGQLSNVSALLAYSNPLVEAPKEISGYLSDEYLQERLFQVSNNTILTFLHKDSECA LENVISNTRAMLSTLLEYNAFGSTNSSDPRYYKAINFDEDVLNL" gene complement(65782..66191) /gene="Ost5" /locus_tag="R008_G10251" /note="nonfunctional due to frameshift determined by sequencing error" gene 66371..66742 /locus_tag="R008_G10256" mRNA 66371..66742 /locus_tag="R008_G10256" /product="hypothetical protein" CDS 66371..66742 /locus_tag="R008_G10256" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86177.1" /translation="MMGRNGILLALKRSFSTYQPPVVEITNITKLWPTLRPEVRDEIK EYLRWRMEEDWRHIPLEETKAAYFLSYGPCGGRSKGNEWNVGYTGMRMVFNLVLFGGA ATAFYNWKQDKKLEEQLRDLV" gene complement(66859..66932) /locus_tag="R008_G10261" tRNA complement(66859..66932) /locus_tag="R008_G10261" /product="tRNA-Val" /note="TV(AAC)G3" assembly_gap 66953..72138 /estimated_length=5186 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 75349..76362 /gene="Vrg4" /locus_tag="R008_G10271" mRNA 75349..76362 /gene="Vrg4" /locus_tag="R008_G10271" /product="Vrg4p" CDS 75349..76362 /gene="Vrg4" /locus_tag="R008_G10271" /note="Similar to YGL225W 'Golgi GDP-mannose transporter; regulates Golgi function and glycosylation in Golgi'" /codon_start=1 /product="Vrg4p" /protein_id="EWG86178.1" /translation="MSELKTGHAGHNPWASVANSGPISILSYCGSSILMTVTNKFVVN LKDFNMNFVMLFVQSLVCTITLIILRILGYAKFRSLNKTDAKNWFPISFLLVLMIYTS SKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDQ QAVAAKAASLAEGAAGAVASFNPGYFWMFTNCITSALFVLIMRKRIKLTNFKDFDTMF YNNVLALPILLLFSFCVEDWSSVNLTNNFSNDSLTAMIISGVASVGISYCSGWCVRVT SSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQKKQQAQP LRK" gene complement(76468..77310) /gene="Sdt1" /locus_tag="R008_G10276" mRNA complement(76468..77310) /gene="Sdt1" /locus_tag="R008_G10276" /product="Sdt1p" CDS complement(76468..77310) /gene="Sdt1" /locus_tag="R008_G10276" /note="Similar to YGL224C 'Pyrimidine nucleotidase; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives'" /codon_start=1 /product="Sdt1p" /protein_id="EWG86179.1" /translation="MTVEYTASDLATYQNEVNEQIAKNKAHLESLTHPGSKVTFPIDQ DISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNS YYKEYGLAIRGLVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDK LWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVV PDLF" gene complement(77546..78799) /gene="Cog1" /locus_tag="R008_G10281" mRNA complement(77546..78799) /gene="Cog1" /locus_tag="R008_G10281" /product="Cog1p" CDS complement(77546..78799) /gene="Cog1" /locus_tag="R008_G10281" /note="Similar to YGL223C Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments" /codon_start=1 /product="Cog1p" /protein_id="EWG86180.1" /translation="MDEVLPLFRDSHIPQIKDYQLELQNDLTKTNEAFQKNLLKNYNK ILSLTDSVNDLSLNLKNVDQDFKSLCFNDEKFQLNKLAPLPYQTTTHISPPRDEEKVS IPSQNILVISNWTISINNFCNRIVTSTTPSRIFDELLLNFHELSLIPVPSKFEALVKD KCCRLQKFLVDSMKTLNLTLLQWVKLYNLLNTEFSSKWDDDLLSIFNESLFETLFNDN VQALLISSANSKDHQYYSNQQYKDAIVVDFVNSSTFRDHLIRRTVKEINTHLDTLSTL RAKLKEPETLHQLDIFHDNDTNLNDGTVSPLDDDALKQYIDAAVFYSKGLTNDTTLQI YQTVQPTIEILQNLELYKCPQETLTDLRNKLITQLQEFKTQISSRLPSPLENSTSVVD DFITSYNNHNLLQLVIDQITQLRQQ" gene complement(79087..79623) /gene="Edc1" /locus_tag="R008_G10291" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(79863..80729) /gene="Nif3" /locus_tag="R008_G10296" mRNA complement(79863..80729) /gene="Nif3" /locus_tag="R008_G10296" /product="Nif3p" CDS complement(79863..80729) /gene="Nif3" /locus_tag="R008_G10296" /note="Similar to YGL221C 'Protein of unknown function, similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies'" /codon_start=1 /product="Nif3p" /protein_id="EWG86181.1" /translation="MSRAITRAQLDKLVRSITKFYPQKYADKSWDNTGLLIDCSTAQV TTADANAKTKVLLTVDLTKSVAQEAVDANCNVIVAYHPFIFPSWNRLSPHTNPQHETA IKLIQYGISVYCPHTAVDAARGGVNDWLVRGLNNGENVAKSYALETVSGETDDLIGYG RFVEFNKDISLEQIVKNVKRVLRVPYVQVASLAAPSAWNQLKIKKVAVCAGSGSGVFK QLKEDVDLYYTGEMSHHEVLKWKEMGKTVIVCNHSNTERGFLQDVMKGLLQDEGHEVV VSKMDCDPLTVA" gene 80811..81173 /gene="Aim15" /locus_tag="R008_G10301" mRNA 80811..81173 /gene="Aim15" /locus_tag="R008_G10301" /product="Aim15p" CDS 80811..81173 /gene="Aim15" /locus_tag="R008_G10301" /note="Similar to YGL220W 'Protein involved in negative regulation of transcription of iron regulon; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; null mutant fails to repress iron regulon and is sensitive to nickel'" /codon_start=1 /product="Aim15p" /protein_id="EWG86182.1" /translation="MTGERIEKVKINDEFAKSHFLTTQWRETKRQRHYKMPVTEQGLR ERIESAIPQVYHIIVTDLSYGCGQSFDIVVVSDFFQGKSKLMRSRAVNKAVKEELQEI HAFSCKCYTEEEWSKIVV" gene complement(81315..82694) /gene="Mdm34" /locus_tag="R008_G10306" mRNA complement(81315..82694) /gene="Mdm34" /locus_tag="R008_G10306" /product="Mdm34p" CDS complement(81315..82694) /gene="Mdm34" /locus_tag="R008_G10306" /note="Similar to YGL219C Mitochondrial component of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth" /codon_start=1 /product="Mdm34p" /protein_id="EWG86183.1" /translation="MSFRFNEAVFGDNSFNERVREKLSTALNSPSKKKLDILKSGIKV QKVDFPTIPQLEILDLDIITQPKSLAKGICKISCKDAMLRIQTVIESNLLLINEQDTP SFTMPQLINNGSFTIPITMTFSSIELEAITNIFVKNPGIGISFNDVDLDFKFDCSVKI LQSTIERRLKESMHVVFKDVLPSLIFNTSQNWFTNRGESTSTIPGKREHHHQQTTMSR NVILDGSDFQELSPINMLRLSSIVSSRSTLSLHSTVMNSLSAIPGCLERQNLYRFISR MPSLNNYYSSQSFPQPKSSTVSSKQLVKPFYCSHNLLPKTVLDSSQYDLATITKIQSR LFDRSNSNDDNAKPRRRKIKCKKTRTPSNLQSQGEQAVDDSTAIETVTSTPVQTPIPE LEEQSPPYLKTTVSIRDKYVIPEKISLNLDSKKDTSKKKPFYFIGLNSQEPSNNWKWG MEDSPPPYH" gene 83324..85742 /gene="Kip3" /locus_tag="R008_G10321" /note="nonfunctional due to frameshift determined by sequencing error" gene 86419..87777 /gene="Clg1" /locus_tag="R008_G10326" mRNA 86419..87777 /gene="Clg1" /locus_tag="R008_G10326" /product="Clg1p" CDS 86419..87777 /gene="Clg1" /locus_tag="R008_G10326" /note="Similar to YGL215W 'Cyclin-like protein that interacts with Pho85p; has sequence similarity to G1 cyclins PCL1 and PCL2'" /codon_start=1 /product="Clg1p" /protein_id="EWG86184.1" /translation="MANTFKYYPETMGNSSGYPISLPFPKGSATSAVNVARQLPKYLG HVPSQSVHTQLPSMASLGYFNQPSSTYYAPPAPLQQHQQPPILPPPGLMYTSNNNSNV IPPPVQMIRDGQQQPQQSNQVNGGVSENLDYDISIMSKFIMENAFVAFNANYSTDDQT TDLFFKGISSVLNATRLPSATIFLAIDYLFKYINKLSNGIHSIGGNSINIIYQNTMIA FILANKFNDDKTFTNSSWSQATGILINVINDFERQWLRIFNWELYDSAFLYFEFVKNF EIFRQNQLKPAVAVPTLLSPIVNVGDTRNVNFNLKPTSTNNLLSPVSNYETPMLMPHN MFSSPSYQSNSRSEFSSMNGYYNYYNYNQPRLNYYQQFPNIYSSPISETQFDYDFYNF SSQQQQQQQKQHSLLPAAPQLPPPHVHNQSYGHHLGWKSMDDTINHSRFERSYFPYSA VY" assembly_gap 87868..88097 /estimated_length=230 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(88359..89552) /gene="Ski8" /locus_tag="R008_G10336" mRNA complement(88359..89552) /gene="Ski8" /locus_tag="R008_G10336" /product="Ski8p" CDS complement(88359..89552) /gene="Ski8" /locus_tag="R008_G10336" /note="Similar to YGL213C 'Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype'" /codon_start=1 /product="Ski8p" /protein_id="EWG86185.1" /translation="MSKVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNK LLDNENPKDKSYSHFVHKSGLHHVDVLQTIERDAFELCLVATTSFSGDLLFYRITRED ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR EAGGK" gene 89737..90687 /gene="Vam7" /locus_tag="R008_G10341" mRNA 89737..90687 /gene="Vam7" /locus_tag="R008_G10341" /product="Vam7p" CDS 89737..90687 /gene="Vam7" /locus_tag="R008_G10341" /note="Similar to YGL212W 'Vacuolar SNARE protein that functions with Vam3p in vacuolar protein trafficking; has an N-terminal PX domain (phosphoinositide-binding module) that binds PtdIns-3-P and mediates membrane binding; SNAP-25 homolog'" /codon_start=1 /product="Vam7p" /protein_id="EWG86186.1" /translation="MAANSVGKMSEKLRIKVDDVKINPKYVLYGVSTPNKRLYKRYSE FWKLKTRLERDVGSTIPYDFPEKPGVLDRMWQRRYDDPEMIDERRIGLERFLNELYND RFDSRWRDTKIAQDFLQLSKPNVSQEKSQQHLETADEVGWDEMIRDIKLDLDKESDGT PSVRGALRARTKLHKSRERLEQDVQKKSLPSTEVTRRAALLRSLLKECDDIGTANIAQ DRGRLLGVATSDNSSTMEVQGRTNNDLQQGQMQMVRDQEQELVALHRIIQAQRGLALE MNEELQTQNELLTALEDDVDNTGRRLQIANKKARHFNNSA" gene 90818..91897 /gene="Ncs6" /locus_tag="R008_G10346" mRNA 90818..91897 /gene="Ncs6" /locus_tag="R008_G10346" /product="Ncs6p" CDS 90818..91897 /gene="Ncs6" /locus_tag="R008_G10346" /note="Similar to YGL211W 'Protein required for thiolation of the uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae'" /codon_start=1 /product="Ncs6p" /protein_id="EWG86187.1" /translation="MSFTAPSDPVNKPTKVKVSQLCELCHSRKALIRRPKNLSKLCKQ CFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVL LSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYC GVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARLEKSTAIITQSSGS PIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYMKNLEAVRPSCI IDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACMLLEGLEKSRA QVAIENDTSADGAALKLRALEKLSF" gene 92098..92766 /gene="Ypt32" /locus_tag="R008_G10351" mRNA 92098..92766 /gene="Ypt32" /locus_tag="R008_G10351" /product="Ypt32p" CDS 92098..92766 /gene="Ypt32" /locus_tag="R008_G10351" /note="Similar to YGL210W 'Rab family GTPase, very similar to Ypt31p; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi'" /codon_start=1 /product="Ypt32p" /protein_id="EWG86188.1" /translation="MSNEDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKS TIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYE NCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNS DNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKS SNCC" gene 94166..95314 /gene="Mig2" /locus_tag="R008_G10366" mRNA 94166..95314 /gene="Mig2" /locus_tag="R008_G10366" /product="Mig2p" CDS 94166..95314 /gene="Mig2" /locus_tag="R008_G10366" /note="Similar to YGL209W 'Protein containing zinc fingers, involved in repression, along with Mig1p, of SUC2 (invertase) expression by high levels of glucose; binds to Mig1p-binding sites in SUC2 promoter'" /codon_start=1 /product="Mig2p" /protein_id="EWG86189.1" /translation="MPKKQTNFPVDNENRPFRCDTCHRGFHRLEHKKRHLRTHTGEKP HHCAFPGCGKSFSRSDELKRHMRTHTGQSQRRLKKASVQKQEFLTVSGIPTIASGVMI HQPIPQVLPANMAINVQAVNGGNIIHAPNAVHPMVIPIMAQPAPIHASAASFQPATSP MPISTYTPVPSQSFTSFQSSIGSIQSNSDVSSIFSNMNVRVNTPRSVPNSPNDGYLHQ QHIPQQYQHQTASPSVAKQQKTFAHSLASALSTLQKRTPVSAPSTTIESPSSPSDSSH TSASSSAISLPFSNAPSQLAVAKELESVYLDSNRYTTKTRRERAKFEIPEEQEEDTNN SSSSSNEEEHESLDHESSKSRKKLSGVKLPPVRNLLKQIDVFNGPKRV" gene 95646..96893 /gene="Sip2" /locus_tag="R008_G10371" mRNA 95646..96893 /gene="Sip2" /locus_tag="R008_G10371" /product="Sip2p" CDS 95646..96893 /gene="Sip2" /locus_tag="R008_G10371" /note="Similar to YGL208W 'One of three beta subunits of the Snf1 serine/threonine protein kinase complex involved in the response to glucose starvation; null mutants exhibit accelerated aging; N-myristoylprotein localized to the cytoplasm and the plasma membrane'" /codon_start=1 /product="Sip2p" /protein_id="EWG86190.1" /translation="MGTTTSHPAQKKQTTKKCRAPIMSDVREKPSNAQGCEPQEMDAV SKKVTELSLNKCSDSQDAGQPSREGSITKKKSTLLLRDEDEPTMPKLSVMETAVDTDS GSSSTSDDEEGDIIAQTTEPKQDASPDDDRSGHSSPREEGQQQIRAKEASGGPSEIKS SLMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFI VDNELRVSDFLPTATDQMGNFVNYIEVRQPEKKPTNEKIRSKEAYSMRPPTSDRSSIA LQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMERYYYTLDRQQNNTD TSWLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLC VASIVRYKQKYVTQILYTPIESS" gene 97280..100387 /gene="Spt16" /locus_tag="R008_G10381" mRNA 97280..100387 /gene="Spt16" /locus_tag="R008_G10381" /product="Spt16p" CDS 97280..100387 /gene="Spt16" /locus_tag="R008_G10381" /note="Similar to YGL207W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), which associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases" /codon_start=1 /product="Spt16p" /protein_id="EWG86191.1" /translation="MEELNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENP YQKTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKAIDLFKDPESKITLEL WQRNNKEPEHNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEF NVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLS DKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARST NDQLYGNGCILASCGIRYNNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKP GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNAKNDYRKIQRGD CFNISFGFNNLKDSQSANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNE EEDNNKKKSSPATKVPSKPDRNSKILRTKLRGEARGGAEDAQKEQIRKENQKKLHEKL EKNGLLRFSAADANGPDSEPRQYFKKYESYVRDSQLPTNIRDLRIHVDWKSQTIILPI YGRPVPFHINSYKNGSKNEEGEYTYLRLNFNSPGSSGGISKKVEELPYEESADNQFVR SITLRSKDGDRMSETFKQIADLKKEATKREQERKALADVVQQDKLIENKTGRTKRLDQ IFVRPNPDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNLIFQSCKGELIVVI HIHLKNPILMGKKKIQDVQFYREASDMSVDETGGGRRGQSRFRRYGDEDELEQEQEER RKRAALDKEFKYFADAIAEASNGLLTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLI EPPFLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWL TDMDIPYTVSTINLNWATIMKSLQDDPYQFFLDGGWNFLATGSDDEASDESEEEVSEY EASEDDVSDESAFSEDEEGSEVDDDISGDESEDYTGDESEEGEDWDELEKKAARADRG ANFRD" gene complement(100850..105811) /gene="Chc1" /locus_tag="R008_G10386" mRNA complement(100850..105811) /gene="Chc1" /locus_tag="R008_G10386" /product="Chc1p" CDS complement(100850..105811) /gene="Chc1" /locus_tag="R008_G10386" /note="Similar to YGL206C 'Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; two heavy chains form the clathrin triskelion structural component; the light chain (CLC1) is thought to regulate function'" /codon_start=1 /product="Chc1p" /protein_id="EWG86192.1" /translation="MSDLPIEFTELVDLTSLGISPQFLDFRSTTFESDHFVTVRETKD GTNSVAIVDLAKGNEVTRKNMGGDSAIMHPSQMVISVRANGTIVQIFNLETKSKLKSF TLDEPVIFWRWLSETTLGFVTARSILTSNVFDGNVNAKPQLLTLRHANLNNTQIINFV ANKNLDWFAVVGILQENGRIAGRIQLFSKQRNISQAIDGHVAIFTNILLEGNGSTPVQ VFVTGNRNATTGAGELRIIEIDHDASLPSQYQKKTTDIFFPPDATNDFPIAVQVSEKY GIIYLLTKYGFIHLYELETGTNLFVNRITAESVFTAAPYNHENGIACINKKGQVLAVE ISTSQIVPYILNKLSNVALALTVATRGGLPGADDLFQKQFESLLLQNDYQNAAKVAAS STSLRNQNTINRLKNIQAPPGAISPILLYFSTLLDKGKLNKEETIELARPVLQQDRKQ LFEKWLKEDKLECSEELGDIVKPFDTTLALACYLRAGAHAKVISCLAELQQFEKIIPY CQKVGYQPNFLVLISSLIRSSPDRASEFAVSLLQNPETASQIDIEKIADLFFSQNHIQ QGTSLLLDALKGDTPDQGHLQTRVLEVNLLHAPQVADAILGNNIFSHYDKPTIASLSE KAGLYQRALENYTDIKDIKRCVVHTNALPIDWLVGYFGKLNVEQSLACLKALMDNNIQ ANIQTVVQVATKFSDLIGPSTLIKLFEDYNATEGLYYYLASLVNLTEDKDVVYKYIEA AAKMKQYREIERIVKDNNVYDPERVKNFLKDANLEDQLPLVIVCDRFDFVHEMILYLY KSQNLKFIETYVQQVNPSKTAQVVGALLDMDCDEAFIQSLLQSVLGQVPIDELTTEVE KRNRLKILLPFLEQSLSQGIQDQAVYNALAKIYIDSNNSPEKFLKENDQYDTLDVGHY CEKRDPYLAYIAYEKGQNDDDLIRITNENSMYKYQARYLLERSDLDLWNKVLNQENIH RRQLIDSVISVGIPELTDPEPVSLTVQAFMTNGLKLELIELLEKIILEPSPFNENVAL QGLLLLSAIKYEPTKVSSYIEKLDNYDADEIAPLCIEHDLKEEAFEIYDKHEMYGKAL KVLIEDIMSLDRAASYADKINTPELWSQIGTAQLDGLRIPDAIESYIKAEDPSNYENV IDIAEQAGKYEELIPFLLMARKTLKEPKIDGALILAYAGLNKIHEIENLLAGSNVANL DHVGDKLFENKGYKAARLCYSAVSNYSKLASTLVYLGDYQAAVDTARKASNIKVWKLV NDACIEKKEFKLAQICGLNLIVHAEELDELVERYESNGYFEELISLFEAGLGLERAHM GMFTELAILYSKYEPDKTFEHLKLFWSRINIPKVIRAVEQAHLWSELVFLYAHYDEWD NAALTLIEKSTKDLDHAYFKEVVVKVSNLEIYYKAINFYVKFHPSLLVDLLTSLTPRL DIPRTVKIFSKSDNLPLIKPFLINVLPKNNSVVNQAYHDLMIEEEDYKALQDAVDSYD KFDQLGLASRLESHKLIFFKKIAALLYRRNKKWAKSLSILKEEKLWKDAIETAAISQD PKVVEALLTYFVETGNREGFVALLYAAYNLVRIEFVLEISWMNSLEDYIKPFEISIKK EQNDSIKKITEELAKKSGSNEEHKDGQPLMLMNSAMNVQPTGF" gene 106466..108712 /gene="Pox1" /locus_tag="R008_G10391" mRNA 106466..108712 /gene="Pox1" /locus_tag="R008_G10391" /product="Pox1p" CDS 106466..108712 /gene="Pox1" /locus_tag="R008_G10391" /note="Similar to YGL205W 'Fatty-acyl coenzyme A oxidase, involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix'" /codon_start=1 /product="Pox1p" /protein_id="EWG86193.1" /translation="MTRRTTINPDSVVLNPQKFIQKERADSKIKVDQVNTFLESSPER RTLTHALIDQIVNDPILKTDTDYYDATKLQEREITAKKIARLASYMEHDIKTVRKHFR NTDLMKELQANDPDKASPLTNKDLFIFDKRLSLVANIDPQLGTRVGVHLGLFGNCIKG NGTDEQIRYWLQERGATLMKGIYGCFAMTELGHGSNVAQLQTRAVYDKQNDTFIIDTP DLTATKWWIGGAAHSATHAAVYARLIVEGKDYGVKTFVVPLRDPSTFQLLAGVSIGDI GAKMGRDGIDNGWIQFRNVVIPREFMLSRFTKVVRSPDGSVTVKTEPQLDQISGYSAL LSGRVNMVMDSFRFGSKFATIAVRYAVGRQQFAPRKGLSETQLIDYPLHQYRVLPQLC VPYLVSPVAFKLMDNYYSTLDELYNASSSADKAALVTVSKKLKNLFIDSASLKATNTW LIATLIDELRQTCGGHGYSQYNGFGKGYDDWVVQCTWEGDNNVLSLTSAKSILKKFID SATKGRFDNTLDVDSFSYLKPQYIGSVVSGETKSSLKELGDYTEIWSITLIKLLAHIG TLVEKSRSIDSVSKLLVLVSKFHALRCMLKTYYDKLNSRDSHISDEITKESMWNVYKL FSLYFIDKHSGEFQQFKIFTPDQISKVVQPQLLALLPIVRKDCIGLTDSFELPDAMLN SPIGYFDGDIYHNYFNEVCRNNPVEADGAGKPSYHALLSSMLGRGFEFDQKLGGAANA EILSKINK" gene complement(108932..109003) /locus_tag="R008_G10401" tRNA complement(108932..109003) /locus_tag="R008_G10401" /product="tRNA-His" /note="TH(GUG)G1" gene complement(110200..112413) /gene="Kex1" /locus_tag="R008_G10411" mRNA complement(110200..112413) /gene="Kex1" /locus_tag="R008_G10411" /product="Kex1p" CDS complement(110200..112413) /gene="Kex1" /locus_tag="R008_G10411" /note="Similar to YGL203C 'Protease involved in the processing of killer toxin and alpha factor precursor; cleaves Lys and Arg residues from the C-terminus of peptides and proteins'" /codon_start=1 /product="Kex1p" /protein_id="EWG86194.1" /translation="MFYNRWLGTWLAMSALIRISVSLPSSEEYKVAYELLPGLSEVPD PSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCS SMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKN KFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFS KIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNL INSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGMNW PKDVSFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKPSIHLLPGLLE SGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEF SGYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDVMIIDNNGKNVMITTDDD SDQDATTESGDKPKENLEEEEQEAQNEEGKEKEGNKDKDGDDDNDNDDDDEDDHNSEG DDDDDDDDDDDDDDDDDEDDNNEKQSNQGLEDSRHKSSEYEQEEEEVEEFAEEISMYK HKAVVVTIVTFLIVVLGVYAYDRRVRRKARHTILVDPNNRQHDSPNKTVSWADDLESG LGAEDDLEQDEQLEGGAPISSTSNKAGSKLKTKKKKKYTSLPNTEIDESFEMTDF" assembly_gap 113136..118407 /estimated_length=5272 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 118526..118621 /locus_tag="R008_G10416" tRNA 118526..118621 /locus_tag="R008_G10416" /product="tRNA-Lys" /note="TK(UUU)G1" gene 119101..120603 /gene="Aro8" /locus_tag="R008_G10421" mRNA 119101..120603 /gene="Aro8" /locus_tag="R008_G10421" /product="Aro8p" CDS 119101..120603 /gene="Aro8" /locus_tag="R008_G10421" /note="Similar to YGL202W Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis" /codon_start=1 /product="Aro8p" /protein_id="EWG86195.1" /translation="MTLPESRDFSYLFSDETNARKPSPLKTCIHLFQDPNIIFLGGGL PLKDYFPWDNLSVDSPKPPFPQGIGAPIDEQNCIKYTVNKDYADKSANPSNDIPLSRA LQYGFSAGQPELLNFIRDHTKIIHDLKYKDWDVLATAGNTNAWESTLRVFCNRGDVIL VEAHSFSSSLASAEAQGVITFPVPIDADGIIPEKLAKVMENWTPGAPKPKLLYTIPTG QNPTGTSIADHRKEAIYKIAQKYDFLIVEDEPYYFLQMNPYIKDLKEREKAQSSPKQD HDEFLKSLANTFLSLDTEGRVIRMDSFSKVLAPGTRLGWITGSSKILKPYLSLHEMTI QAPAGFTQVLVNATLSRWGQKGYLDWLLGLRHEYTLKRDCAIDALYKYLPQSDAFVIN PPIAGMFFTVNIDASVHPEFKTKYNSDPYQLEQSLYHKVVERGVLVVPGSWFKSEGET EPPQPAESKEVSNPNIIFFRGTYAAVSPEKLTEGLKRLGDTLYEEFGISK" gene complement(120896..123940) /gene="Mcm6" /locus_tag="R008_G10426" mRNA complement(120896..123940) /gene="Mcm6" /locus_tag="R008_G10426" /product="Mcm6p" CDS complement(120896..123940) /gene="Mcm6" /locus_tag="R008_G10426" /note="Similar to YGL201C 'Protein involved in DNA replication; component of the Mcm2-7 hexameric complex that binds chromatin as a part of the pre-replicative complex; forms a subcomplex with Mcm4p and Mcm7p'" /codon_start=1 /product="Mcm6p" /protein_id="EWG86196.1" /translation="MSSPFPADTPSSNRPSNSSPPPSSIGAGFGSSSGLDSQIGSRLH FPSSSQPHVSNSQTGPFVNDSTQFSSQRLQTDGSATNDMEGNEPARSFKSRALNHVKK VDDVTGEKVREAFEQFLEDFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSM RENGALAMAISEQYYRFLPFLQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADDDEQ QDDDMNGSSLPRDSGSSAAPGNGTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRI RDIRSEKIGSLLSISGTVTRTSEVRPELYKASFTCDMCRAIVDNVEQSFKYTEPTFCP NPSCENRAFWTLNVTRSRFLDWQKVRIQENANEIPTGSMPRTLDVILRGDSVERAKPG DRCKFTGVEIVVPDVTQLGLPGVKPSSTLDTRGISKTTEGLNSGVTGLRSLGVRDLTY KISFLACHVISIGSNIGASSPDANSNNRETELQMAANLQANNVYQDNERDQEVFLNSL SSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEGIKLR GDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGDYTIE AGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAA NPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHMKRDE AIEPPFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKELRKDDAQGFSRSSYRITVR QLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSIIRVDVDDVEMDEEFDNIESQS HAASGNNDDGTGSGVITSEPPADIEEGQSEATARPGTSEKKKTTVTYDKYVSMMNMIV RKIAEVDREGAEELTAVDIVDWYLLQKENDLGSLAEYWEERRLAFKVIKRLVKDRILM EIHGTRHNLRDLENEENENNKTVYVIHPNCEVLDQLEPQDSS" gene 125303..125375 /locus_tag="R008_G10436" tRNA 125303..125375 /locus_tag="R008_G10436" /product="tRNA-Lys" /note="TK(CUU)G1" gene complement(125727..126338) /gene="Emp24" /locus_tag="R008_G10441" mRNA complement(125727..126338) /gene="Emp24" /locus_tag="R008_G10441" /product="Emp24p" CDS complement(125727..126338) /gene="Emp24" /locus_tag="R008_G10441" /note="Similar to YGL200C Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles, which function in ER to Golgi transport" /codon_start=1 /product="Emp24p" /protein_id="EWG86197.1" /translation="MASFATKFVIACFLFFSASAHNVLLPAYGRRCFFEDLSKGDELS ISFQFGDRNPQSSSQLTGDFIIYGPERHEVLKTVRDTSHGEITLSAPYKGHFQYCFLN ENTGIETKDVTFNIHGVVYVDLDDPNTNTLDSAVRKLSKLTREVKDEQSYIVIRERTH RNTAESTNDRVKWWSIFQLGVVIANSLFQIYYLRRFFEVTSLV" gene 126624..127331 /gene="Yip4" /locus_tag="R008_G10451" mRNA 126624..127331 /gene="Yip4" /locus_tag="R008_G10451" /product="Yip4p" CDS 126624..127331 /gene="Yip4" /locus_tag="R008_G10451" /note="Similar to YGL198W 'Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport'" /codon_start=1 /product="Yip4p" /protein_id="EWG86198.1" /translation="MSYGREDTTIEPDFIEPDAPLAASGGVADNIGGTMQNSGSRGTL DETVLQTLKRDVVEINSRLKQVVYPHFPSFFSPSDDGIGAADNDISANCDLWAPLAFI ILYSLFVSHARSLFSSLFVSSWFILLVMALHLRLTKPHQRVSLISYISISGYCLFPQV LNALVSQILLPLAYHIGKQNRWIVRVLSLVKLVVMALCLMWSVAAVSWVTKSKTIIEI YPLALCLFGMAWLSTIL" gene 127730..132193 /gene="Mds3" /locus_tag="R008_G10456" mRNA 127730..132193 /gene="Mds3" /locus_tag="R008_G10456" /product="Mds3p" CDS 127730..132193 /gene="Mds3" /locus_tag="R008_G10456" /note="Similar to YGL197W 'Putative component of the TOR regulatory pathway; negative regulator of early meiotic gene expression; required, with Pmd1p, for growth under alkaline conditions; has an N-terminal kelch-like domain'" /codon_start=1 /product="Mds3p" /protein_id="EWG86199.1" /translation="MPLLQPSACFCYPLKLPPLPLASDSNEFDECARKRLTLDYRTGS AVTLTRSNIFVHGGLTIPLNLPVVNSMQLQKELILFFAKEKNNGSSFRNLNEWISKET FFLDLMSRTWYRVKTSFDQRTEELLKAESSSAKADNDTNEIKTDIKKGKSLESPLKER LFHSLCYLDGCLYIFGGLTVSPQSGYELIATNELWKLDLNTKKWSLLSDDPQIARRFN HTMHVKNENNDNRDTKLIIVGGLNNMDQPVKKIDIYNISQNCWQSETIPKQPMEITTN VNGIPLALSKDQNFSILVENNEANVPTLAFYMRSDQIDEYLGKYPSKIKENSPIVALP LLSESQGIRMPSNPALPKKLLNVPYELLAPTGDYFGFNIIIGGFHPNYQSSNFHCFIY DINSGKWSRVATACPDCDINKHRFWRVFVWKSHHQTILLGTKTDDYYSPSVQRFDHLS TFGLPLVNIFNKTIQLPHHRISASSLPIPIENFAKHKDTPLKKVSFTSSATSQFENYI RYIAPPLEMSSIQSMFPPYAMVLGKDALEIYGKPLSDFEFITSEGDSIGIPCYLLRKR WGRYFDMLLSQSYTKVCADYETTGTQSTLIKFSPHSSRNSSKAVRQEGRLSSSGSLDN YFEKNFPIFARTSVSEAQNTQPQVANADAKAPNTPSTSDEPSSSSSSDLYSTPHYQRN NDEEDDEDPVSPKPVSKSNSIYRPIRKTESSSTTSSSNGMIFRVPFKEKAAVTSNTEA LLESNLSLQELSRRRSSLMSIPSGELLRSSISEAEHQRRASHPLTSSPLFEDSGTPCG KQLQQLQQHTIQNPHNHLSPRRFSRSARSSISYVSSSSDRRGNSISSRSTSDSFGTPP VLGVLNVPLPPQTREPNEPPPPCPAMSTCSNTRRSNTLTDYMHSNKASPFSSRRSSHI GRRSSTPETENAFSATPRASLDGQMLGKSLKEGSTSQYTQPRMNSFPKANETIQTPTS SNNEWSRQSVTSNTDSFDSLQSNFALELEPLLTPRSLYMPWPTSTVRAFAEFFYTGQV NSKWLLAPVALDLLVMAKIYEIPLLYKLILEVLYSILAKKEESLSLICTSLMETFRTK TLNSYKGDEEKTNTYLTSNDNYQELLKLKVSLENIDNGYYDPDLLRKQSRAQSSSTQE SSGSANGEKTATGAGSLETSSTNVPTVFAGGPRDSHNSVGSIGFPNSMNIQGSRRSTS GFSPRVKMKSSLSKEIDPKTFYEEYEPKEGKSFDDNDDQQTNIGSFNLHLFDMNYGSI SSSSTNSISSSDLEEKEEQGQLQDLLEIEREDSAEILDARFRNKEDDKVTKDISKDKK RNYLPHEKNNLKAKEGKETRDVREEEEEFDFGLGMLSLNKIKREAKHVDKVDDSVDPL FKSSAFPQSPIRAYGSTTRSSSASGKPFRDNRSFNAFSVLTLENMASANALPPVDYVI KSIYRTTVLVNDIRLMVRCMDCMELSKNLRALKKKTMEDISKLKGICKPSP" gene 132915..134201 /gene="Dsd1" /locus_tag="R008_G10461" mRNA 132915..134201 /gene="Dsd1" /locus_tag="R008_G10461" /product="Dsd1p" CDS 132915..134201 /gene="Dsd1" /locus_tag="R008_G10461" /note="Similar to YGL196W 'D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate'" /codon_start=1 /product="Dsd1p" /protein_id="EWG86200.1" /translation="MSDVLSQYKGCSVRDLPTPNFVINEEKFDKNCTTMLNNVEKLSQ ECGVPIKFRAHVKTHKTAKGTLKQLGHGLPLAKRTTRAILVSTLKEAEELLNYQDRQC SDYIDDITYSLPCCVPEFIPLLSNLSRRVNNFQVFVDNIEHLENLKNFGRPASGKKWS VFIKVDMGTKRAGLAFDSPEFLSLLKKLTSSEIKEVIEPYGFYAHAGHSYSSTSINDT QNLLMEEVKAVNSAAKVLCSVDPQFDPSKLTLSVGATPTSNSLKLDNKSTLVKFVTTQ LVSTLEIHCGNYCMYDLQQVATGCVQDHELSGFVLGTVLSSYPSRGELLSNTGVMCLT REASSIKGFGICADLEHVLKSESFSREWYVARVSQEHGILRPIRNWNETTALKLGSKI AVLPQHACITMGQFPYYFVVNSQGIVNDVWLPFQKW" gene 134557..142575 /gene="Gcn1" /locus_tag="R008_G10466" mRNA 134557..142575 /gene="Gcn1" /locus_tag="R008_G10466" /product="Gcn1p" CDS 134557..142575 /gene="Gcn1" /locus_tag="R008_G10466" /note="Similar to YGL195W 'Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA'" /codon_start=1 /product="Gcn1p" /protein_id="EWG86201.1" /translation="MTAILNWEDISPVLEKGTRESHVSKRVPFLQDISQLVRQETLEK PQLSEIAFVLLNTFPIYEDNRSKSLVTSVLLDILNLEPCLLENFIRFISDVVISNPAT KAVADYLNLLDWINSFLIFVSHNSNLFEEYIPKLLVVHSYATFGVETILDNQEEGKKS QDKQNQHRKRIRYCIFQATVKAFLKCLKDNDDSISFMKISIKTVLESYSKLKITSVGV VMIMGALTQAALQLLSRQPALHSVLKENSAEKYCEYLGKEVFLGKNPPSSFCLEIGLK PFLKEFVSQELFIKFFIPNIEKAVLRSPEVGFSILSELYAGVSSEKVNLLNAFTSSKL INQYFSSFKSSKEVVRSVSLQSMIILLRKISNTDTTLEDLTKLIDEIFKNIKSNLNAD YKSLISKILIEIPLTHYEVSEKTCKGLSPYIGKEGNEAALTLMLNAFFVHYFSLGKPI EDLDKIISAGFADKKPALKKCWFAAFLNNSNAASEEVILNFIDGCLEFVKDSIIHYQT HGHACILASIEFTNKILALDNTELNDRVMQLIETLPENSSIGDAILTAALSTELSIEN RIHAVNLLQELFYKKPEFIGFSVIDAIERRMRVQELIPQQNTSFKYVTSVLLAITSEL PDKEASIKVLINALVIAQWNIFNIKNGWAGLVLRARLDPAEVVKEHASVIMEKILEIT GSCEWIDTIYGACGLQAAAYAAFIQPTEFTPILCKTIEADLTADDFSRLSEEDFEIFA GEEGVLVVDVLEESMNKKLSNKNSKEYETLMWEQKIRKEQAKKNVKKLSKEEQELVNE QLAKESAVRSHVSEISTRLKRGIRLVSELSKAACLVQNGIAIWFPLAVTKLLYLCSEP NISKLTEDVNIVFLQLSQNVSERLGNIRLFLGLATLRVHNANGISQDYLQEPLVELLT RVLFRIKFVSNQAAIDPISLTYILPLLINVLEKGKAIALKNADKPVVKAEFVEEDEEE EHLLLAMEIISVHAEAFEDPSIPRISIVEVLLSLLSLPSKAKIAKDCFNALCQSISVA PNQEDLDMILSNLLSPNQFVRSTILETLDNEFELEPFMKYSPEVFICRFDSDPSNREI ADFIWEFNKFVVNDELLKSIFPLFNQDDSGLRLFAANAYAFGAVSLFTSEENSSKDYL NDLLNFYKERAKPLEPILDQFGLVLVSASEQKDPWQGRSTVAITLKIMAKAFSAEDDT VVNIIKFLVDDGGLVDREPIVRQEMKEAGVELITLHGSQNSKDLIPIFEEALSSSTDS ALKENVIILYGTLARHLQQSDARIHTIIERLLSTLDTPSADIQQAVSACIAPLVFQFK QKVGDYLGILMEKLLNPTVASSMRKGAAWGIAGLVKGYGISALSEFDIIRNLIEAAED KKEPKRRESVGFCFQYLSESLGKFFEPYVIEILPNILKNLGDAVPEVRDATARATKAI MAHTTGYGVKKLIPVAVSNLDEIAWRTKRGSVQLLGNMAYLDPTQLSASLSTIVPEIV GVLNDSHKEVRKAADESLKRFGEVIRNPEIQKLVPVLLQAIGDPTKYTEEALDSLIQT QFVHYIDGPSLALIIHIIHRGMHDRSANIKRKACKIVGNMAILVDTKDLIPYLQQLID EVEIAMVDPVPNTRATAARALGALVERLGEEQFPDLIPRLLDTLSDESKSGDRLGSAQ ALAEVISGLGLTKLDEMLPTILAGVTNFRAYIREGFMPLLLFLPVCFGSQFAPYINQI IQPILSGLADNDENIRDTALKAGKLIVKNYATKAVDLLLPELERGMFDENDRIRLSSV QLTGELLFQVTGISSRNEFSEEDGDHNGEFSGKLVDVLGQDRRDRILAALFVCRNDTS GIVRATTVDIWKALVPNTPRAVKEILPTLTGMIVTHLASSSNVLRNIAAQTLGDLVRR VGGNALSQLLPSLEESLIETSNSDSRQGVCIALYELIESASTETISQFQSTIVNIIRT ALIDESATVREAAALSFDVFQDVVGKTAVDEVLPYLLHMLESSDNSDFALLGLQEIMS KKSDVIFPILIPTLLAPPIDAFRASALGSLAEVAGSALYKRLSIIINALVDAIIGTSE DESTKGALELALDRVFLSVNDDEGLHPLLQQIMSLLKSDNIEKRIAVLERLPNFFDKT VLDFDVYIPNFVSHAILSLDDEDQRVVNGNFNALSTLLKKVDKPTLEKLVKPAKQSLA LTGRQGQDVAAFKLPRGPNCILPIFLHGLMYGSNDEREESALAIADVVSKTPAANLKP FVSVITGPLIRVVGERFSSDIKAAILFALNVLFIKIPMFLRPFIPQLQRTFVKSLSDA TNETLRLRAAKALGALIEHQPRVDPLVIELVTGAKQATDEGVKTAMLKALLEVIMKAG SKLNENSKTNIVNLVEEEMLGSNDKLAVAYAKLIGSLSEILSNDEAHKILQDKVLNAD LDGETGKFAILTLNSFLKDAPTHIFNTGLIDEFVSYILNAIRSPDVYFGENGTIAAGK LLLLEGEKRSPFVKKDAAEPFKIGDENINLLINELSKAVLQPASNSTDVRRLALVVIR TLARFKFDECIKQFFDVVGPSVFSCLRDPVIPIKLAAEKAYLALFKLVEEDDMHTFNE WFAEISDRGSSIETVTGTTIQLRSVGDYTKRVGKRLANVERERIAAGGDAETMFSDRF EDEREIWAVGGVELTTDA" gene complement(142751..142993) /locus_tag="R008_G10471" mRNA complement(142751..142993) /locus_tag="R008_G10471" /product="hypothetical protein" CDS complement(142751..142993) /locus_tag="R008_G10471" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86202.1" /translation="MSNKEITCIKPFKIIALTLLIVLIINLSYKLFLRRYLKSSVIWC LGIANTDRNDIMWWQVSPLLERWVWQLVDNYESGYE" gene complement(143411..144778) /gene="Hos2" /locus_tag="R008_G10476" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(144968..145277) /locus_tag="R008_G10481" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 145296..147098 /gene="Ime4" /locus_tag="R008_G10486" mRNA 145296..147098 /gene="Ime4" /locus_tag="R008_G10486" /product="Ime4p" CDS 145296..147098 /gene="Ime4" /locus_tag="R008_G10486" /note="Similar to YGL192W 'Probable mRNA N6-adenosine methyltransferase required for entry into meiosis; transcribed in diploid cells; haploids repress IME4 transcription via production of antisense IME4 transcripts; antisense transcription is repressed in diploids'" /codon_start=1 /product="Ime4p" /protein_id="EWG86203.1" /translation="MINDKLVHFLIQNYDDILRAPLSGQLKDVYSLYISGGYDDEMQK LRNGKDDVLQFEQFWNDLQDIIFATPQSIQFDQNLLVADRPEKIVYLDVFSLKILYNK FHAFYYTLKSSSSSCEEKVSSSTTKPGADSEKDQLLGRLLGVLNWDVNVSNQGLPREQ LSNRLQNLLREKPSSFQLAKERAKYTTEVIEYIPICSDYSHASLLSTSVYIVNNKIVS LQWSKISACQENHPGLIECIQSKIHFIPNIKPQTDISLGDCSYLDTCHKLNTCRYIHY LQYIPSCLQERADRETASENKRIRSNVSIPFYTLGNCSAHCIKKALPAQWIRCDVRKF DFRVLGKFSVVIADPAWNIHMNLPYGTCNDIELLGLPLHELQDEGIIFLWVTGRAIEL GKESLNNWGYNVINEVSWIKTNQLGRTIVTGRTGHWLNHSKEHLLVGLKGNPKWINKH IDVDLIVSMTRETSRKPDELYGIAERLAGTHARKLEIFGRDHNTRPGWFTIGNQLTGN CIYEMDVERKYQEFMKSKTGTSHTGTKKIDKKQPSKLQQQHQQQYWNNMDMGSGKYYA EAKQNPMNQKHTPFESKQQQKQQFQTLNNLYFAQ" gene 147858..148247 /gene="Cox13" /locus_tag="R008_G10491" mRNA 147858..148247 /gene="Cox13" /locus_tag="R008_G10491" /product="Cox13p" CDS 147858..148247 /gene="Cox13" /locus_tag="R008_G10491" /note="Similar to YGL191W 'Subunit VIa of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP'" /codon_start=1 /product="Cox13p" /protein_id="EWG86204.1" /translation="MFRQCAKRYASSLPPNALKPAFGPPDKVAAQKFKESLMATEKHA KDTSNMWVKISVWVALPAIALTAVNTYFVEKEHAEHREHLKHVPDSEWPRDYEFMNIR SKPFFWGDGDKTLFWNPVVNRHIEHDD" gene complement(148855..150435) /gene="Cdc55" /locus_tag="R008_G10496" mRNA complement(148855..150435) /gene="Cdc55" /locus_tag="R008_G10496" /product="Cdc55p" CDS complement(148855..150435) /gene="Cdc55" /locus_tag="R008_G10496" /note="Similar to YGL190C 'Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), which has multiple roles in mitosis and protein biosynthesis; involved in regulation of mitotic exit; found in the nucleus of most cells, also at bud neck and bud tip'" /codon_start=1 /product="Cdc55p" /protein_id="EWG86205.1" /translation="MAQNNFDFKFSQCFGDKADIVVTEADLITAVEFDYTGNYLATGD KGGRVVLFERSNSRHCEYKFLTEFQSHDAEFDYLKSLEIEEKINEIKWLRPTQRSHFL LSTNDKTIKLWKVYEKNIKLVSQNNLTEGVTFAKKGKPDNHNSRGGSVRAVLSLQSLK LPQLSQHDKIIAATPKRIYSNAHTYHINSISLNSDQETFLSADDLRINLWNLDIPDQS FNIVDIKPTNMEELTEVITSAEFHPQECNLFMYSSSKGTIKLCDMRQNSLCDNKTKTF EEYLDPINHNFFTEITSSISDIKFSPNGRYIASRDYLTVKIWDVNMDNKPLKTINIHE QLKERLSDTYENDAIFDKFEVNFSGDSSSVMTGSYNNNFMIYPNVVTSGDNDNGIVKT FDEHNAPNSNSNKNIHNSIQNKDSSSSGNSHKRRSNGRNTGMVGSSNSSRSSIAGGEG ANPEDSGTEMNEIVLQADKTAFRNKRYGSLAQRSARNKDWGDDIDFKKNILHFSWHPR ENSIAVAATNNLFIFSAL" gene complement(151272..151631) /gene="Rps26a" /locus_tag="R008_G10501" mRNA complement(151272..151631) /gene="Rps26a" /locus_tag="R008_G10501" /product="Rps26ap" CDS complement(151272..151631) /gene="Rps26a" /locus_tag="R008_G10501" /note="Similar to YGL189C 'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps26Bp and has similarity to rat S26 ribosomal protein'" /codon_start=1 /product="Rps26ap" /protein_id="EWG86206.1" /translation="MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNI VEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPR FNRENKVSPADAAKKAL" gene complement(151867..152007) /locus_tag="R008_G10506" mRNA complement(151867..152007) /locus_tag="R008_G10506" /product="hypothetical protein" CDS complement(151867..152007) /locus_tag="R008_G10506" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86207.1" /translation="MLTTQKCESREGKNDEIFELGESNSDKILLKHGKCNLFSERKPV NH" gene complement(152747..153214) /gene="Cox4" /locus_tag="R008_G10521" mRNA complement(152747..153214) /gene="Cox4" /locus_tag="R008_G10521" /product="Cox4p" CDS complement(152747..153214) /gene="Cox4" /locus_tag="R008_G10521" /note="Similar to YGL187C 'Subunit IV of cytochrome c oxidase, the terminal member of the mitochondrial inner membrane electron transport chain; precursor N-terminal 25 residues are cleaved during mitochondrial import; phosphorylated; spermidine enhances translation'" /codon_start=1 /product="Cox4p" /protein_id="EWG86208.1" /translation="MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPE TLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIES YDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH" gene complement(154080..155819) /gene="Tpn1" /locus_tag="R008_G10526" mRNA complement(154080..155819) /gene="Tpn1" /locus_tag="R008_G10526" /product="Tpn1p" CDS complement(154080..155819) /gene="Tpn1" /locus_tag="R008_G10526" /note="Similar to YGL186C 'Plasma membrane pyridoxine (vitamin B6) transporter; member of the purine-cytosine permease subfamily within the major facilitator superfamily; proton symporter with similarity to Fcy21p, Fcy2p, and Fcy22p'" /codon_start=1 /product="Tpn1p" /protein_id="EWG86209.1" /translation="MNRDNMDTTKRKEDHTKHTTDVIEFYEEGTAASSLNIATEKANS SPSILRRIINRAAWLSKKVDAMGVESTGIQRISPYERGTSKKQFLHVAGLWLSATGGL SSMSSFLLGPLLFGLSFRESVASSLISVTIGCLIAAYCSIMGPQSGCRQMVTARYLFG WWFVKLVALASIIGVMGWSVVNSVVGGEMLAAISNDKVPLWVGIVIVTVCSFLVAIFG IKQVIKVETYLSVPVLTAFLLLYISSSDKYSFVNAYVSKGNLDSSTRKGNWMSFFSLC YSITATWGSITADYYILFPEDTPYIQIFCLTFFGTFLPTCFVGILGLLLASVAMSYKP WSVEYDSHGMGGLLWAGFQRWNGFGKFCVVVLVFSLVSNNIINTYSAAFSIQLSSVFC AKIPRWFWSIVCTIICLVCALIGRNHFSTILGNFLPMIGYWISMYFILLFEENLVFRR FFLHLYTKEFPTVTGEINGPELVGSSKEVEKDAVTNIHLLKRKHKVTKHRYNWDKWED YEVLTHGYAATFAFIVGVAGVVVGMAQAYWIGPIAAKFGEYGGDVAMWLSMAFSGVVY PPCRYLELRKFGR" gene complement(156210..157349) /locus_tag="R008_G10531" mRNA complement(156210..157349) /locus_tag="R008_G10531" /product="hypothetical protein" CDS complement(156210..157349) /locus_tag="R008_G10531" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86210.1" /translation="MCDSPATTGKPTILFIADPCETSATLNSKAFKEKFRILRYQLDT KEAFLNFLERHEQDKICAIYAGFPAFKKIGGMTRSIIEHKSFPRKNLKCIVLCSRGYD GWDLDTLRKHEIRLYNYQDDENEKLIDDLKLHQVGNDVADCALWHILEGFRKFSYYQK LSRETGNTLTARAKAAEKSGFAFGHELGNMFAESPRGKKCLILGLGSIGKQVAYKLQY GLGMEIHYCKRSEDCTMSQNESWKFHLLDETIYAKLYQFHAIVVTLPGTPQTEHLINR KFLEHCNPGLILVNLGRGKILDLRAVSDALVTGRINHLGLDVFNKEPEIDEKIRSSDR LTSITPHLGSATKDVFEQSCELALTRILRVVSGEAASDEHFSRVV" gene complement(157657..159054) /gene="Str3" /locus_tag="R008_G10536" mRNA complement(157657..159054) /gene="Str3" /locus_tag="R008_G10536" /product="Str3p" CDS complement(157657..159054) /gene="Str3" /locus_tag="R008_G10536" /note="Similar to YGL184C 'Peroxisomal cystathionine beta-lyase, converts cystathionine into homocysteine; may be redox regulated by Gto1p'" /codon_start=1 /product="Str3p" /protein_id="EWG86211.1" /translation="MPIKRLDTVVVNTGSQNDQHSASVPPVYLSTTFKVDLNNEDAQN YDYSRSGNPTRSVLQHQIGKLYRVPQENVLAVSSGMTALDVILRGLVLLNGTDNHTPT IIAGDDLYGGTQRLLNFFKQQSHAVSVHVDTSDFEKFKTVFQSLDKVDCVLLESPTNP LCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGH HDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMI LAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFETGSFEHSK RLVSSKKLSIWAVTVSFGCVNSLLSMPCKMSHASIDPELRKERDFPEDLVRLCCGIEN IVDLKKDLLAAMVDADIIEVRENGKYLFNKLNKNLAVNTTIDDLHKPLSIYEEFYNQD LIRKDSELNIKSSKL" gene complement(159569..160311) /gene="Mnd1" /locus_tag="R008_G10541" mRNA complement(join(159569..160225,160309..160311)) /gene="Mnd1" /locus_tag="R008_G10541" /product="Mnd1p" CDS complement(join(159569..160225,160309..160311)) /gene="Mnd1" /locus_tag="R008_G10541" /note="Similar to YGL183C 'Protein required for recombination and meiotic nuclear division; forms a complex with Hop2p, which is involved in chromosome pairing and repair of meiotic double-strand breaks'" /codon_start=1 /product="Mnd1p" /protein_id="EWG86212.1" /translation="MGPKRQTVSLQEKKNRILNFFQETYTFYNIKELEKSIPKKCGIS PMIVKDLVQQMIDEDGVISVEKCGNINIYWCFKNQTLQKLYDSSELIKKKIQEVKCDI ATYKQELDKTLATGRRKKFTVGQKSYNREALLEKRKKIQDEIKKKSNSLQKIESIRWD AAKIQENKQQIRLKKVHLEKTTDNIEILIDYLYKKFFLKPEQIRKEFGIPEEFKEFTE V" gene 160932..162140 /gene="Gts1" /locus_tag="R008_G10551" mRNA 160932..162140 /gene="Gts1" /locus_tag="R008_G10551" /product="Gts1p" CDS 160932..162140 /gene="Gts1" /locus_tag="R008_G10551" /note="Similar to YGL181W 'Arf3p GTPase Activating Protein (GAP) that localizes to endocytic patches; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms; localizes to nucleus and induces flocculation when overexpressed'" /codon_start=1 /product="Gts1p" /protein_id="EWG86213.1" /translation="MRFRSSSHSLKHVDRELKDLINSSENANKCGECGNFYPTWCSVN LGVFLCGRCASVHRKVFGSRDDDAFSNVKSLSMDRWTREDIDELVSLGGNKGNARFWN PKNVPFPFDGDDDKAIVEHYIRDKYILGKFRYDEIKPEDFGSRMDDFDGESDRFDERN RSRSRSRSHSFYKRGHNRSDYGGSRDSFQSSGSRYSRQLAELKDMGFGDTNKNLDALS SAHGNINRAIDYLEKSSSSRNSVSAAATTSTPPLPRRRATTSGPQPAIFDGTNVITPD FTSNSASFVQAKPAVFDGTLQQYYDPATGMIYVDQQQYAMAMQQQQQQQQQLAVAQAQ AQAQAQAQVQAQAQAQAQAQAQAQQIQMQQLQMQQQQQAPLSFQQQAPLSFQQMSQGG NLPQGYFYTQ" gene 163109..165802 /gene="Atg1" /locus_tag="R008_G10561" mRNA 163109..165802 /gene="Atg1" /locus_tag="R008_G10561" /product="Atg1p" CDS 163109..165802 /gene="Atg1" /locus_tag="R008_G10561" /note="Similar to YGL180W 'Protein ser/thr kinase required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; structurally required for phagophore assembly site formation; during autophagy forms a complex with Atg13p and Atg17p'" /codon_start=1 /product="Atg1p" /protein_id="EWG86214.1" /translation="MGDIKNKDHTTSVNHNLMASAGNYTAEKEIGKGSFATVYRGHLT SDKSQHVAIKEVSRAKLKNKKLLENLEIEIAILKKIKHPHIVGLIDCERTSTDFYLIM EYCALGDLTFLLKRRKELMENHPLLRTVFEKYPPPSENHNGLHRAFVLSYLQQLASAL KFLRSKNLVHRDIKPQNLLLSTPLIGYHDSKSFHELGFVGIYNLPILKIADFGFARFL PNTSLAETLCGSPLYMAPEILNYQKYNAKADLWSVGTVVFEMCCGTPPFRASNHLELF KKIKRANDVITFPSYCNIEPELKELICSLLTFDPAQRIGFEEFFANKVVNEDLSSYEL EDDLPELESKSKGIVESNMFVSEYLSKQPKSPNSNLAGHQSMADNPAELSDALKNSNI LTAPAVKTDHTQAVDKKASNNKYHNSLVSDRSFEREYVVVEKKSVEVNSLADEVAQAG FNPNPIKHPTSTQNQNVLLNEQFSPNNQQYFQNQGENPRLLRATSSSSGGSDGSRRPS LVDRRLSISSLNPSNALSRALGIASTRLFGGANQQQQQQQITSSPPYSQTLLNSQLFH ELTENIILRIDHLQHPETLKLDNTNIVSILESLAAKAFVVYSYAEVKFSQIVPLSTTL KGMANFENRRSMDSNAIAEEQDSDDAEEEDETLKKYKEDCLSTKTFGKGRTLSATSQL SATFNKLPRSEMILLCNEAIVLYMKALSILSKSMQVTSNWWYESQEKSCSLRVNVLVQ WLREKFNECLEKADFLRLKINDLRFKHASEVAENQTLEEKGSSEEPVYLEKLLYDRAL EISKMAAHMELKGENLYNCELAYATSLWMLETSLDDDDFTNAYGDYPFKTNIHLKSND VEDKEKYHSVLDENDRIIIRKYIDSIANRLKILRQKMNHQN" gene complement(166452..168134) /gene="Tos3" /locus_tag="R008_G10566" mRNA complement(166452..168134) /gene="Tos3" /locus_tag="R008_G10566" /product="Tos3p" CDS complement(166452..168134) /gene="Tos3" /locus_tag="R008_G10566" /note="Similar to YGL179C 'Protein kinase, related to and functionally redundant with Elm1p and Sak1p for the phosphorylation and activation of Snf1p; functionally orthologous to LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome'" /codon_start=1 /product="Tos3p" /protein_id="EWG86215.1" /translation="MVLLKEPVQPLPRSSLLYNNASNSSSRIKETRKVKLLYNPLTKR QILNNFEILATLGNGQYGKVKLARDLGTGALVAIKILNRFEKRSGYSLQLKVENPRVN QEIEVMKRCHHENVVELYEILNDPESTKVYLVLEYCSRGPVKWCPENKMEIKAVGPSI LTFQQSRKVVLDVVSGLEYLHSQGITHRDIKPSNLLISSNGTVKISDFGVAMSTATGS TNIQSSHEQLLKSRALGTPAFFAPELCSTEKEYSCSSAIDIWSLGVTIYCLLFGKLPF NANSGLELFDSIINKPLEFPSYEEMLNGATSGITMEEYTDAKDLLKKLLQKDPDKRIK LADIKVHPFMCHYGKSDAASVSTNLETFHELKVSPPSSCKRVELVSLPVNSSFASLDS VYMENFDHNNLRTGADRNSTYSPSIYDANTLSPSAYHNIGSRESSYSSFSSFTSSTAF ASQISIQDAPAIGDQQCLIGESGSSLRVNSCEFPQYTTMSPVGEYPFESTEASLSSTL TPVGNVPQRIKAHLVEGKSNSKDDLRIEADASLVFEASDAQRTRRRMSLYKL" gene 170401..173617 /gene="Mpt5" /locus_tag="R008_G10576" mRNA join(170401..170403,171041..173617) /gene="Mpt5" /locus_tag="R008_G10576" /product="Mpt5p" CDS join(170401..170403,171041..173617) /gene="Mpt5" /locus_tag="R008_G10576" /note="Similar to YGL178W 'Member of the Puf family of RNA-binding proteins; binds to mRNAs encoding chromatin modifiers and spindle pole body components; involved in longevity, maintenance of cell wall integrity, and sensitivity to and recovery from pheromone arrest'" /codon_start=1 /product="Mpt5p" /protein_id="EWG86216.1" /translation="MINNEPFPSADSASILTTSTSNNSLMSYNHQPQLSINSVQSLLE PVTPPPLGQMNNKRNHQKAHSLDLSGFNQFISSTQSPLALMNNTSTSNSANSFSPNPN AASNSTGLSASMANPPAILPLINEFDLEMDGPRRKSSHDFTVVAPSNSGVNTSSLIME TPSSSVTPAASLRNFSNSNNAASKCGVDNSSFGLSSSTSSSMVEISALPLRDLDYIKL ATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAK QKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVT LINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTL QQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVN LNVLIRDNFGNYALQTLLDVKNYSPLLAYNKNGNAIGQNSSSTLNYGNFCNDFSLKIG NLIVLTKELLPSIKTTSYAKKIKLKVKAYAEATGIPFTDISPQVTAMSHNNLQTINNE NKNPHNKNSHNHNHNHNHNHAHNNNNNNNQKSHTRHFSLPANAYHRRSNSSVTNNFSN QYAQDQKIHSPQQIMNFNQNAYPSMGAPSFNSQTNPPLVSHNSLQNFDNRQFANLMAH PNSAAPIHSFSSSNITNVNPNVSRGFKQPGFMMNETDKINANHFSPYSNANSQNFNES FVPRMQYQTEGANWDSSLSMKSQHIGQGPYNQVNMSRNASISNMPAMNTARTSDELQF TLP" gene complement(174482..176146) /locus_tag="R008_G10586" mRNA complement(174482..176146) /locus_tag="R008_G10586" /product="hypothetical protein" CDS complement(174482..176146) /locus_tag="R008_G10586" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86217.1" /translation="MTPNLPGFYYDRERRRYFRISENQSISTTGTTNQYRKDNIKRQC VEENYDKKFSMIKKKRQQTLQKYKLSLLNPLERAFRPLSYEKYMIGLNMQYASHSLTE GHHSHSSANVKSLNFPHRIQIGVLANCILLVTQEGCFHSKLVFATNKGYVAGFSSLDN FPEENFFTGFSMAELNPMLKYKSEPTDVFKTMKLERTVAIKEGPSHYFYHNVNTRSNV HTFAIFIQDFSSLKLLKIRQVKLKENCQVHDSLVVGDTLIITVNYRCHFYDLIPETFP NPYIFSPAKSSRKHKSRSDITSLSFCLQEDALSPLKKTNTGVFYLGYRNGDSMAIVFT NITNMTLQYSKTNGMASESRNQPIRNSPKSVVSIKALNNKGLMLISGMADKEDVQQLV IADTFLEDILTEIPVVSFKTKFLNVTKDTEILEISDDGRYFIYGSTSARDGKGDFEVF CTTLSGNLDYEKSEGGNITLYPIGGMKNYCRLENFQFESIHLHSAFIPPRYVKLFDAV EPLGEESSTSPYDIPEEGLSQKICILIRREDDPYNGANIFITSALT" gene complement(176352..177389) /gene="Sae2" /locus_tag="R008_G10591" mRNA complement(176352..177389) /gene="Sae2" /locus_tag="R008_G10591" /product="Sae2p" CDS complement(176352..177389) /gene="Sae2" /locus_tag="R008_G10591" /note="Similar to YGL175C 'Endonuclease that processes hairpin DNA structures with the MRX complex; involved in meiotic and mitotic double-strand break repair; phosphorylated in response to DNA damage and required for normal resistance to DNA-damaging agents'" /codon_start=1 /product="Sae2p" /protein_id="EWG86218.1" /translation="MVTGEENVYLKSSLSILKELSLDELLNVQYDVTTLIAKRVQALQ NRNKCVLEEPNSKLAEILCHEKNAPQQSSQTSAGPGEQDSEDFILTQFDEDIKKESAE VHYRNENKHTVQLPLVTMPPNRHKRKISEFSSPLNGLNNLSDLEDCSDTVIHEIDNDK ENKTRKLLGIELENPGSTSPNLYKNVKDNFLFDFNTNPLTKRAWILEDFRPNEDIAPV KRGRRKLERFYAQVGKPEDSKHRSLSVVIESQNSDYEFAFDNLRNRSKSPPGFGRLDF PSTQEGNEDKKKSQEIIRRKTKYRFLMASNNKIPPYEREYVFKREQLNQIVDDGCFFW SDKLLQIYARC" gene 177612..178412 /gene="Bud13" /locus_tag="R008_G10596" mRNA 177612..178412 /gene="Bud13" /locus_tag="R008_G10596" /product="Bud13p" CDS 177612..178412 /gene="Bud13" /locus_tag="R008_G10596" /note="Similar to YGL174W 'Subunit of the RES complex, which is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern'" /codon_start=1 /product="Bud13p" /protein_id="EWG86219.1" /translation="MALHQYLSETYGPTKPKNKTKKKKKESKSDANSDKTSLIVKERL STLQQEQEKSGVASFSKFDKQKSKNIWKNLETNELSHAITHPSASSIAGNESKNDLKE IRAQEPLVTVADKSKTRKTIYRDAQGHKIQEDSKIDDSSFSQSKYEDEKAAEREQYLK NLNMGDVQKLGINVDAHDKKKNQTASSLTIEDPAITFTHDKERTVKTSLLGRKLYDKP APENRFAIMPGSRWDGVHRSNGFEEKWFAKQNEINEKKVQSYTLQEDY" gene complement(178594..183180) /gene="Kem1" /locus_tag="R008_G10601" mRNA complement(178594..183180) /gene="Kem1" /locus_tag="R008_G10601" /product="Kem1p" CDS complement(178594..183180) /gene="Kem1" /locus_tag="R008_G10601" /note="Similar to YGL173C 'Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies involved in mRNA decay; plays a role in microtubule-mediated processes, filamentous growth, ribosomal RNA maturation, and telomere maintenance'" /codon_start=1 /product="Kem1p" /protein_id="EWG86220.1" /translation="MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCT HGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRF RTAMDAEKALKKAIENGDEIPKGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISNDSK WREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHG PHFALLREEVTFGRRNSEKKSLEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFER ILDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKR LGVWLNYLSQFELLNFEKDDIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIG SIKPWLMEQLQEKLSPDLPDEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSK GSYSLKMDLDSINPDETEEEFQNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERF ERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPR ISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYP AEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIYSFN PQVDNIYKSPLGGIFSDIEHNHCVEKEYITIPLDSSEIRYGLLPNAKLGAEMLAGFPT LLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNKVIYTRW PYLRESKLVSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSMLRMYAKQ KAVKIGPVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVVESVVNEDERYKER GPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFLDSEPTIGKERL QMDHQAVKYYPSYIVAKNMHLHPLFLSKITSKFMITDATGKHINVGIPVKFEARHQKV LGYARRNPRGWEYSNLTLNLLKEYRQTFPDFFFRLSKVGNDIPVLEDLFPDTSTKDAM NLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIEGHERKQLAKVP REAVLNPRSSFALLRSQKFDLGDRVVYIQDSGKVPIFSKGTVVGYTTLSSSLSIQVLF DHEIVAGNNFGGRLRTNRGLGLDASFLLNITNRQFIYHSKASKKALEKKKQSNNRNNN TKTAHKTPSKQQSEEKLRKERAHDLLNFIKKDTNEKNSESVDNKSMGSQKDSKPAKKV LLKRPAQKSSENVQVGLANFEKAPLDNPTVAGSIFNAVANQYSDGIGSNLNIPTPPHP MNVVGGPIPGANDVADVGLPYNIPPGFMTHPNGLHPLHPHQMPYPNMNGMSIPPPAPH GFGQPIPFPPPPPMTNVSDQGSRIVVNEKESQDLKKFINGKQHSNGSTIGGETKNSRK GEIKPSSGTNSTECQSPKSQSNAADRDNKKDEST" gene 183769..185187 /gene="Nup49" /locus_tag="R008_G10606" mRNA 183769..185187 /gene="Nup49" /locus_tag="R008_G10606" /product="Nup49p" CDS 183769..185187 /gene="Nup49" /locus_tag="R008_G10606" /note="Similar to YGL172W Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC), required for nuclear export of ribosomes" /codon_start=1 /product="Nup49p" /protein_id="EWG86221.1" /translation="MFGLNKASSTPAGGLFGQASGASTGNANTGFSFGGTQTGQNTGP STGGLFGAKPAGSTGGLGASFGQQQQQSQTNAFGGSATTGGGLFGNKPNNTANTGGGL SGANSNSNSGGLFGSNNAQTSGGLFGNNNTNNINNSSSGMNNASTGLFGSKPAGGTSL FGNTSTSSAPAQNQGMFGAKPAGTSLFGNNAGNTTTGGGLFGSKPTGATSLFGSSNNN NNNNNSNNIMSASGGLFGNQQQQLQQQPQMQCALQNLSQLPITPMTRISELPPQIRQE IEQLDQYIQKQVQISHHLKADTIDHDELIDSIPRDVAYLLKSESATSQYLKQDLKKIS SFKSLIDEDLLDTQTFSVLLQQLLTPGSKISSNDLDKFFQKKIHLYEKKLEDYCRILS DIETAVNGIDTDLFGAPNNPNSTAITADLGSSEAENLLQLKTGLAAIVSTVIEEFTLF MDIAERIAVLHQKTKTLASLSI" gene 185459..187153 /gene="Rok1" /locus_tag="R008_G10611" mRNA 185459..187153 /gene="Rok1" /locus_tag="R008_G10611" /product="Rok1p" CDS 185459..187153 /gene="Rok1" /locus_tag="R008_G10611" /note="Similar to YGL171W 'ATP-dependent RNA helicase of the DEAD box family; required for 18S rRNA synthesis'" /codon_start=1 /product="Rok1p" /protein_id="EWG86222.1" /translation="MDIFRVLTRGASVKKESGPKAKAADYSVINGKDENHKEDNNESQ IVKELDFFRNKRIISKVEDDREKTTENDSPNKEEKSGNDDGLIKPVITNTVEASALRK SYKGNVSGIDIPLPIGSFEDLISRFSFDRRLLNNLIENGFTEPTPIQCECIPVALNNR DVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSHK IFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNEALDLSKVKH LIFDEADKLFDKTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQSIMMDPVRVI IGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESITRAKALYHEL MYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVP GSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWMDKMAKM TRKEKESIKNGKAHKERKQITTVPKMDKAKRRRQQEMIAASKRRKNEELSKKHFSK" gene complement(187221..188462) /gene="Spo74" /locus_tag="R008_G10616" mRNA complement(187221..188462) /gene="Spo74" /locus_tag="R008_G10616" /product="Spo74p" CDS complement(187221..188462) /gene="Spo74" /locus_tag="R008_G10616" /note="Similar to YGL170C Component of the meiotic outer plaque of the spindle pole body, involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation" /codon_start=1 /product="Spo74p" /protein_id="EWG86223.1" /translation="MGAGTLLNGLEKENFPNNIHSDLPAYPNMDSQEDGNTSEESKRN SPVKQKSPKDEEKSSKMGTASNIFHENKDIHERSEHTDDFNDGLKLAPDSSPSLKECQ FKNWESFWCNTEGYKTKHMQPFHFTSGLEEIKEPVMELNISTSPYKGQRPNSAPTEYS AATTAFTKTQLEVSFLKTNLLTYIKKEIDICLSSVPFFDDAVQMQKKFLEYRDIDLDE EYELKILGELLNDLNFFHMQENSLLNRELAVRRFSNQPESQNLPSIRDFRNPLLPINN RPSPPLGLKRNGKSFEETYDFTSNTSNFWGEKAELQNSITGGTPYFFHPNNIHQTKPF MSFENQNELLFQRKNSDYKQHFNSGRNIHNGVESKSYRGVGLNDSYQKGYAAMTKSFG NIDLNRMPRRSNEEMYSWSRN" gene complement(188782..188854) /locus_tag="R008_G10621" tRNA complement(188782..188854) /locus_tag="R008_G10621" /product="tRNA-Lys" /note="TK(CUU)G2" gene 189126..190406 /gene="Sua5" /locus_tag="R008_G10626" mRNA 189126..190406 /gene="Sua5" /locus_tag="R008_G10626" /product="Sua5p" CDS 189126..190406 /gene="Sua5" /locus_tag="R008_G10626" /note="Similar to YGL169W 'Single-stranded telomeric DNA-binding protein, required for normal telomere length; null mutant lacks N6-threonylcarbamoyl adenosine (t6A) modification in the anticodon loop of ANN-decoding tRNA; member of conserved YrdC/Sua5 family'" /codon_start=1 /product="Sua5p" /protein_id="EWG86224.1" /translation="MYLGRHFLAMTSKALFDTKILKVNPLSIIFSPDAHIDGSLPTIT DPETEAALVEAARIIRDTDETVAFPTETVYGLGGSALNDNSVLSIYKAKNRPSDNPLI THVSSIDQLNRKVFNQPHLSGTSLFDNIPSIYRPLISSLWPGPLTILLPVPSSEHSAL SKLTTADQPTFAVRIPANPVARALIALSDTPIAAPSANASTRPSPTLASHVYHDLKDK IPIILDGGACKVGVESTVVDGLCNPPMLLRPGGFTYEEIVKLGGEAWSLCKVENKKTV EKGEKVRTPGMKYRHYSPSAKVVLLVPHCEGDGILKGVDRMERLKRLIETELKANRNI KKIAILTSLKLRDSDLQSKIFNEPDFSSKTFIIERLGQSGEEIQTNLFAALRKVDEND KVDLIFVEGINEEGEGLAVMNRLRKAAANNCIQF" gene 190498..190830 /gene="Hur1" /locus_tag="R008_G10631" mRNA 190498..190830 /gene="Hur1" /locus_tag="R008_G10631" /product="Hur1p" CDS 190498..190830 /gene="Hur1" /locus_tag="R008_G10631" /note="Similar to YGL168W 'Protein of unknown function; reported null mutant phenotype of hydroxyurea sensitivity may be due to effects on overlapping PMR1 gene'" /codon_start=1 /product="Hur1p" /protein_id="EWG86225.1" /translation="MFILVSVVNICTYIHLHMFPLIRTFTSIGLGVLMKDKGKEGKTI KAQNVTYQTFEKYVESSSFFFLVHNFLSSSTMKTLLLMSNNNSISEIPSFSVLKILWK NGIYIAHI" gene complement(190650..193502) /gene="Pmr1" /locus_tag="R008_G10636" mRNA complement(190650..193502) /gene="Pmr1" /locus_tag="R008_G10636" /product="Pmr1p" CDS complement(190650..193502) /gene="Pmr1" /locus_tag="R008_G10636" /note="Similar to YGL167C 'High affinity Ca2+/Mn2+ P-type ATPase required for Ca2+ and Mn2+ transport into Golgi; involved in Ca2+ dependent protein sorting and processing; mutations in human homolog ATP2C1 cause acantholytic skin condition Hailey-Hailey disease'" /codon_start=1 /product="Pmr1p" /protein_id="EWG86226.1" /translation="MSDNPFNASLLDEDSNREREILDATAEALSKPSPSLEYCTLSVD ETLEKLDTDKNGGLRSSNEANNRRSLYGPNEITVEDDESLFKKFLSNFIEDRMILLLI GSAVVSLFMGNIDDAVSITLAIFIVVTVGFVQEYRSEKSLEALNKLVPAECHLMRCGQ ESHVLASTLVPGDLVHFRIGDRIPADLRIIEAIDLSIDESNLTGENEPVHKTSQTIEK SSFNDQPNSIVPISERSCIAYMGTLVKEGHGKGIVVGTGTNTSFGAVFEMMNNIEKPK TPLQLTMDKLGKDLSLVSFIVIGMICLVGIIQGRSWLEMFQISVSLAVAAIPEGLPII VTVTLALGVLRMAKRKAIVRRLPSVETLGSVNVICSDKTGTLTSNHMTVSKLWCLDSM SNKLNVLSLDKNKKTKNSNGNMKNYLTEDVRETLTIGNLCNNASFSQEHAIFLGNPTD VALLEQLANFEMPDIRNTVQKVQELPFNSKRKLMATKILNPVDNKCTVYVKGAFERIL EYSTSYLKSKGKKTEKLTEAQKATINECANSMASEGLRVLGFAKLTLSDSSTPLTEDL IKDLTFTGLIGMNDPPRPNVKFAIEQLLQGGVHIIMITGDSENTAVNIAKQIGIPVID PKLSVLSGDKLDEMSDDQLANVIDHVNIFARATPEHKLNIVRALRKRGDVVAMTGDGV NDAPALKLSDIGVSMGRIGTDVAKEASDMVLTDDDFSTILTAIEEGKGIFNNIQNFLT FQLSTSVAALSLVALSTAFKLPNPLNAMQILWINILMDGPPAQSLGVEPVDHEVMKKP PRKRTDKILTHDVMKRLLTTAACIIVGTVYIFVKEMAEDGKVTARDTTMTFTCFVFFD MFNALACRHNTKSIFEIGFFTNKMFNYAVGLSLLGQMCAIYIPFFQSIFKTEKLGISD ILLLLLISSSVFIVDELRKLWTRKKNEEDSTYFSNV" gene 194162..194839 /gene="Cup2" /locus_tag="R008_G10641" mRNA 194162..194839 /gene="Cup2" /locus_tag="R008_G10641" /product="Cup2p" CDS 194162..194839 /gene="Cup2" /locus_tag="R008_G10641" /note="Similar to YGL166W 'Copper-binding transcription factor; activates transcription of the metallothionein genes CUP1-1 and CUP1-2 in response to elevated copper concentrations'" /codon_start=1 /product="Cup2p" /protein_id="EWG86227.1" /translation="MVVINGVKYACETCIRGHRAAQCTHTDGPLQMIRRKGRPSTTCG HCKELRRTKNFNPSGGCMCASARRPAVGSEEDETRCRCDEGEPCKCHTKRKSSRKSKG GSCHRRANDEAAHVNGLGIADLDVLLGLNGRSSDVDMTTTLPSLKPPLQNGEIKADSI DNLDLASLDPLEQSPSISMEPVSINETGSAYTTTNTALNDIDIPFSINELNELYKQVS SHNSHSQ" gene complement(195011..196333) /gene="Yrb30" /locus_tag="R008_G10651" mRNA complement(195011..196333) /gene="Yrb30" /locus_tag="R008_G10651" /product="Yrb30p" CDS complement(195011..196333) /gene="Yrb30" /locus_tag="R008_G10651" /note="Similar to YGL164C 'RanGTP-binding protein, inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes'" /codon_start=1 /product="Yrb30p" /protein_id="EWG86228.1" /translation="MDEILAKAGSQAVTFAIKSGISIASTYALKTITNFVVQIPKDDA RRIDQLKFKLESRMAIVSSAIDLIKLVAARGNTNLQITLRLTKDLKEEIDRFDEKINE MTQKVEGSRSAKTQNEAIKAVENYIKDLLLRIEEITPFINLSLTTSGANLNSALPYQL SPGLLLKASDFVSENNRKYEKAMKSNEKGTGDKEILKVQVGPTFEVTLFSIFYNLTSE NNGQSGIVWKEDMKRAKARIYRLNSTGRKYDYFMKIEQDFNDGRYHEDDDKEDTPQEL AIDLNHIKKLFFSVSGKLLRLEEQDSPVLVLKIDRSDDKENESSEGDKGLLDDITWYA VSGYEAIEEDEEEDEEEDEEEGKDGEERKEEEEEENKLEDKDSSITLLEYIIRLTSLQ SNDQKSILEVSDERLSIYLNDENTNSRKDRISNSTIEETEKKLKNLKL" gene complement(196741..199437) /gene="Rad54" /locus_tag="R008_G10661" mRNA complement(196741..199437) /gene="Rad54" /locus_tag="R008_G10661" /product="Rad54p" CDS complement(196741..199437) /gene="Rad54" /locus_tag="R008_G10661" /note="Similar to YGL163C 'DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family'" /codon_start=1 /product="Rad54p" /protein_id="EWG86229.1" /translation="MARRRLPDRPPNGIGAGERPRLVPRPINVQDSVNRLTKPFRVPY KNTHIPPAAGRIATGSDNIVGGRSLRKRSATVCYSGLDINADEAEYNSQDISFSQLTK RRKDALSAQRLAKDPTRLSHIQYTLRRSFTVPIKGYVQRHSLPLTLGMKKKITPEPRP LHDPTDEFAIVLYDPSVDGEMIVHDTSMDNKEEESKKMIKSTQEKDNINKEKNSQEER PTQRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQV EGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMA DEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLT PLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVG LMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGS RAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCK YEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFE DEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYT QTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN LIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKM SLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQLKRAPAM LYGDATTWNHLNHDALEKTNDHLLKNEHHYNDISFAFQYISH" gene 201143..202042 /gene="Sut1" /locus_tag="R008_G10671" mRNA 201143..202042 /gene="Sut1" /locus_tag="R008_G10671" /product="Sut1p" CDS 201143..202042 /gene="Sut1" /locus_tag="R008_G10671" /note="Similar to YGL162W 'Transcription factor of the Zn[II]2Cys6 family involved in sterol uptake; involved in induction of hypoxic gene expression'" /codon_start=1 /product="Sut1p" /protein_id="EWG86230.1" /translation="MSTSITVRNRDRSLPPLLLPNVSLLEKDIRRKGTQNVGITDPEL LLTTWMRKRAFPTDELLGGYKRLKPAAADSNECAIGIATVTPPPTLPVSAIVPPPQNY TPPLFEYHPHALASMVNEDANASCTQMSIISRSTSNSTTSSATSTSSISKRQRSGPSC DKCRLKKIKCNAKIEILLQDDTIMPMISNKLRYVLTPDDIRLYRGTLLRNIAIPDDVI EGTGSRKLIKHIDKLVLLTPCLPCIKKKHSSSSTNFPKNDKCTFSKGFTRADINISSK ISLKFKDKTIYDITYDDYKSIDF" gene complement(202215..203147) /gene="Yip5" /locus_tag="R008_G10676" mRNA complement(202215..203147) /gene="Yip5" /locus_tag="R008_G10676" /product="Yip5p" CDS complement(202215..203147) /gene="Yip5" /locus_tag="R008_G10676" /note="Similar to YGL161C 'Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport'" /codon_start=1 /product="Yip5p" /protein_id="EWG86231.1" /translation="MPSNNSSFLDIDDDLEGVDDFGNEPNPFDDATVPDSPNMNNSTA GKGSEFYNTTGSKAESAPLQGQMDPPAYDQVIGQNDNDGLGRNGLRPGLINYYSKYFQ IDLTQFKKRLSAVLTFRNDHNSESNEDNTDLYGAVWITATVVMINFTMSRGLNFIISD VIEGVKTGEDIDRASQFKKLLHSIWLFYGYTFGVPFITMQVLNRDEHSERNRSFKSVP ELISVYGYANLIWIPVCVILNILDMSKRLRTVQAIQWAIVALGWAQSSYFLNSQISSN NNTETQSNGKFSLSIIVVVALHTLFCLLFRFIIF" gene 203566..205278 /gene="Aim14" /locus_tag="R008_G10681" mRNA 203566..205278 /gene="Aim14" /locus_tag="R008_G10681" /product="Aim14p" CDS 203566..205278 /gene="Aim14" /locus_tag="R008_G10681" /note="Similar to YGL160W 'Protein with similarity to iron/copper reductases (FRE1-8), possibly involved in iron homeostasis; may interact with ribosomes; null mutant displays elevated frequency of mitochondrial genome loss'" /codon_start=1 /product="Aim14p" /protein_id="EWG86232.1" /translation="MKESPLITLVKRHSETHFANIKYGYYVLIISLVYLIGLALLRAF GRRTPSRSSSAFKNKIIYRLYDIDPAIHLGILFFAVLIPFYYHYSLTTQSTVYLKRLG RLSYALIPLNLFLTLRPNWFLRKNCTYTDFIPFHKWFSRIITVIGLLHGIFFIIKWAI DDNVSLKQKLILKTFNFVGFIISILVLFLLICSIGPMRRYNYRLFYIVHNLVNVAFIL LTPIHSRPGVKFPFLLLNCTLLFIHIINRIVFAKSLMILNKNANYSKTNLVHVRLPRA ILPDYFEPGSHIRISPYRRINPLYWLLPSHPYTIASLAEDNSIDLIIKETSTAEPGSQ IESLRSNPKSFHLDQEKTYTLINSYPPSVPEECYSQGTNIAIICGGSGISFALPLFRH FFNKENVKYLKMIWLIKNYSEYELVLDYLKTNGLTFEKKPSNNKRISVFISGEYTAET RLDEITTNIDDENSEYEMGSFNNEDEDLSISNFNSENADSNDKTPETSHSPTKENGSL IEVKSKHSFTLSNELKSFNNESAQVNQNETWLFSCGPPSLLQLSKKYCNDERINFVCE TYGL" gene 205726..206839 /locus_tag="R008_G10686" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 208527..208640 /locus_tag="R008_G10691" tRNA 208527..208640 /locus_tag="R008_G10691" /product="tRNA-Leu" /note="TL(CAA)G1" gene 210039..211577 /gene="Rck1" /locus_tag="R008_G10696" mRNA 210039..211577 /gene="Rck1" /locus_tag="R008_G10696" /product="Rck1p" CDS 210039..211577 /gene="Rck1" /locus_tag="R008_G10696" /note="Similar to YGL158W 'Protein kinase involved in the response to oxidative stress; identified as suppressor of S. pombe cell cycle checkpoint mutations'" /codon_start=1 /product="Rck1p" /protein_id="EWG86233.1" /translation="MSVNPEFIADGIDFYPTTPDAAYFNAADGKNKVNRINGNSENLH HSFASSCRRSSLSVDFNVTSSDSEKSEQSCLENNSQEDEYFCDIFSTELKLDETSNKS TDYSSSNHQYPEQLELHNYKLLNKIGEGAFSRVFKAVGINTDDQAPVVIKAIIKKGIS SDDTLKGNDRIQGSSRKKVLNEVAIHKLVSKNNPHCTKFIAFQESANYYYLVTELVTG GEIFDRIVQLTCFSEDLARHVITQVAIAIKHRHYMGIVHRDVKPENLLFEPIPFYGLD GDMQKEDEFTLGVGGGGIGLVKLMDFGLAKKLRNNTAKTPCGTIEYVAPEVFTSKRYS MKVDMWSIGCVLFTLLCGYPPFYEKNEKTLLKKISRGDYEFLAPWWDNISSGAKNAVT HLLEVDPNKRYDIDDFLNDPWLNSYDCLKDSNSNSYASVQSILNDSFDERAETLHCAL SCQSEKQDDTEFSRSESSEYIFMTEEDRNLRGSWIGEPKECFTLDLATSSIYRRRKNM IFFW" gene 212052..213095 /locus_tag="R008_G10701" mRNA 212052..213095 /locus_tag="R008_G10701" /product="hypothetical protein" CDS 212052..213095 /locus_tag="R008_G10701" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86234.1" /translation="MTTDTTVFVSGATGFIALHIVNDLLKAGYTVIGSGRSQEKNDGL LKKFNNNPKLSMEIVEDIAAPNAFDEVFKKHGKEIKIVLHTASPFHFETTNFEKDLLT PAVNGTKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEESWNKDTWDS CQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGPQMFADSLKHGIN TSSGIVSELIHSKVGGEFYNYCGPFIDVRDVSKAHLVAIEKPECTGQRLVLSEGLFCC QEIVDILNEEFPQLKGKIATGEPATGPSFLEKNSCKFDNSKTKKLLGFQFYNLKDCIV DTAAQMSEVQNEA" gene 213462..216713 /gene="Ams1" /locus_tag="R008_G10706" mRNA 213462..216713 /gene="Ams1" /locus_tag="R008_G10706" /product="Ams1p" CDS 213462..216713 /gene="Ams1" /locus_tag="R008_G10706" /note="Similar to YGL156W 'Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation; delivered to the vacuole in a novel pathway separate from the secretory pathway'" /codon_start=1 /product="Ams1p" /protein_id="EWG86235.1" /translation="MSSEDIIYDPQFKPVQGIYENRLRQFIDTGGDYHDLNLPKFYDK KRISLDHDHVKVWWYQVSFERGSSPVSPDKRPSWKSIIERDKKGELEFREANINQPFG PSWSTTWFKVKISLPEDWVKSDEQLLFQWDCSNEGIVIDPKTLIPVTAFSGGERTEYV LPKTSDGKHFFYIEAGNNGMFGCGAGSTINPPDDNRFFHLRKADIVWPDLDARALYID FWMLGDAARELPGDSWQKHQARQLGNAVMNLFDPNDRSSVRKCRELLQREYFDSFLES SKVYEQGESQVLTNVYGIGNCHIDTAWLWPFAETRRKIVRSWSSQCTLMDRFPEYKFV ASQAQQFKWLLEDHPEFFNKVLIPKIQQSQFFAVGGTWVENDTNIPSGESLARQFFFG QRFFLKHFGLKSKIFWLPDTFGYSSQMPQLCRLSGIDKFLTQKLSWNNINSFPHSTFN WAGIDGSQLLTHMPPGNTYTADSHFGDVLRTAKQNKTPECYGSGLMLYGKGDGGGGPT EEMLQKMRRIRSMNNRNGNVIPKLQVGITVDEFYDDILKRTNQGHDLPTWSGELYFEF HRGTYTSQAQTKKLMRLSEIKLHDLEWIAAKTSVLYPDSYKYPSKQINELWENVLLCQ FHDVLPGSCIEMVYKYEAVPMLHNVVKECTSLIDKTVQFLQSQSKADLVEMRTLTWSK PEKVSEECSLNGSYTSSVTGYDDYIVLANGKLKVIICKKTGVITSVTDETLGVEYLDT EHGRNKLGANQFVIFDDKPLGWQAWDTELYSVNQYKYVTKPKKVQVSCNTKEKCAVEV IFQISEKCKIKSVISLNATAVTDAKLSKVDISTTVENWDARNKFLKVEFPVNIRNDFA SYETQFGITKRPTHYNTSWDVAKFEVCHHKFADYSEYSKGVSILNNCKYGFSTHGNLM RLSLLRSPKAPDAHADMGTHEIKYAIYPHRGALSSDTVKLAHEFNYCFKYKLPKDIGM NFDDIISISGDENVILSNIKRGEDDSAVKSNYSLNPRDEQSIVVRVYESLGGESFASL NTTLNLKRIEKVDNLEMKVYKSLTATRDESNHAINRIPIKLRPFEIASFRLYF" gene 217126..218256 /gene="Cdc43" /locus_tag="R008_G10716" mRNA 217126..218256 /gene="Cdc43" /locus_tag="R008_G10716" /product="Cdc43p" CDS 217126..218256 /gene="Cdc43" /locus_tag="R008_G10716" /note="Similar to YGL155W 'Beta subunit of geranylgeranyltransferase type I, catalyzes geranylgeranylation to the cysteine residue in proteins containing a C-terminal CaaX sequence ending in Leu or Phe; has substrates important for morphogenesis'" /codon_start=1 /product="Cdc43p" /protein_id="EWG86236.1" /translation="MCQATNGPSRVVTKKHRKFFERHLQLLPSSHQGHDVNRMAIIFY SISGLSIFDVNVSAKYGDHLGWMRKHYIKTVLDDTENTAISGFVGSLVMNIPHATTIN LPNTLFALLSMIMLRDYEYFETILDKRSLARFVSKCQRPDRGSFVSCLDYKTNCGSSV DSDDLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYNGAFGAHNEPHSG YTSCALSTLALLSSLEKLSDKFKEDTITWLLHRQVSSHGCMKFESELNASYDQSDDGG FQGRENKFADTCYAFWCLNSLHLLTKDWKMLCQTELVTNYLLDRTQKTLTGGFSKNDE EDADLYHSCLGSAALALIEGKFNGELCIPQEIFNDFSKRCCF" gene complement(218322..219140) /gene="Lys5" /locus_tag="R008_G10721" mRNA complement(218322..219140) /gene="Lys5" /locus_tag="R008_G10721" /product="Lys5p" CDS complement(218322..219140) /gene="Lys5" /locus_tag="R008_G10721" /note="Similar to YGL154C 'Phosphopantetheinyl transferase involved in lysine biosynthesis; converts inactive apo-form of Lys2p (alpha-aminoadipate reductase) into catalytically active holo-form by posttranslational addition of phosphopantetheine'" /codon_start=1 /product="Lys5p" /protein_id="EWG86237.1" /translation="MVKTIEVVSEVSKVAGVRPWAGIFVVEIQEDILADEFTFEALMR TLPLASQARILNKKSFHDKCSSLCNQLLQLFGCSIVTGLNFQELKFDKGSFGKPLLDN NRFLPFSMTIGEQYVAMFLVKCVSTDEYQDVGIDIASPCNYGGREELELFKEVFSERE FNGLLKASDPCTIFTYLWSLKESYTKFTGTGLNTDLSLIDFGAISFFPAEGASMCITL DEVPLIFHSQWFNNEIVTICMPKSISDKINTNRPKLYNISLSTLIDYFIENDGL" gene 219317..220342 /gene="Pex14" /locus_tag="R008_G10726" mRNA 219317..220342 /gene="Pex14" /locus_tag="R008_G10726" /product="Pex14p" CDS 219317..220342 /gene="Pex14" /locus_tag="R008_G10726" /note="Similar to YGL153W 'Peroxisomal membrane peroxin that is a central component of the peroxisomal protein import machinery; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p), peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p'" /codon_start=1 /product="Pex14p" /protein_id="EWG86238.1" /translation="MSDVVSKDRKALFDSAVSFLKDESIKDAPLLKKIEFLKSKGLTE KEIEIAMKEPKKDGIVGDEVSKKIGSTENRASQDMYLYEAMPPTLPHRDWKDYFVMAT ATAGLLYGAYEVTRRYVIPNILPEAKSKLEGDKKEIDDQFSKIDTVLNAIEAEQAEFR KKESETLKELSDTIAELKQALVQTTRSREKIEDEFRIVKLEVVNMQNTIDKFVSDNDG MQELNNIQKEMESLKSLMNNRMESGNAQDNRLFSISPNGIPGIDTIPSASEILAKMGM QEESDKEKENGSDANKDDNAVPAWKKAREQTIDSNASIPEWQKNTAANEISVPDWQNG QVEDSIP" gene 220565..223963 /gene="Nut1" /locus_tag="R008_G10736" mRNA 220565..223963 /gene="Nut1" /locus_tag="R008_G10736" /product="Nut1p" CDS 220565..223963 /gene="Nut1" /locus_tag="R008_G10736" /note="Similar to YGL151W Component of the RNA polymerase II mediator complex, which is required for transcriptional activation and also has a role in basal transcription" /codon_start=1 /product="Nut1p" /protein_id="EWG86239.1" /translation="MEKESVYNLALKCAERQLTSMEFSNLYKEFFNEKFPSLIQEEEE DTTTTANINEVKKASDLVDTPSNNTAATADTTHLHEALDIFCSDFVKILNLEKPLILA DYIVEVLLVNYNSDMIKCFLPKLNSVRNSLLLAHFFSKSCSFFAKLSDTLIIDQVRKD LGNVIVPNILSLDMNSMNKELIAIVSKLLQTTLKLSPSPILLTSASCKNGSFTLLNQL SQTNKLLFKRVSQTFEEKLHFKDTKPFLNKDSTNEFVGSPSLTSPQYIPSPLSSTKPP GSVNSAAKYKDMKLLRYYKNIWLNNKIINWEISNPDFLSKYSAITSSIFQESFNSVQN LDQLLTDLIETSFTCFAQFVSNKQYHQANSNLTLLERKWVIFITKHLPLLILENSSRS PRVVTNALDNIDEKVVKAIRIYFTEKDDNKTNNEDLFDDYPSTSLDIRHDFIKGLIML NLQPASVINNYLREDQMIDTSILPTSDDLVVRNLQGIQEVVHNTNSFIISSLDTLELE SITESITHDSSNGLFQVLHNFESVAPTKQREIVKAFLSIFEDAIKELNYNRIAKICAL LFFNFSHSLTTILSFSSPAALMKTLIKFVDLSRNGRNGSNGNDESSEYETINISLSFS WAILLIINLTQTYGISVVDVALKYPELSIKNSFIINFISNLPNVSDKYYLEESNVNDS DMLTKSHNTVQSWLCDLFVNGSITDQLIQNIETRQLANLIPFIVKQVLLSVEIGVLTD ISSLIGGFEYFLQPLLLVGLIKTFYWLEQFLSCVKNDTISEDILQGIFNLLNTLFNPV TLNEDSKAFHTAVLRLNAIPLLKVLRKFRVQSQSNYGIYSSDAQGDPNLEPLIAKLVA VLNVSPVYDVDPRIINSENDYSRKQLGYGKFLILNENPINKIMTNQINSFWSLHSSTY YNLDYLFELIELVTPKSFLFDVLKTLEYKLATYGVPGSENKRGSLDSEHVFDYFFYFL VLYDVKTAEEASQLIEYMENDAKKSKGDVDIKGEDLHEKNDSAEVRQETQPKAEATQD DDFDMLFGENDTSTQAYEEEEENEDNDGNNRTNNVPMIKAEETPSKTNKISILKRHSF AVLLHERKLLNDLALENGEITKTENEKFISYHDKYLCMLKTCVF" gene complement(224145..228614) /gene="Ino80" /locus_tag="R008_G10741" mRNA complement(224145..228614) /gene="Ino80" /locus_tag="R008_G10741" /product="Ino80p" CDS complement(224145..228614) /gene="Ino80" /locus_tag="R008_G10741" /note="Similar to YGL150C 'ATPase and nucleosome spacing factor, subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro; has a role in modulating stress gene transcription'" /codon_start=1 /product="Ino80p" /protein_id="EWG86240.1" /translation="MSLAVLLNKEDKDISDFSKTTAGKSAKKNSRERVADVAPTRVLD KKQAYLSQLNSEFNRIKRRDSIEQLYQDWKFINLQEFELISEWNQQSKDWQFDNTNDS QDLHFKKLYRDMSMINKEWAEYQSFKNANLSDIINEKDADEDEEDDEDELEDGEEDME EDEASTGRHTNGKSMRGNGIQKSRKKDAAAAAAIGKAIKDDQTHADTVVTVNGDENED GNNGEDEDNDNDNENNNDNDNDNENENDNDSDNDDEEENGEEDEEEEEIEDLDEEDFA AFEEQDDNDDEDFNPDVEKRRKRSSSSSSSTKLSMNSLSLITSKKINKNITINSDRPK IVRELIKMCNKNKHQKIKKRRFTNCIVTDYNPIDSKLNIKITLKQYHVKRLKKLINDA KREREREEALKNNVGLDGNDLDNDEDGSESHKRRKLNNNTANGADDANKRKFNTRHGL PTYGMKMNAKEARAIQRHYDNTYTTIWKDMARKDSTKMSRLVQQIQSIRSTNFRKTSS LCAREAKKWQSKNFKQIKDFQTRARRGIREMSNFWKKNEREERDLKKKIEKEAMEQAK KEEEEKESKRQAKKLNFLLTQTELYSHFIGRKIKTNELEGNNVSSNDSESQKNIDISA LAPNKNDFHAIDFDNENDEQLRLRAAENASNALAETRAKAKQFDDHANAHEEEEEEDE LNFQNPTSLGEITIEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQ SISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRK FWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKN LLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANT KLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQIS TNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFTT FGKTTSMLTASVANNNSSVISNSNMNLSSMSSNNISNGKFTDLIYSSRNPIKYSLPRL IYEDLILPNYNNDVDIANKLKNVKFNIFNPSTNYELCLFLSKLTGEPSLNEFFRVSTT PLLKRVIERTNGPKNTDSLSFKTITQELLEVTRNAPSEGVMASLLNVEKHAYEREYLN CIQRGYHPNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKKG IPVEDFPKTGLFPEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLI YFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGG LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRA KQKEQVQQVVMEGKTQEKNIKTIEVGENDSEVTREGSKSISQDGIKEAASALA" gene 229440..230570 /gene="Aro2" /locus_tag="R008_G10751" mRNA 229440..230570 /gene="Aro2" /locus_tag="R008_G10751" /product="Aro2p" CDS 229440..230570 /gene="Aro2" /locus_tag="R008_G10751" /note="Similar to YGL148W Bifunctional chorismate synthase and flavin reductase, catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids" /codon_start=1 /product="Aro2p" /protein_id="EWG86241.1" /translation="MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLT RRRPGQSKLSTPRDEKDRVEIQSGTEFGKTLGTPIAMMIKNEDQRPHDYSDMDKFPRP SHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGV VTCVVRNLPTGLGEPCFDKLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFY FEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQKTATYDGEEGILAA KGRHDPAVTPRAIPIVEAMTALVLADALLIQKARDFSRSVVH" gene complement(230795..231370) /gene="Rpl9a" /locus_tag="R008_G10756" mRNA complement(230795..231370) /gene="Rpl9a" /locus_tag="R008_G10756" /product="Rpl9ap" CDS complement(230795..231370) /gene="Rpl9a" /locus_tag="R008_G10756" /note="Similar to YGL147C Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Bp and has similarity to E. coli L6 and rat L9 ribosomal proteins" /codon_start=1 /product="Rpl9ap" /protein_id="EWG86242.1" /translation="MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVT FTKVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVN IVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAAD LQQICRVRNKDIRKFLDGIYVSHKGFITEDL" gene complement(231792..232727) /locus_tag="R008_G10761" mRNA complement(231792..232727) /locus_tag="R008_G10761" /product="hypothetical protein" CDS complement(231792..232727) /locus_tag="R008_G10761" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86243.1" /translation="MEKASLNIAQTKEIPLTDRRMGLRGWKACSRPHLLGRILLFMSI LFITSAELSSDVSSREVYMPIFNNKLSFKVPPIKRSLLLGAALYEDFEYSSNNSASDG AFCTVFNAGMNDASREVVFEIHVMDVLQEETDSSRFGGTSHERGRQSLGFSVFNNKNG DLLRSKKNLASGTSVIEVNPGNCNEFLICFINLVYDGSWSSIDTEKSVTIKMTYNDKL DPDMLLHLVNQMTPQVVKALNTVSDGLFQIVSDTTLLQMESDRRDINEATYSYLIVGF VSLMVAQLISNIIVTTYLIIKIKSNPSSHIKKKGL" gene 233284..235389 /gene="Tip20" /locus_tag="R008_G10766" mRNA 233284..235389 /gene="Tip20" /locus_tag="R008_G10766" /product="Tip20p" CDS 233284..235389 /gene="Tip20" /locus_tag="R008_G10766" /note="Similar to YGL145W 'Peripheral membrane protein required for fusion of COPI vesicles with the ER; prohibits back-fusion of COPII vesicles with the ER; forms a tethering complex with Sec39p and Dsl1p that interacts with ER SNAREs Sec20p and Use1p'" /codon_start=1 /product="Tip20p" /protein_id="EWG86244.1" /translation="MNGIDDLLNINDRIKQVQNERNELASKLQNLKQSLASNDTEVAL SEVIAQDIIEVGASVEGLEQLRAKYGDLQILNKLEKVAVQQTQMQAGVDKLDSFERQL DELAEQPPDQFTLDDLKALHSKLTSVFATVPQINNIDSQYAAYNKLKSKVTGKYNDVI IQRLATNWSNTFDQKLLEAQWDTQKFASTSVGLVKCLRENSTKLYQLSLLYLPLEEET QNGDSERPLSRSNNNQEPVLWNFKSLANNFNVRFTYHFHATSSSSKIETYFQFLNDYL TENLYKCINIFHDDCNGLTKPVIHEQFINYVLQPIRDKVRSTLFQNDLKTLIVLISQI LATDKNLLNSFHYHGLGLVSLISDEVWEKWINYEVEMANRQFINITKNPEDFPKSSQN FVKLINKIYDYLEPFYDLDFDLLVRYKLMTCSLIFMNLTSSYLDYILTVDSLNETRTK EQELYQTMAKLQHVNFVYRKIKSLSSNFIFIQLTDIVNSTESKKYNSLFQNVENDYEK AMSTDMQNSIVHRIQKLLKETLRNYFKISTWSTLEMSVDENIGPSSVPSAELVNSINV LRRLINKLDSMDIPLAISLKVKNELLNVIVNYFTESILKLNKFNQNGLNQFLHDFKSL SSILSSPSHATNYKCMSLHELVKILKLKYDPNNQQFLNPEYIKTGNFTSLKEAYSIKY LKDTKIQDALYRIIYGNIL" gene complement(235491..237548) /gene="Rog1" /locus_tag="R008_G10771" mRNA complement(235491..237548) /gene="Rog1" /locus_tag="R008_G10771" /product="Rog1p" CDS complement(235491..237548) /gene="Rog1" /locus_tag="R008_G10771" /note="Similar to YGL144C Protein with putative serine active lipase domain" /codon_start=1 /product="Rog1p" /protein_id="EWG86245.1" /translation="MSLTPTNEILFHYKSSVKVGELERYVITYHLYDGEEIPPDLNLN SLWLKVRNMNPLSYRAAYLMGPFMLYCDVKTAQYHHSQKIVASVDYPKFEPNVQTQQD FVAELSVHNIRQKYVWIADVMSQILFTTNTNVTYEVTIGTSKESVENPHDLPSHLGSY SPKLTVNRLTTLDLWNLPVQITTPQKKKHLVVLTHGLHSNVSTDLVYIMEQIYKAQKN YPHEQIVVKGYRGNVCQTEKGVKYLGTRLAEYIIQDLYDESIRKISFVGHSLGGLIQA FAIAYIYEVYPWFFKKVNPINFITLASPLLGIVTDNPAYIKVLLSFGVIGKTGQDLGL ENDVEVGKPLLYLLSGLPLIEILRRFKRRTVYANAINDGIVPLYTASLLFLDYNDILE QLQKLKENSKKSPLINDASTPVNQDFFNKTFISPLTKMLSILAPQKFPTENGSEIPKV SFFESASSILLPPLPERAYIMDPDSRDPVIIHDKIYNEDDIPQSEFDIEDGFFDKKNI LLQAFFAGKKERAKYRNLEETIARRWHEGMAWRKVVVALKPDAHNNIIVRRKFANAYG WPVIDHLIDVHFNGDDDDDNDENDDINSTQVVEPIQSVTEGKKKYRKAENIPQEYGWL NKVETNGVFDEGPTGMISTVGEIVEALAKRGFSAVIDRRNASEDPNDEVLRFEEMNSD LVQ" gene complement(237758..238999) /gene="Mrf1" /locus_tag="R008_G10776" mRNA complement(237758..238999) /gene="Mrf1" /locus_tag="R008_G10776" /product="Mrf1p" CDS complement(237758..238999) /gene="Mrf1" /locus_tag="R008_G10776" /note="Similar to YGL143C 'Mitochondrial translation release factor, involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability'" /codon_start=1 /product="Mrf1p" /protein_id="EWG86246.1" /translation="MWLSKFQFPSRSIFKGVFLGHKLPLLVRLTSTTTNSKSNGSIPT QYTELSPLLVKQAEKYEAELKDLDKDLSCGIHFDVNKQKHYAKLSALTDTFIEYKEKL NELKSLQEMIVSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELR PGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYD RLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKE RLEKEEKERKARKSQVSSTNRSDKIRTYNFPQNRITDHRCGFTLLDLPGVLSGERLDE VIEAMSKYDSTERAKELLESN" gene complement(239310..241160) /gene="Gpi10" /locus_tag="R008_G10781" mRNA complement(239310..241160) /gene="Gpi10" /locus_tag="R008_G10781" /product="Gpi10p" CDS complement(239310..241160) /gene="Gpi10" /locus_tag="R008_G10781" /note="Similar to YGL142C 'Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis; putative alpha 1,2 mannosyltransferase required for addition of the third mannose onto the GPI core structure; human PIG-Bp is a functional homolog'" /codon_start=1 /product="Gpi10p" /protein_id="EWG86247.1" /translation="MAHEVHRIKPKLGRTQIFWVFLAFRVLNAVLTRTFFQADEFWQA LEPAHWKAFKYGELTWEWKFGVRSYLFPMIFELTYRLVSLSSILLHYALLLLSTIGSD LLILLLPKYELSWQVAEDLKRLPFDVTRSFEYYGVIYAPKIVMAVLASIGEYYIVRFV QKLYLLTLDKRNEKEEEERRSGLSEITKFALLLSLTNFFNCFFITRTFINSFEMILTS IALYYWDWTGGQMIKESSFTKSLIFAFLACLQRPSSGLIWVIPSISLILNLVGKKQYH LLFITFSKVLRSFFLVFTANAIIDMYFYEKVTFPFFRFLKFNFTTPLSKFYGVAPWHF HFFQSLPIVLGASIPAFAFGLFFPLSKRSFPKKYLNPFFQVKLTILLNLLVYSTLPHK EFRFIFPLQPLFILISSFGLLRLDRDYWKRLSGLKSLLWLVPFVSVFIALLLDTFHES GSIEVMKFLHEEPEIDSLGFIMPCHSTPGQSYLHRSDIQDLWSITCNPPLHLLGDPEA YSKLETYMDESDHLYDDISAFIYKNFPPPFRKDLRSPGKTYSHEWPTYLVVFEHMENA FLKDFLKDSSYIEYNRFFNSLAHWDSRRSGDIIIYYKLPFDYSDIPAADI" gene 241394..244126 /gene="Hul5" /locus_tag="R008_G10786" mRNA 241394..244126 /gene="Hul5" /locus_tag="R008_G10786" /product="Hul5p" CDS 241394..244126 /gene="Hul5" /locus_tag="R008_G10786" /note="Similar to YGL141W 'Multiubiquitin chain assembly factor (E4); proteasome processivity factor that elongates polyUb chains on substrates, opposing Ubp6p, a branched polyubiquitin protease; required for retrograde transport of misfolded proteins during ERAD'" /codon_start=1 /product="Hul5p" /protein_id="EWG86248.1" /translation="MLNFTGQTRRRNVNLGNRTRNSKKDLLEKAKRERERRAQDKLKE DASKTIQKSIRRHFSNVRLFKNTFTSSQLVHMIPAYGGKLIYYISQYDLQQLLKLSHN FLSSYPNSLGNRQLLSLLKLYQDDALVAETLSDLNMDCPTVDEFLDSLSVYLCRASFL SYSSASKLADVIEAWEVMHSSASISIFSISIGSYEKRPFALQFYCILAERNLLPQLIN TNPILWDNMAKTYSHCSKGGQKNIAKLLIPNFNNHIAPSVLRSDNDYVLKFYEKAFID EVIATTANYVSDEDHVKNLMCYIASSPNQSCKNSVLITLLSNKDFVRRLSWEFFHTKF NASKTEAHPLFSVLAQLIDMHLLISTDRELLDYNSVIPIEELKKFTSTLKDFTFRQYW ELPKSERNPMLKEAVPLLSKVYERDSRLHFLSTENNPTYWENSEKQFLNLRFYEELQE YEDLYREHLEEESDEDMEKEIDLDKERPPLKSLLLNKMKKRLKSSLRFRKLEILLELP FFIPFEERVDLFYMFIALDKKRLSLDDDHNLINMFTPWASTGMRKQSAIISRDNVLED AFNAFNSIGERFKASLDVTFINEFGEEAGIDGGGITKEFLTTVSDEGFKDPKHELFRT NDRYELYPSVVYDATKLKYIWFLGKVVGKCLYEHVLIDVSFADFFLKKLLNYSNGFLS SFSDLGSYDSVLYNNLIKLLNMTTDEIKSLDLTFEIDEPESSAKVVDLIPNGSKTYVT KDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISGERDN IDLDDLKSNTEYGGYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKAL DPKFGIRNAGTEKYRLPTASTCVNLLKLPDYRNKTILREKLLYAINSGARFDLS" gene complement(244394..248053) /locus_tag="R008_G10791" mRNA complement(244394..248053) /locus_tag="R008_G10791" /product="hypothetical protein" CDS complement(244394..248053) /locus_tag="R008_G10791" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86249.1" /translation="MSLKSKLTKIQKLWLYYFPCDRILAKRICKSTVNTTVAFIFCLI PKITAHLGAAPAMLPMISVIVHPGRRVGGTIHGAIYCITGLIFGLAYAIFGRFLAQRC LGSSWHELTEAQQHVLHYKRYEAGLAILAVFEVIMLFFHGWMRSVSHYYFGIVFPLFV VVHFAFMDPLNETAGTIAKAYSTPFYLGIAMSIFWNLVLFPEWGTTYLGNTTIDAMNE LHKSIDYSINFFIAVDPHNSSQLYSRDPVSLGKLLKMKSLISSKVNNCRVVLHECIYE FTYAYVSPTKLKPIISTLENLTVFINGLVNTCQLEFILLARHDNKLRPDDVAALTLPK NKEISFANAEKLLKVIDKLHPVIYSLHRTMSECMYIAKLVLAHAFDVKVSRVHSCSMF KDGNFPTFSNNANNLPNDVDIQNKINDLKQALEECKAKFKSEMLSFDIDIMSPSDEMF LLSSFLLNFRQTADSTLVIMESVKDILVKRQIQEKKGWLRGKRLWFLVLTNYETFSIW LKGDRNSVTENDTLKGTFNGNTNGFAHDTVIRRPDYEENELLSQKVSSNKNIVKDDAS LDLPMTSEPKGNSSSTSDTSSSPLTLTKTTTFGTNRTSRRQGRFSFMSMLISIDKFCE VSHPHFRFGFQVAIALMLASFPMFIPKTRQWYIDYRGTWIGFVCILCLEPSVGGTFWV FFLRAVGVIFGAAWGYLSYVAAVNQTNPYLETVITVFGAIPGFYYLLGTPYVKAAIIE IISIYIVMLAAILPSQDDILTSFAKRCLAVGYGGGVALIVQVFFFPLKAREQLNEEIS FVCGCISEMELLYATGLEGEQVASSMSEEKYKKIEKISKSAKEALARATAYKGLTRQE PRLKGEYTELENVFTQVIFIQKQIIERIDTISLLRKQNGSAVIEEFNSVVYPYRRQMV GSISCLMRALQEAFINKTPLPQFLPSARIAHRRLINKVRQTLRIRYPGQISNLSDKAR KPNEGDYADGKDEDDDDNEGLVMKMNRRGQANTTANPHEYVLKEKFLSWNASSAASEE IIEYIEELLNLTKILVGVNEFKYGFLSRPLYEDWAAEAVTGFDNFINGKSNPMNTRRN RTPFDGTSIISEGNESLQSTNSNESQISPDSTRSYEPECPVAYEKNDNPAALNLLRIA SHKAGQNADGLPKTFRNRAFSIASTSGQLSSLSRHSTLGNADPNYLNDDDESSDDDLP LALKMVLSHMKEKKD" gene 248757..251165 /gene="Flc3" /locus_tag="R008_G10796" mRNA 248757..251165 /gene="Flc3" /locus_tag="R008_G10796" /product="Flc3p" CDS 248757..251165 /gene="Flc3" /locus_tag="R008_G10796" /note="Similar to YGL139W 'Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER'" /codon_start=1 /product="Flc3p" /protein_id="EWG86250.1" /translation="MRFLQVYKSSALIGLIILLASKVNLAEAKRKLVATSLVTCMENS QLSANSFDVVFNPDDRSLHYDLDMSTQIDSYIFADIDVYAYGFKIITKNVDLCSINWK QFCPVHPGNIQIDSIEYISSEYVNEIPGIAYQVPDIDAYARVKITNNVSEYLACIQIY FSNGKTVSQIGVKWATAVVAGIGLLLSAILSTFGNSTAASHISANTMSLFLYFQSVVV VAMQHVHRVPPIAAAWAENLVWSMGLIRISFMQRIFRWYVQSTGGTPSLYLTSTSMSV LAQRSWQYLMELPLIKRATNVLYGNANTLIFRGIKRLGYKMGIENTSIVCTGFTFFVL CGYVLAGFIIVFKCCVELATRLGWIQKARFWEFRKQWRMILKGALLRYIYIGFVQLTI LSFWEFTERDSPAVIVIACLFILLSCGLMLWAAWRTVFFARRSVALYNNPAALLYGDE YVLHKYGFFYTMFNANHYWWNIVLLSYIFVKSLLVGFAQASGQTQVLFMFILDLFYFV AIIYYKPYLDRPTNIMNILIATVTVVNSFLFMFFSDLFNQSYKVAAIMGWIFFIMNAA FSFILLMMILAFAGMMLFSKNPDLRFKPAKDDRTSFQRNTMKPEGTVNRSVANELLAL GNVAKDHDDNSDYESNDTGVNDELKQAQDETTPTTVTSSDDNKPTFSEKILSKFSRPK NENASTDALRVEAPKQQTFPHNLTNLSRENLSTLGSKPYPGHTRSQSDAHNGLINSFE EEDTSSNTDPFHDSTEGDLLDTSSSDGGFRSQNYVRDDSINSLGNNKQPLRKPPGFFD EGFM" gene complement(251534..252571) /locus_tag="R008_G10801" mRNA complement(251534..252571) /locus_tag="R008_G10801" /product="hypothetical protein" CDS complement(251534..252571) /locus_tag="R008_G10801" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86251.1" /translation="MYNFLEFFFFFITYTLFKSTFVQGKSSFPGHDVCKFEDQNFQTE FFLNVLKGDKLQNLKQEYEQYKKQSTLYTGFVIEKQYEYQVAPLQINNFLQVTFCKGG KPIWNHILPFQKDLDWAEPLCIPAQEDDTISQNSSVCFKFARVQKYTQRNVTLYFPNK FVGFVFVCNSSKTHPPTQNNFETIPLTPIISDDIRDYKISWSIKGRITKVVSYLHTLS IPMSKYEMLIHSDKNISNELEYKSLTSEFWKSYKNLRKFKNKEMSWINEINPMEQYDS SGNENVPNFHEKLDRTINRIAQNIERPHDALIRAIAAHNRNSNSGNITRRKYLRRKIS KMLKNKIPLKN" gene 252909..255778 /gene="Sec27" /locus_tag="R008_G10806" mRNA join(252909..252926,253127..255778) /gene="Sec27" /locus_tag="R008_G10806" /product="Sec27p" CDS join(252909..252926,253127..255778) /gene="Sec27" /locus_tag="R008_G10806" /note="Similar to YGL137W 'Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport; contains WD40 domains that mediate cargo selective interactions'" /codon_start=1 /product="Sec27p" /protein_id="EWG86252.1" /translation="MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRS IAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCI ATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIR GNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAF GKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSD GFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASGYTLLFNKDAYL EAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVGGKTYNL AHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLP NVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEM KWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAERAGKFN LAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDDAVNDIVTKWKENLILNGK NTVSERVCGAEGLPGSSSSGDAQPLIDLDSTPAPEQADENKEAEVEDSEFKESNSEAV EAEKKEEEAPQQQQSEQQPEQGEAVPEPVEEES" gene complement(255937..256899) /gene="Mrm2" /locus_tag="R008_G10811" mRNA complement(255937..256899) /gene="Mrm2" /locus_tag="R008_G10811" /product="Mrm2p" CDS complement(255937..256899) /gene="Mrm2" /locus_tag="R008_G10811" /note="Similar to YGL136C 'Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA; MRM2 deletion confers thermosensitive respiration and loss of mitochondrial DNA; has similarity to Spb1p and Trm7p, and to E. coli FtsJ/RrmJ'" /codon_start=1 /product="Mrm2p" /protein_id="EWG86253.1" /translation="MILVYNRIRSIISSSLGRIHVRYNSNSQNRWLNRQLKDPYTKEA KVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRILDLGYAPGAWSQVARQRSSPNSMILG VDILPCEPPHGVNSIQANILAKRTHDLIRLFFSKHFQLNRHDDLHKDHGYFQNMLEEE LTHVKDTELYREIFTSDDIYETPNTNSTLIEREKFPVDVIISDMYEPWPQTTGFWNNI TNQAYFRMANTSGVSIRDHYQSIDLCDAALVTAIDLLRPLGSFVCKLYTGEEENLFKK RMQAVFTNVHKFKPDASRDESKETYYIGLKKKRNVDKLDVFSNS" assembly_gap 257705..258184 /estimated_length=480 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 258724..260025 /gene="Pcl10" /locus_tag="R008_G10816" mRNA 258724..260025 /gene="Pcl10" /locus_tag="R008_G10816" /product="Pcl10p" CDS 258724..260025 /gene="Pcl10" /locus_tag="R008_G10816" /note="Similar to YGL134W 'Pho85p cyclin; recruits, activates, and targets Pho85p cyclin-dependent protein kinase to its substrate'" /codon_start=1 /product="Pcl10p" /protein_id="EWG86254.1" /translation="MDMTKNHTTDTEEFDDGDIRPVSLGIVDDYNTSFELPLKPRFLQ SENFSDLTSEWDQSRSNTPGLAEGKTEKAQPCGTTDSSKNRIHVEQLLESANEMNNYL AQNIENINNFQVGLLNGGKGLYSSMGDDSSACINGTNFSSTSNFELSDDELEDTTGCT SSIFDKDLFHQQNGLSIPRRRSPLFKSPTASFEIGDATDVEEQDIDDSIFSECSSITS FDMGGLHISLPHDEEEDQEKTKSESENPLLHGIPVDVEVPHISVDEALANFKETIELL LKLSGNRKCTGFNTRVEKKEYSNFYMKSKPTLSSADFLKRIQDKCEYQPTVYLVATFL IDTLFLTRDGNNILQLKLNLQEKEVHRMIIAAVRLSTKLLEDFVHSHEYFSKVCGTSK RLLTKLEVSLLICVCNTKLMVSNRKLAASKLLLNELRSFCV" gene 260768..264562 /gene="Itc1" /locus_tag="R008_G10821" mRNA 260768..264562 /gene="Itc1" /locus_tag="R008_G10821" /product="Itc1p" CDS 260768..264562 /gene="Itc1" /locus_tag="R008_G10821" /note="Similar to YGL133W 'Subunit of the ATP-dependent Isw2p-Itc1p chromatin remodeling complex, required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1; similar to mammalian Acf1p, the regulatory subunit of the mammalian ATP-utilizing chromatin assembly and modifying factor (ACF) complex'" /codon_start=1 /product="Itc1p" /protein_id="EWG86255.1" /translation="MVLYKRKPILLPDPKPLPLDLNVQVWHIEETGEWFSSYEEFLER FDFYTRHHFTCEITGTSCLTFFQALDSEETQFKYVEDRFPLKLREPVARFLHFNGIRR LDALVEKVYARFKNDFFPGEVVYLRKQKDSSTTSSNSQQSTPQPDDMVEINSVGNPGL PQYQYQRRYVIKEKVQFNATINPESREIVMPAHTKYMLIEEAASSNKSFIVDQGQIYR DRSTFTKHLIKCFFKITLQRASSKMGAPWCVKPEYLAMYGLTMEWPKDMLKYKEDEPV VARRSNSANVSSPESEKNKRQSKSSGKSNTSNDASNKKETKKKRKPTEVNDSENNSSE EDKKKGQNVTSETHSKKRKKEANEEPNTENVESVPTPANAEPQAVTITSIMDDLALPY QHPPNIFPNLTYYNEKLECISLGSTKLSRPFDSFGKLLQAYQFLNTFGSKICLSHFSL DQFITSLKCTDPYELKGEVVLVNIRTQTSKEQEIENNGLPIKNKAETTTEEDSENPSD WQRNSFIRDMIMKRNSDKVEYKIVHDDPASDDILDNINHNGSALLIEVFTALLRLFIN EEGDWSCIVVENWIIDDKGVLMERKDERGEGEAKQKRNAHGYFLQDKEKIDNLKDTLK ENATEVQKESDAKNETNSESDSKSDSDSKERDPKLEKCLNYRNVNWIERLTKRQFNNS YWLIILLGVLEDCRHLPMYTEFIDSFIEKIIPKDISATQLPKQLWRNFCRKLSFSDKV NALWILVDLVSHFSPDIKAAVDDSMELCGQIRSERFKVARELKTEAAVLSNLQGDLQA IQEKLNKTDENTPSADGADKKDDSESNSEPIDLIIIEKKQKLIEEQDKKVQALQSDKN FLDNCLFENDLQRLKPLGLDRYGNRYFWLDHNGVPFPQYPAGMNETPKSNNSLSYHSG RLLIQGPKASSAKFFLNVSDEQLSNWQKIRNSEGISEATREVFGISKTSSGSYNYVEN GIEVELLDSNDRVNPLIELTPIQKKIMDETPSRLLLSPDQWYCIDKLEDLSRIMDWLD NWGRKEHDLLRQIRPIMERIKSSLSLRDHALSLTAFTKNEEKLLKELENNEFTENELN VDSMDVDDKNSGVKSEVDVQVDAEEKREAVIDEKLEVIADELMKLDDSSKTRNVLNRI QELEDQRDELLEQKKSIINSQRPGARILARSERKRTKISRGNKVNKQIEILTDLVNYR HFKAMEDVIAWKNVLANSIWGSSLRKNASGNKRSGVIETVDDKLKDIVGQTSRTVTPA PN" gene complement(264709..268920) /gene="Snt2" /locus_tag="R008_G10831" mRNA complement(264709..268920) /gene="Snt2" /locus_tag="R008_G10831" /product="Snt2p" CDS complement(264709..268920) /gene="Snt2" /locus_tag="R008_G10831" /note="Similar to YGL131C 'DNA binding protein with similarity to the S. pombe Snt2 protein; computational analysis suggests a role in regulation of expression of genes encoding amine transporters'" /codon_start=1 /product="Snt2p" /protein_id="EWG86256.1" /translation="MPKEEDFQLPRRREAAKNVNYNEMEIDTKLVQQIQIAEKSGAKT KGSNSQTPRNCKRTSNPASRNEKFKYQKFLHDKNTCWNFIPTLPPSFRKNSRFSNILD LDDAMIDLKKMSLFNTESVLLSANDTIYMISEPAGEPYYVGRVVNFVSKPEFSNTIHE AIKTTSVFPAKFFQVRMNWFYRPRDIQEHVNTFNPRLVYASLHQDICPISSYRGKCSI FHKDEVFDVLPNEKECIIRPNIFYFDELFDRYTLKYYKVYSTDKILNKWNSKSPFLYV LNRRFRYIYTEPKYPLENVLKKYVFHELEVNELSPADYQWDKRCQFCKEWCIQKESLS CDECGVCAHLYCMDPPLDRKPNKDVVWTCFSCLQKQQGTKDSHVRFLEEQALELDFIR SVRQKIEEISSKAIKENVGYNTENCWFQYLGIYSISHIGDALNDSMFFPYPFKPSRVG VKYQWNGCNHNVPWRRNSYISANSEEERGSTKTSELAWVLDASKITTRKLSEYIEQCK SEICPILNVRGETCNFIDVVLKNLLFTNYDTAEAFKKCKRELSRKFLKEPSFTAVEIR KFEEAVEKFGSELRPVCEYVGTQPMSMIVRFYYNWKKTERGLTVRGKLSKLSKNKRKK EIANHENDVETKYIDDSSFDTEKLSLAESSFQCMFCKTDYSPMWYRVTGGSDDEKIKI RMQTGVNEKTEISEKSPAHSKKNEKLGALCIRCARMWRRYAIKWVPPLETLRKITGTC QNSFYSAIEGIIEENNTNKFTLSPFQAHNKLLEWELVQDSELIIRQRMKVYKNPNSFV KMKRYSMTFHTQLYKMAVRSYRKNEFHPETMQRDLELFIEDNKEVRKAIPEQKPERAK NTKDEFPVNIIRQSPGTIKTSDTSRNRKCNDVFIEKASNNNIPKITNASNDLIEISIK TGGSSSGSVSVDKGFKFVKFDNKTFQRLRNSLKLVNNKLPKYNEPSTKKIKMINDIAL SNPLNEPNGASYNYTVISHSKETSVALEKYHDGNKPSKMLEKDMILKHTKNKPKNPDT AWANNSARTFCSVCKEKFNDNDNYEVVCGNCGLTVHYFCYAIKLPKDMKKNTNLKTFK WLCDPCSNDLNPIISTTYQCSMCPTKDYDYDRYRSQSFKICPDALKCTSLGTWVHLVC SLFNEDIKYGNGQSMQPALNTTAVLIKHSRFTCGVCRINGGGLVKCNKCQYRYHITCA QNSSNFKLMFEKKNMSVDTTLPCIKDVKLNDTYTLRPILICDRHDISLEGNELYPLSY KPQHTLSYIEQYCRYYKCESDHSLVELRYFEQLRLRHGEMPGNSHDSAIKPKIYVLPF ERTCPHCGTNKSLYWYEDIICHSCNLRSGAQELDFDSASANISNDNGLPVEITQQLME GIEPAMFDIDISEAGTDKNTHPSSQ" gene 269206..270585 /gene="Ceg1" /locus_tag="R008_G10836" mRNA 269206..270585 /gene="Ceg1" /locus_tag="R008_G10836" /product="Ceg1p" CDS 269206..270585 /gene="Ceg1" /locus_tag="R008_G10836" /note="Similar to YGL130W 'Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is CET1, an RNA 5'-triphosphatase) involved in adding the 5' cap to mRNA; the mammalian enzyme is a single bifunctional polypeptide'" /codon_start=1 /product="Ceg1p" /protein_id="EWG86257.1" /translation="MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFP GSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYL VNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRC LTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLD KLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDD RNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSD EEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSV SLEDLEEIVGDIKRCWDERRANMAGGSGRPLPSQSQNATLSTSKPVHSQPPSNDKEPK YVDEDDWSD" gene complement(270784..272249) /gene="Rsm23" /locus_tag="R008_G10841" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(272354..273205) /gene="Cwc23" /locus_tag="R008_G10846" mRNA complement(272354..273205) /gene="Cwc23" /locus_tag="R008_G10846" /product="Cwc23p" CDS complement(272354..273205) /gene="Cwc23" /locus_tag="R008_G10846" /note="Similar to YGL128C 'Component of a complex containing Cef1p, putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p'" /codon_start=1 /product="Cwc23p" /protein_id="EWG86258.1" /translation="MPGHELEDVINQRLNLYDVLELPTPLDVHTIYDDLPQIKRKYRT LALKYHPDKHPDNPSIIHKFHLLSTATNILTNADVRPHYDRWLIEFLRKTNDIERNKL IQKLEESESSTIPTTTPHPDLLQIQRHGELLRKLKHFNLPYGDWKHLNTQDQENASQH PYYDCSTLRIVLDNFLQSNNKSNCLSHLRNQVFITLSANEIYDIYFSERNNYSKDDSI IIYTVFDTPITAQHVFRNWSSGNLIPTVKDISPLIPLHYYSDFNLETELNDDIARLVS NEPILLD" gene complement(273453..273836) /gene="Soh1" /locus_tag="R008_G10851" mRNA complement(273453..273836) /gene="Soh1" /locus_tag="R008_G10851" /product="Soh1p" CDS complement(273453..273836) /gene="Soh1" /locus_tag="R008_G10851" /note="Similar to YGL127C 'Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; involved in telomere maintenance; conserved with other metazoan MED31 subunits'" /codon_start=1 /product="Soh1p" /protein_id="EWG86259.1" /translation="MSSTNGNAPATPSSDQNPLPTRFEVELEFIQSLANIQYVTYLLT QQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFILKLLNGFMESAIVNEDGLLEG LDELPKIIQLQGPQWMNEMVERWAN" gene 274058..275200 /gene="Scs3" /locus_tag="R008_G10856" mRNA 274058..275200 /gene="Scs3" /locus_tag="R008_G10856" /product="Scs3p" CDS 274058..275200 /gene="Scs3" /locus_tag="R008_G10856" /note="Similar to YGL126W 'Protein required for inositol prototrophy, identified as an ortholog of the FIT family of proteins involved in triglyceride droplet biosynthesis; disputed role in the synthesis of inositol phospholipids from inositol'" /codon_start=1 /product="Scs3p" /protein_id="EWG86260.1" /translation="MSSKWFNAIHLLVCPLTVLVGYLMNAYGYGAALQATLNKDGLVN AMLVKKGWFWTSLVGWWCIIRYRAVPGATGRDRRHIVQSFKRYAILTVWWYVFTQGIW FGVGPIMDLVFVYTGGHCHYDVFDDAGHVNEDFQGSVTRTNRALALIHNVLTLHGHHQ EHRQQQLWDRSIGSIQGALQATQPKTPKNVTASAAAAINTFIHDQMHRWQGPLTTSAQ CRRFGGHWAGGHDPSGHVFLATLMCMFLLGELRVFGRRALAHLYAQKWQLVRLVTRLF DTGPLWTWRRCGGGSMTCGARLWRAIVEPPVTCAAALLRLTRCIACDHPVIILLTLLV TWLWQLLLTAVASRFHTVREHMSGLLAAYIVTGLVYARDAAALRPV" gene 275574..277376 /gene="Met13" /locus_tag="R008_G10871" mRNA 275574..277376 /gene="Met13" /locus_tag="R008_G10871" /product="Met13p" CDS 275574..277376 /gene="Met13" /locus_tag="R008_G10871" /note="Similar to YGL125W Major isozyme of methylenetetrahydrofolate reductase, catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway" /codon_start=1 /product="Met13p" /protein_id="EWG86261.1" /translation="MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYE ASLPQFIDITWNAGGGRLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENA YHSGCQNILALRGDPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECH PELPNKDVKLDLEYLKQKIDAGGDFIITQMFYDVDNFINWCSQVRAAGMDVPIIPGIM PITTYAAFLRRAQWGQISIPQHFSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYV SHLHIYTMNLEKAPLMILERLNILPMESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFW KRRPYSYVARTSQWAVDEFPNGRFGDSSSPAFGDLDLCGSDLIRQSANKCLELWSTPT SINDVAFLVINYLNGNLKCLPWSDIPINDEINPIKAHLIELNQHSIITINSQPQVNGI RSNDKIHGWGPKDGYVYQKQYLEFMLPKTKLPKLIDTLKNNEFLTYFAIDSQGDLLSN HPDNSKSNAVTWGIFPGREILQPTIVEKISFLAWKEEFYHILNEWKLNMNKYDKPHSA QFIQSLIDDYCLVNIVDNDYISPDDQIHSILLSL" gene complement(277673..279765) /gene="Mon1" /locus_tag="R008_G10881" /note="nonfunctional due to frameshift determined by sequencing error" assembly_gap 277702..277953 /estimated_length=252 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 280669..281433 /gene="Rps2" /locus_tag="R008_G10891" mRNA 280669..281433 /gene="Rps2" /locus_tag="R008_G10891" /product="Rps2p" CDS 280669..281433 /gene="Rps2" /locus_tag="R008_G10891" /note="Similar to YGL123W 'Protein component of the small (40S) subunit, essential for control of translational accuracy; phosphorylation by C-terminal domain kinase I (CTDK-I) enhances translational accuracy; methylated on one or more arginine residues by Hmt1p'" /codon_start=1 /product="Rps2p" /protein_id="EWG86262.1" /translation="MSAPEAQQQKRGGFGGRNRGRPNRRGPRNTEEKGWVPVTKLGRL VKAGKITTIEEIFLHSLPVKEFQIIDTLLPGLQDEVMNIKPVQKQTRAGQRTRFKAVV VVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTG KCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAI GNTYGFLTPNLWAEQPLPVSPLDIYSDEASAQKKRF" gene complement(281911..283488) /gene="Nab2" /locus_tag="R008_G10901" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(283742..284122) /gene="Gpg1" /locus_tag="R008_G10906" mRNA complement(283742..284122) /gene="Gpg1" /locus_tag="R008_G10906" /product="Gpg1p" CDS complement(283742..284122) /gene="Gpg1" /locus_tag="R008_G10906" /note="Similar to YGL121C 'Proposed gamma subunit of the heterotrimeric G protein that interacts with the receptor Gpr1p; involved in regulation of pseudohyphal growth; requires Gpb1p or Gpb2p to interact with Gpa2p; overproduction causes prion curing'" /codon_start=1 /product="Gpg1p" /protein_id="EWG86263.1" /translation="MFYLSDIEEEASAGAEPTYNFWEVLLFSNTQENLVTVVGELHTL TDRVVHYKIEPESREVTATTLPSLLALLLEKRNQARRLYRDVLSMKMSELDWDIDDLF TQLQEELTRTDDTLSMYPRRRFYH" assembly_gap 284308..284321 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(284595..286898) /gene="Prp43" /locus_tag="R008_G10911" mRNA complement(284595..286898) /gene="Prp43" /locus_tag="R008_G10911" /product="Prp43p" CDS complement(284595..286898) /gene="Prp43" /locus_tag="R008_G10911" /note="Similar to YGL120C RNA helicase in the DEAH-box family, functions in both RNA polymerase I and polymerase II transcript metabolism, involved in release of the lariat-intron from the spliceosome" /codon_start=1 /product="Prp43p" /protein_id="EWG86264.1" /translation="MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVH HDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEF LKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRV AEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH ERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVEL YYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREE GCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVV DPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELI EQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEG NLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRAD DAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLE RLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIH PSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSL ERIKEKVDRLNELKQGKNKKKSKHSKK" gene 287402..288907 /gene="Abc1" /locus_tag="R008_G10921" mRNA 287402..288907 /gene="Abc1" /locus_tag="R008_G10921" /product="Abc1p" CDS 287402..288907 /gene="Abc1" /locus_tag="R008_G10921" /note="Similar to YGL119W 'Protein required for ubiquinone (coenzyme Q) biosynthesis and for respiratory growth; exhibits genetic interaction with COQ9, suggesting a common function; similar to prokaryotic proteins involved in early steps of ubiquinone biosynthesis'" /codon_start=1 /product="Abc1p" /protein_id="EWG86265.1" /translation="MVTNMVKLRNLRRLYCSSRLLRTIQNGRISSVSSISLSKKYTTK SAKEGEENVERKHEEEKKDTLKSSSVPTSRISRLFHYGSLAAGVGMNAAAKGISEVAK GNSPTWKSLILSDSNIDRITNKFSKMRGVALKIGQLLSFQDEKVLPKELYEILSRVQN SANHMPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQ YPGVKESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKF EALLKDDPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCL EEIATFKYMQTDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDR KGAYEMSVQLGYLTGLESQSMKDAHVDSVLTLGEPFRGDVDKSFDFKDQTVSDRIRGN IGLMLNERLCPPPEETYSLHRKFSGIFLLCARMGASVHCAKLFKEIFAYKV" gene complement(290306..290411) /locus_tag="R008_G10931" tRNA complement(290306..290411) /locus_tag="R008_G10931" /product="tRNA-Trp" /note="TW(CCA)G1" gene 291467..292264 /locus_tag="R008_G10941" mRNA 291467..292264 /locus_tag="R008_G10941" /product="hypothetical protein" CDS 291467..292264 /locus_tag="R008_G10941" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86266.1" /translation="MQPISIKDVESDQGKVYIVNALKDLVCKCLLEFVDIQIESFMYP DDPKCFTRIFKGNKIVNEASDKDSKVRSYPSSLGVGHSALFPLIYIRQKTNSLRFLND PKQLPTPLVDDMNAKFKGIIKVYENLIHLYHSYQTVDCNNMNQQKLLGDLVSRGNFML DILHGYVTIASTIVRDSKDANILIDTVNRFIHDTILFHKRIIHNSNAYTEYLVMKRGM QRNQSEETLVELEFRTLDVSDVNLDNEFDDFLQHRKTSLKITHRRVI" gene 292764..294596 /gene="Cdc20" /locus_tag="R008_G10946" mRNA 292764..294596 /gene="Cdc20" /locus_tag="R008_G10946" /product="Cdc20p" CDS 292764..294596 /gene="Cdc20" /locus_tag="R008_G10946" /note="Similar to YGL116W 'Cell-cycle regulated activator of anaphase-promoting complex/cyclosome (APC/C), which is required for metaphase/anaphase transition; directs ubiquitination of mitotic cyclins, Pds1p, and other anaphase inhibitors; potential Cdc28p substrate'" /codon_start=1 /product="Cdc20p" /protein_id="EWG86267.1" /translation="MPESSRDKGNAAISGNRSVLSIASPTKLNILSSDWSRNQGKVSK NSLKRSSSLNIRNSKRPSLQASANSIYSRPKITIGAPPLIRRDSSFFKDEFDAKKDKA TFSAYSSRSYPTIGSDSVVSQTSLSQPTTSREVDEQFTVAADRYIPILQGASQNKVDP ETLHEALPPPNASPISHLRAQTKIVFKQNVAEACGLDMNKRILQYMPEPPKCSSLRQK SYIMKKRTHYSYQQEQKIPDLIKLRKINTNPERILDAPGFQDDFYLNLLSWSKKNVLA IALDTALYLWNATTGDVSLLTDFENTTICSVTWSDDDCHISIGKEDGNTEIWDVETMS LIRTMRSGLGVRIGSLSWLDTLIATGSRSGEIQINDVRIKQHIVSTWAEHTGEVCGLS YKSDGLQLASGGNDNTVMIWDTRTSLPQFSKKTHSAAVKALSWCPYSPNILASGGGQT DKHIHFWNSITGARVGSINTGSQVSSLHWGQSHTSTNGGMMNKEIVATGGNPENAISV YNYETKFKVAEVVHAHEARICCSQLSPDGTTLATVGGDENLKFYKIFDPRCTGRSRED GLMDGMLGLIGKEGCRTNDKENRSKNSSEIHTRRPSSTSQYLIR" gene 294987..295955 /gene="Snf4" /locus_tag="R008_G10951" mRNA 294987..295955 /gene="Snf4" /locus_tag="R008_G10951" /product="Snf4p" CDS 294987..295955 /gene="Snf4" /locus_tag="R008_G10951" /note="Similar to YGL115W 'Activating gamma subunit of the AMP-activated Snf1p kinase complex (contains Snf1p and a Sip1p/Sip2p/Gal83p family member); activates glucose-repressed genes, represses glucose-induced genes; role in sporulation, and peroxisome biogenesis'" /codon_start=1 /product="Snf4p" /protein_id="EWG86268.1" /translation="MKPTQDSQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVL DTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVD KLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREI VVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQG RVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTK NDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLGSN" gene 296414..298590 /locus_tag="R008_G10956" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 298885..300891 /gene="Sld3" /locus_tag="R008_G10966" mRNA 298885..300891 /gene="Sld3" /locus_tag="R008_G10966" /product="Sld3p" CDS 298885..300891 /gene="Sld3" /locus_tag="R008_G10966" /note="Similar to YGL113W 'Protein involved in the initiation of DNA replication, required for proper assembly of replication proteins at the origins of replication; interacts with Cdc45p'" /codon_start=1 /product="Sld3p" /protein_id="EWG86269.1" /translation="METWEVIASVKEATKGLDLSLDHPLIIKSEDVPSNILQLLQQKN RRQLKHICMKSRKEYFLLEEYGPGFWVKWPYNYFNGYSLPERRTEVVTTVERERAKRE TLKTWDELKFKELLHLWSEEPKGSCKLEKDKDLKLDMNPPDMKGESKINDYYSDPKEY IESKYYDALFSIHTPLAYFVKSNLVRLKNTCRTKYGSDSYKIAYQAMLQKFLLSIVQF KDRHDNRLLLEPFSSPIADEKRKNCLTKFVIQDENKNSSTIADLCVVLKSREIKLQIL LLLEIIGLNDLDWNFRDFEKKYKLKLKKRSLNLTKKGLVRRRSKKKTSEKDKGIERIT TSLDYCEQLDLYLDRACILDILLSSETPNPDAIEASNGTIQEHKKNILDKSKEASLVG FINYVLIPYFNKKVPHAVEFIIQKLKGPSMRPKRALKKVNDSTNVSSPNTVETYNRLS TSQRASRSSIINSVPSSPALRRVDANLFSRKSIASPTPELLNSRTNSNLNEFLESETR SLKRPSQLGRTKSDLTMNHLQKRQFSVSDLSTTRVPNSSTITLKTPFSHSTINAYKTM NNSFRRVGKRKDINETIRLHERVDSEENVQVQATPAVKKRTVTPNKKAQLQSIIESPL NFKDDDTHEGRKNTSNITSTPTNKPPENSSKRRVRRRLFAPEST" gene complement(301127..302677) /gene="Taf6" /locus_tag="R008_G10976" mRNA complement(301127..302677) /gene="Taf6" /locus_tag="R008_G10976" /product="Taf6p" CDS complement(301127..302677) /gene="Taf6" /locus_tag="R008_G10976" /note="Similar to YGL112C Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4" /codon_start=1 /product="Taf6p" /protein_id="EWG86270.1" /translation="MSTQQQSYTIWSPQDTVKDVAGSLGLENINDDVLKALAMDVEYR ILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTS GGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVS QPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHV LSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQI TQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQ EIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYG CLKGVSVLEGESIRFFLGNLNNWARLVFNESGITLDNIEEHLNDDSNPTRTKFTKEET QILVDTVISALLVLKKDLPDLYEGKGEKVTDEDKEKLLERCGVTIGFHILKRDDAKEL ISAIFFGE" gene 302927..304317 /gene="Nsa1" /locus_tag="R008_G10981" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(304485..306359) /gene="Cue3" /locus_tag="R008_G10986" mRNA complement(304485..306359) /gene="Cue3" /locus_tag="R008_G10986" /product="Cue3p" CDS complement(304485..306359) /gene="Cue3" /locus_tag="R008_G10986" /note="Similar to YGL110C 'Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination'" /codon_start=1 /product="Cue3p" /protein_id="EWG86271.1" /translation="MLSRYNRVIEINGGNADISLPIVKFPPFKLRAQLIEKDPVVWLH LIETYVAYFEYLMQGANVELLDESTLDHLRLFLRTYLHEIADEEGKLLSLGINHDVSE QLYLLKGWIFSLIKKCGLLHLQIFGDSLWNLIKVYVRRNPDSIRGLIDGSLKPRINTQ RVQLDKSYQVQQHLKQLIESGKFKRIDLRCVEDLLSAKSMQPNKFAENFFTANWIEIL EALWAKGQGRGHKEARELIIISLFSVSADRLLKITKELGISNFETLALYPLLGTMLIN EGVHKRLPDLKSKLLFLNLGGLSMDEGDHMSYPISSGTEVNEEQLSALMELFPQFSKY QLSQTLLAYDNNIELVTNKIFEDPTIIEAFPREPAEEEVEPVSDGDNASFTEELSILD RGDSSKNKELDKKIISEGVPDELRNKTLTRALKLLYEADEDERDDTYDEADVNRSDPS KRIGLQEDEESYDTKDDSNEVRQDHNYHIVEAYLWNLLKEDPKLFERSKRGTKVRKTM KEMTSWSDEKIEGWCRMLERSPTRARLLEKKFMFKGNSKTGKTSYVHNRDSQNDGNVV KEQAKQKKSENIKKHEPQSTEQKKRQHAKNEKRKGARANHNRKKGHDKKLARAGNNAI " gene complement(306596..307018) /locus_tag="R008_G10996" mRNA complement(306596..307018) /locus_tag="R008_G10996" /product="hypothetical protein" CDS complement(306596..307018) /locus_tag="R008_G10996" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86272.1" /translation="MGLCGSKTQPMPSQTTTVATKARTKPINRDTVKSKQELRHKEKK DKKKKTQLKSTTVPVVQKKEGSKLTDTSDPSKNKVSPKEAARLAAEKRFQETNEKYNK GELGKKLAQERAKSHKTRLMEEAEKKHAERERENMIYD" gene complement(307280..309220) /gene="Rmd9" /locus_tag="R008_G11001" mRNA complement(307280..309220) /gene="Rmd9" /locus_tag="R008_G11001" /product="Rmd9p" CDS complement(307280..309220) /gene="Rmd9" /locus_tag="R008_G11001" /note="Similar to YGL107C 'Mitochondrial protein required for respiratory growth; mutant phenotype and genetic interactions suggest a role in delivering mt mRNAs to ribosomes; located on matrix face of the inner membrane and loosely associated with mitoribosomes'" /codon_start=1 /product="Rmd9p" /protein_id="EWG86273.1" /translation="MMLRRNAVRSLKTMEISVSNVVNSGSIAMLRGKLANVVLSDRTY HSSPIFHKNVPKGVLDKKNGREQRKTEQNVSNVDPASPWRHELLSFDECVSSALKYST TPLQNTYKRIGNNELNKNPSFAMFWDSMGRAMELYYSLRESPDFNAYRVSRLIHLLHN GLRSTRDQLVKLSRKPDYDSQSFHKEMMNFLCNSLKDISDDILIGKVSVSGYGATHLL TSFKELSFDDDCIRIWEASKNLSDETTSQAFQEPKVVGFMLPLLYAKTRSLTEPNELY NQIIQSKEFIHPNLYSGLIKVFIKAEDYEKALSLFGQLCEKAEVRNYGYLIETHLSFI GDSKNLTLAESFFDKIINDEMPYKIILQVSTVNSFLQNIWKAQNDFDHVYRIWEKAVK FYGNTVNPGILSSLNNTFFTIFFENYVNDNINGFRKLQEIITFYSGVKKIDEPFFNVM LTRASIWHERSIIDFIDKNYTLYHIPRTIISYRILLKSLGSIDNTNNEEILDRWLELV KKLNELGQQYIANADLSALRDATVVWSQSKRDEKVFSAKAKGTPATTTITEDDIKVPK PLEDLKNEDSTSNSEDRIELYLKILKRYTPYFRATKQVYRYTTGCAESYPILNEYLSG YSDLSAEDIPVPQLHSFIAKEQ" gene 309507..309956 /gene="Mlc1" /locus_tag="R008_G11006" mRNA 309507..309956 /gene="Mlc1" /locus_tag="R008_G11006" /product="Mlc1p" CDS 309507..309956 /gene="Mlc1" /locus_tag="R008_G11006" /note="Similar to YGL106W 'Essential light chain for Myo1p, light chain for Myo2p; stabilizes Myo2p by binding to the neck region; interacts with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition'" /codon_start=1 /product="Mlc1p" /protein_id="EWG86274.1" /translation="MSATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQ DIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVS VGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLRQ" gene 310404..311534 /gene="Arc1" /locus_tag="R008_G11011" mRNA 310404..311534 /gene="Arc1" /locus_tag="R008_G11011" /product="Arc1p" CDS 310404..311534 /gene="Arc1" /locus_tag="R008_G11011" /note="Similar to YGL105W 'Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases (Mes1p and Gus1p), delivering tRNA to them, stimulating catalysis, and ensuring their localization to the cytoplasm; also binds quadruplex nucleic acids'" /codon_start=1 /product="Arc1p" /protein_id="EWG86275.1" /translation="MSDLVTKFESLIISKYPVSFTKEQSAQAAQWESVLKSGQIQPHL DQLNLVLRDNTFIVSTLYPTSTDVHVFEVALPLIKDLVASSKDVKSTYTTYRHILRWI DYMQNLLEVSSTDKLEINHDLDLPHEVIEKKKKAPAGGAADAAAKADEDVSKKAKKQD HPRGKPDEETLKKLREEAKAKKAAKKAANAKQQQEQQNKAPEKPKPSAIDFRVGFIQK AIKHPDADSLYVSTIDVGDEEGPRTVCSGLVKHFPLDAMQERYVVVVCNLKPVNMRGI KSTAMVLCGSNDDKVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKIWEHLQPHF TTNDGLEVIFKDEEEKDHPVRKLTNAKGESFKVASIANAQVR" gene complement(311680..313140) /gene="Vps73" /locus_tag="R008_G11016" mRNA complement(311680..313140) /gene="Vps73" /locus_tag="R008_G11016" /product="Vps73p" CDS complement(311680..313140) /gene="Vps73" /locus_tag="R008_G11016" /note="Similar to YGL104C 'Mitochondrial protein; mutation affects vacuolar protein sorting; putative transporter; member of the sugar porter family'" /codon_start=1 /product="Vps73p" /protein_id="EWG86276.1" /translation="MNRILSSASLLSNVSMPRQNKHKITKALCYAIIVASIGSIQFGY HLSELNAPQQVLSCSEFDIPMEGYPYDRTWLGKRGYKQCIPLNDEQIGIVTSVFCIGG ILGSYFATSLANIYGRKFSSLINCTLNIVGSLIIFNSNSYRGLIIGRILVGISCGSLI VIIPLFIKEVAPSGWEGLLGSMTQICIRLGVLLTQGIALPLTDSYRWRWILFGSFLIA VLNFFMWFIVDESPKWLLAHGRVTDAKLSLCKLRGVTFDEAAQEIQDWQLQIESGDPL IEPTTTNSISGYNSLWKYLRDRTNVKSRHVITVLLFGQQFCGINSIVLYGTKIISQLY PQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVSVTAFIMGIAMNHNKM NLLIVFSFIYMGVFTMGLNPLPFIIMREVSKPQDMVLAQRYGTICNWVGTFIIAYTFP IIHDVLSGYVFIIFAIIACSISAFIWKKVPETKRSG" gene 313933..314894 /gene="Rpl28" /locus_tag="R008_G11026" mRNA join(313933..313981,314494..314894) /gene="Rpl28" /locus_tag="R008_G11026" /product="Rpl28p" CDS join(313933..313981,314494..314894) /gene="Rpl28" /locus_tag="R008_G11026" /note="Similar to YGL103W 'Ribosomal protein of the large (60S) ribosomal subunit, has similarity to E. coli L15 and rat L27a ribosomal proteins; may have peptidyl transferase activity; can mutate to cycloheximide resistance'" /codon_start=1 /product="Rpl28p" /protein_id="EWG86277.1" /translation="MPSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRIN MDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVI DTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVELIA" gene 315160..315807 /locus_tag="R008_G11036" mRNA 315160..315807 /locus_tag="R008_G11036" /product="hypothetical protein" CDS 315160..315807 /locus_tag="R008_G11036" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86278.1" /translation="MTAVNIWKPEDNIPREILAILSKPHPNYQLAFLNIIQLLKTQRR TGWVDHGIDPCESISDHMYRMGLTTMLITDKNVDRNKCIRIALVHDFAESLVGDITPN DPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDK YEMLVQCFEYEQKYNGKKDLKQFWGAINDIKTDEVKKWTQSLLEDRQAFFDSLKE" gene 316201..317250 /gene="Seh1" /locus_tag="R008_G11041" mRNA 316201..317250 /gene="Seh1" /locus_tag="R008_G11041" /product="Seh1p" CDS 316201..317250 /gene="Seh1" /locus_tag="R008_G11041" /note="Similar to YGL100W 'Nuclear pore protein of the conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); part of the SEA (Seh1-associated) complex, a coatamer-related complex that associates dynamically with the vacuole; homologous to Sec13p'" /codon_start=1 /product="Seh1p" /protein_id="EWG86279.1" /translation="MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSI SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNGADVDMDAQG RSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT YSNEFKCMSVITAQQ" gene 317598..319520 /gene="Lsg1" /locus_tag="R008_G11046" mRNA 317598..319520 /gene="Lsg1" /locus_tag="R008_G11046" /product="Lsg1p" CDS 317598..319520 /gene="Lsg1" /locus_tag="R008_G11046" /note="Similar to YGL099W 'Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from 60S subunits in the cytoplasm'" /codon_start=1 /product="Lsg1p" /protein_id="EWG86280.1" /translation="MPPKEAPKKWKAPKGPKPTHRKNKNKLELGRAIKYARQKENAIE YLPDGEMRFTTDKHEANWVKLRSVTQESALDEFLSTAALADKDFTADRHSNVKIIRMD SGNDSATSQGFSMTNEQRGNLNAKQRALTKDLIVPRRPEWNEGMSKFQLDRQEKEAFL EWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDL ERYVKESDNRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTFYSALRANQLLEKQK EMGEDYREQDFEEADEEGFDADEKVMEKVKILSIDQLEELFLSKAPNEPLLPPLPGQP PLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDSVMLCDCPGLV FPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKYYIEAIYGIHIQTKSRDEGG NGDIPTAQELLVAYARARGYMTQGYGSADEPRASRYILKDYVNGKLLYVNPPPHLEDD TPYTREECEEFNKDLYVFDRLPDTRKEQVQNAAKAKGIDIVDLARDLNQLTFSAHTGG DTQKEAKSVTHGGKQAALYNAAEDLDRDFFKMNNVEGRLSTPFHKVQNSSAGKRHNKK NKSKNAKSKVFSIENN" gene 319755..320022 /locus_tag="R008_G11051" ncRNA 319755..320022 /ncRNA_class="snoRNA" /locus_tag="R008_G11051" /product="SNR82" gene 320309..321046 /gene="Use1" /locus_tag="R008_G11056" mRNA 320309..321046 /gene="Use1" /locus_tag="R008_G11056" /product="Use1p" CDS 320309..321046 /gene="Use1" /locus_tag="R008_G11056" /note="Similar to YGL098W 'Essential SNARE protein localized to the ER, involved in retrograde traffic from the Golgi to the ER; forms a complex with the SNAREs Sec22p, Sec20p and Ufe1p'" /codon_start=1 /product="Use1p" /protein_id="EWG86281.1" /translation="MAETSNDPFLSYVLSSKQLTNLNRLRRKAVTKQLGSSDDNKVSE EFLRYQHTYQREAFEYLQTKHDAHKIMESQYEQYQSSSKTRRYSIDLDSVDAVDTESQ TEYPNEEFIDRSEDSEAVMELRKRLLGKGQNKGLGYETTKSVDRQIEDQDTLQQDLIQ DMSKLVGSLKQGAVAFQSALDEDKQVLGAAEIGIQVASQGLMDVSGKLRKYDKSKLSY LFYITVFIFMILGLVFTFIIIQLFPAL" gene 322758..322829 /locus_tag="R008_G11061" tRNA 322758..322829 /locus_tag="R008_G11061" /product="tRNA-His" /note="TH(GUG)G2" gene 324771..326219 /gene="Srm1" /locus_tag="R008_G11066" mRNA 324771..326219 /gene="Srm1" /locus_tag="R008_G11066" /product="Srm1p" CDS 324771..326219 /gene="Srm1" /locus_tag="R008_G11066" /note="Similar to YGL097W 'Nucleotide exchange factor for Gsp1p, localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p'" /codon_start=1 /product="Srm1p" /protein_id="EWG86282.1" /translation="MVKRTVATNGDASGAHRAKKMSKTHASHIINAQEDYKHMYLSVQ PLDIFCWGTGSMCELGLGPQAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEE SNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPP LAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTF SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHV KYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRS IAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN VPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHN IILVGCGGQFSVSGGVKLSDEDAEKRADEMDD" gene 328326..329156 /gene="Tos8" /locus_tag="R008_G11081" mRNA 328326..329156 /gene="Tos8" /locus_tag="R008_G11081" /product="Tos8p" CDS 328326..329156 /gene="Tos8" /locus_tag="R008_G11081" /note="Similar to YGL096W 'Homeodomain-containing protein and putative transcription factor found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; similar to Cup9p transcription factor'" /codon_start=1 /product="Tos8p" /protein_id="EWG86283.1" /translation="MGTSIVNLNQKIELPPIQVLFESLNRENETKPHFEERRLYQPNP SFVPRTNIAVGSPVNPVPVSSPVFFIGPSPQRSIQNHNAIMTQNIRQYPVIYNNNREV ISTGERNYIITVGGPPVTSSQPEYEHISTPNFYQEQRLAQPHPVNESMMIGGYTNPQP ISISRGKMLSGNISTNSVRGSNNGYSAKEKKHKAHGKRSNLPKATVSILNKWLHEHVN NPYPTVQEKRELLAKTGLTKLQISNWFINARRKKIFSGQNDANNFRRKFSSSTNLAKF " assembly_gap 329214..329265 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 331577..331648 /locus_tag="R008_G11086" tRNA 331577..331648 /locus_tag="R008_G11086" /product="tRNA-Glu" /note="TE(UUC)G1" gene complement(331868..333601) /gene="Vps45" /locus_tag="R008_G11091" mRNA complement(331868..333601) /gene="Vps45" /locus_tag="R008_G11091" /product="Vps45p" CDS complement(331868..333601) /gene="Vps45" /locus_tag="R008_G11091" /note="Similar to YGL095C 'Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting; required for the function of Pep12p and the early endosome/late Golgi SNARE Tlg2p; essential for fusion of Golgi-derived vesicles with the prevacuolar compartment'" /codon_start=1 /product="Vps45p" /protein_id="EWG86284.1" /translation="MNLFDVADFYINKIVTSQSKLSVANVNEHQRIKVLLLDKNTTPT ISLCATQSELLKHEIYLVERIENEQREVSRHLRCLVYVKPTEETLQHLLRELRNPRYG EYQIFFSNIVSKSQLERLAESDDLEAVTKVEEIFQDFFILNQDLFSFDLQPREFLSNK LVWSEGGLTKCTNSLVSVLLSLKIKPDIRYEGASKICERLAKEVSYEIGKNERTFFDF PVMDSTPVLLILDRNTDPITPLLQPWTYQSMINEYIGIKRNIVDLSKVPRIDKDLEKV TLSSKQDAFFRDTMYLNFGELGDKVKQYVTTYKDKTQTNSQINSIEDIKNFIEKYPEF RKLSGNVAKHMAIVGELDRQLKIKNIWEISEIEQNLSAHDANEEDFSDLIKLLQNEAV DKYYKLKLACIYSLNNQTSSDKIRQLVEILSQQLPPEDVNFFHKFKSLFSRQDKMTQS NHDKDDILTELARRFNSRMNSKSNTAENVYMQHIPEISSLLTDLSKNALSRDRFKEID TQGHRVIGNQQSKDIPQDVILFVIGGVTYEEARLVHDFNGTMNNRMRVVLGGTSILST KEYMDSIRSAK" gene complement(334112..337459) /gene="Pan2" /locus_tag="R008_G11096" mRNA complement(334112..337459) /gene="Pan2" /locus_tag="R008_G11096" /product="Pan2p" CDS complement(334112..337459) /gene="Pan2" /locus_tag="R008_G11096" /note="Similar to YGL094C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes" /codon_start=1 /product="Pan2p" /protein_id="EWG86285.1" /translation="MNNWQHFFNNPVDLSEHLKKPYFRFDNRDKEITAISFDEKANLI WSGDSYGCISSYDPTFQLYTRYRGHIGGNSVKDILSHRDGILSISEDSLHFANRRGVT KLNLTSIDIAAFSELNTMCYSPHSLKNNIYCGGDNTNWGIASIDLNRGCLDSLLNYSS KVKLMCSNNKVLSIGRQTGTVDLLDPTSNRTIKSFNAHSASISAMDLRDNTLVTVGKS KRFYNLYADPFVNVYDLRTMRQLPPVSFSKGTTMGSGGADFVQLHPLLPTVMIVASSS GSFDFIDLSNPTLRTQYVHPCQSIKKLCLSPNGDVLGILEADNHLDTWRRSSNNMGMF TNTPEMLAYPDYFNDITSDGPISVDDETYPLSSVGMPYYLDKLLSAWPPVVFKSEGTI PQLTGKSPLPSSGKLKSNLAVISSQNEKLSTQEFPLLRYDRTKYGMRNAIPDYVCLRD IRKQITSGLETSDIQTYTSINKYEVPPAYSRLPLTSGRFGTDNFDFTPFNNTEYSGLD PDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDENFETTLLTDLGYLFDMMERSHGKICS SSNFQASLKSLTDKRQLENGEPQEHLEEYLESLCIRESIEDFNSSESIKRNMPQKFNR FLLSQLIKEEAQTVNHNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINKTV IKQLNKKSNGQNILPYIEYAMKNVTQKNSICPTCGKTETITQECTVKNLPSVLSLELS LLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKITD NNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKTPEIIIYCDAE ELRKPFFSVDTYSINYDILFRDYFANGIRDTARREYKLLTHDEAPKSGTLVAIDAEFV SLQSELCEIDHQGIRSIIRPKRTALARISIIRGEEGELYGVPFVDDYVVNTNHIEDYL TRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGHGLNNDFKHININVPR NQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGNHDSIEDAHTALILYKKYLHLKEK AIFEKVLNSVYEEGRAHNFKVPETSKG" gene 337880..340633 /gene="Spc105" /locus_tag="R008_G11101" mRNA 337880..340633 /gene="Spc105" /locus_tag="R008_G11101" /product="Spc105p" CDS 337880..340633 /gene="Spc105" /locus_tag="R008_G11101" /note="Similar to YGL093W 'Subunit of a kinetochore-microtubule binding complex with Kre28p that bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components'" /codon_start=1 /product="Spc105p" /protein_id="EWG86286.1" /translation="MNVDERSRIGGREKDAGPGKGILKQNQSSQMTSSFLENPGVRIP TRIITKKEVLDGSNTTSRINTSNLQSMVKRRVSFAPDVTLHSFTFVPEQNNEIKEPRR RKTSTNSPTKISSQEEPLVTSTQIDDARTEEKTAAEEDPDTSGMELTEPIVATPDSNK ASQHDPTSMEMTEVFPRSIRQKNPDVEGESIESSQQIDDVEAVREETMELTAIHNVHD YDSISKDTVEGEPIDLTEYESKPYVPNSVSRSTGKSSDYSVERSNDKSDLSKSENKTN SSQPMEITDIFHADPQNPMSLHSDNNINNDGNEMELTQIQTNFDRDNHHIDESPSEKH AFSSNKRRKLDTVSDYAASVTTPVKEAKDTSGEDNDGDLEMMEKMSPITFSDVDNKIG TRSNDVFTIEPGTEDTGMQTATDDEEDGENVDDNGNKIVEKTRLPEIDKEGQSGIALP TQDYTLREFINEVGVGFLDTKLIDDLDKKVNFPLNSFNFVENQRIDNVFSAFYIDIPI LEVEAFRCKELWRSINESKDKFKDFEAQIDKSHPPLLLQEYFSSDEKMKQLMRDQLQL VKGYSKLEAAMEWYEWRKKQLNGLELILAENLNTLKREYEKLNEEVEKVNSIRGKIRK LNEAIKEEIRSLKNLPSDSYKPTLMNRIKIEAFKQELMEHSISLSSSNDFTQEMRSLK LAIAKKSNDILTLRSEVASIDKKIEKRKLFTRFDLPKLRDTLKILESLTGVRFLKFSK ATLSIAFLQLDDLRVDINLANFKNNPLSSMKVMNDSNNDDMSYHLFTMLLKNVEAEHQ DSMLSNLFFAMKKWRPLLKYIKLLKLLFPVKITQTEEEEALLQFKDYDRRNKTAFFYV ISLVSFAQGVFSENGQIPMKVHISTQQDYSPSREVLSDRITHKISGVLPSFTKSRIHL EFT" gene 340900..344886 /gene="Nup145" /locus_tag="R008_G11106" mRNA 340900..344886 /gene="Nup145" /locus_tag="R008_G11106" /product="Nup145p" CDS 340900..344886 /gene="Nup145" /locus_tag="R008_G11106" /note="Similar to YGL092W Essential nucleoporin, catalyzes its own cleavage in vivo to generate a C-terminal portion that assembles into the Nup84p subcomplex of the nuclear pore complex, and an N-terminal portion of unknown function that is homologous to Nup100p" /codon_start=1 /product="Nup145p" /protein_id="EWG86287.1" /translation="MFNKSVNSGFTFGNQNTSTPTSTPAQPSSSLQFPQKSTGLFGNV NVNANTSTPSPSGGLFNANSNANSISQQPANNSLFGNKPAQPSGGLFGATNNTTSKSA GSLFGNNNATANSTGSTGLFGNNHNSSGGLFSGSNNIASSTQNGGLFGNSNNNNITST TQNGGLFGKPTTTPAGAGGLFGNSSSTNSTTGLFGSNNTQSSTGIFGQKPGASTTGGL FGNNGASFPRSGETTGTMSTNPYGINISNVPMAVADMPRSITSSLSDVNGKSDAEPKP IENRRTYSFSSSVSGNAPLPLASQSSLVSRLSTRLKATQKSTSPNEIFSPSYSKPWLN GAGSAPLVDDFFSSKMTSLAPNENSNFPQNVFNFLSSQRADLTELRKLKIDSNRSAAK KLKLLSGTPAITKKHMQDEQDSSKNEPIANADSVTNIDRKENRDNNLDNTYLNGKEQS NNLNKQDGENTLQHEKSSSFGYWCSPSPEQLERLSLKQLAAVSNFVIGRRGYGCITFQ HDVDLTAFTKSFREELFGKIVIFRSSKTVEVYPDEATKPMIGHGLNVPAIITLENVYP VDKKTKKPMKDTTKFAEFQVFDRKLRSMREMNYISYNPFGGTWTFKVNHFSIWGLVNE EDAEIDEDDLSKQEDGGEQPLRKVRTLAQSKPSDKEVILKTDGTFGTLSGKDDSIVEE KAYEPDLSDADFEGIEASPKLDVSKDWVEQLILAGSSLRSVFATSKEFDGPCQNEIDL LFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGVSIKRLPTELQR KFLFDDIYLDKEIEKVTIEARKSNPYPQISESSLLFKDALDYMEKTSSDYNLWKLSSI LFDPVSYPYKTDNDQVKMALLKKERHCRLTSWIVSQIGPEIEEKIRNSSNEIEQIFLY LLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDLAELQLQKWSTGGCSIDKNIS KIYKLLSGSPFEGLFSLKELESEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLP YDDPIGVIFQLYAANENTEKLYKEVRQRTNALDVQFCWYLIQTLRFNGTRVFSKETSD EATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRASTNDHTLNR LKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQ NNELKTLREILNEFPDSERDKWSVSINVFEVYLKLVLDNVETQETIDSLISGMKIFYD QYKHCREVAACCNVMSQEIVSKILEKNNPSIGDSKAKLLELPLGQPEKAYLRGEFAQD LMKCTYKI" gene complement(345082..346068) /gene="Nbp35" /locus_tag="R008_G11111" mRNA complement(345082..346068) /gene="Nbp35" /locus_tag="R008_G11111" /product="Nbp35p" CDS complement(345082..346068) /gene="Nbp35" /locus_tag="R008_G11111" /note="Similar to YGL091C 'Essential iron-sulfur cluster binding protein localized in the cytoplasm; forms a complex with Cfd1p that is involved in iron-sulfur protein assembly in the cytosol; similar to P-loop NTPases'" /codon_start=1 /product="Nbp35p" /protein_id="EWG86288.1" /translation="MTEILPHVNDEVLPAEYELNQPEPEHCPGPESDMAGKSDACGGC ANKEICESLPKGPDPDIPLITDNLSGIEHKILVLSGKGGVGKSTFAAMLSWALSADED LQVGAMDLDICGPSLPHMLGCIKETVHESNSGWTPVYVTDNLATMSIQYMLPEDDSAI IWRGSKKNLLIKKFLKDVDWDKLDYLVIDTPPGTSDEHISINKYMRESGIDGALVVTT PQEVALLDVRKEIDFCKKAGINILGLVENMSGFVCPNCKGESQIFKATTGGGEALCKE LGIKFLGSVPLDPRIGKSCDMGESFLDNYPDSPASSAVLNVVEALRDAVGDV" gene 346345..347610 /gene="Lif1" /locus_tag="R008_G11126" mRNA 346345..347610 /gene="Lif1" /locus_tag="R008_G11126" /product="Lif1p" CDS 346345..347610 /gene="Lif1" /locus_tag="R008_G11126" /note="Similar to YGL090W 'Component of the DNA ligase IV complex that mediates nonhomologous end joining in DNA double-strand break repair; physically interacts with Dnl4p and Nej1p; homologous to mammalian XRCC4 protein'" /codon_start=1 /product="Lif1p" /protein_id="EWG86289.1" /translation="MSQLTEFISCIPVVNEEQNEEDERGLCKIQIEDGAMLETLDENS LSGLRIEKMLVSEGTGIFSKSSFGINDLRIFTGENIDEESKKYVWYELLKMLTGHKVY IASLDEKVVFTKWTCRMQDDEVWKVVMELESSAIIRKIAELTLHPVKKGEIDLFEMAD KLYKDICCVNDSYRNIKESDSSNRNRVEQLARERELLDKLLETRDERTRAMMVTLLNE KKKKIRELHEILRQNNIKLSDDDVLDSALINTEVQKPISELNSPGKRMKRRKTVVEPQ NLQKKLKDTSRRRANRKISNQSVIKMEDDDFDDFQFFGLSKRPIITAKDKLSEKYDDI TSFGDDTQSISFESDSSSDVQKHLVSLEDNGIQISAGRSDEDYGDISGSESETDASAG EKKSSNHSEQSGNDREPCLQTESETDIET" gene complement(347816..348178) /gene="Mf(alpha)2" /locus_tag="R008_G11131" /note="nonfunctional due to frameshift determined by sequencing error" gene 349011..349255 /locus_tag="R008_G11141" ncRNA 349011..349255 /ncRNA_class="snoRNA" /locus_tag="R008_G11141" /product="SNR10" gene complement(349431..349929) /gene="Mms2" /locus_tag="R008_G11146" mRNA complement(join(349431..349833,349919..349929)) /gene="Mms2" /locus_tag="R008_G11146" /product="Mms2p" CDS complement(join(349431..349833,349919..349929)) /gene="Mms2" /locus_tag="R008_G11146" /note="Similar to YGL087C 'Ubiquitin-conjugating enzyme variant involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p'" /codon_start=1 /product="Mms2p" /protein_id="EWG86290.1" /translation="MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGT ILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLRD WKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF" gene 350144..352426 /gene="Mad1" /locus_tag="R008_G11151" mRNA 350144..352426 /gene="Mad1" /locus_tag="R008_G11151" /product="Mad1p" CDS 350144..352426 /gene="Mad1" /locus_tag="R008_G11151" /note="Similar to YGL086W 'Coiled-coil protein involved in the spindle-assembly checkpoint; phosphorylated by Mps1p upon checkpoint activation which leads to inhibition of the activity of the anaphase promoting complex; forms a complex with Mad2p'" /codon_start=1 /product="Mad1p" /protein_id="EWG86291.1" /translation="MDVRAALQCFFSALSGRFTGKKLGLEIYSIQYKMSNSGGSSPFL ESPGGSPDVGSTNGQSNRQIQALQFKLNTLQNEYEIEKLQLQKQTNILEKKYKATIDE LEKALNDTKYLYESNDKLEQELKSLKERSANSMNDKDKCIEELRTTLQNKDLEMETLR QQYDSKLSKVTNQCDHFKLEAESSHSLLMKYEKEIKRQSVDIKDLQHQVMEKDDELSS VKASKMINSHPNYSTEEFNELTEMNKMIQDQVQYTKELELANMQQANELKKLKQSQDT STFWKLENEKLQNKLSQLHVLESQYENLQLENIDLKSKLTKWEIYNDSDDDDDNNVNN NDNNNNNKNDNNNDNNNDTSNNNNINNNDTSNNNNINNNNRTKNNIRNNPEEIIRDWK LTKKECLILTDMNDKLRLDNNNLKLLNDEMALERNQILDLNKNYENNIVNLKRLNHEL EQQKSLSFEECRLLREQLDGLYSAQNNALLEVENSETHASNKNVNEDMNNLIDTYKNK TEDLTNELKKLNDQLLSNSNDVETQRKKRKLTSDQIGLNYSQRLNELQLENVSVSREL SKAQTTIQLLQEKLEKLTKLKEKKIRILQLRDGPFIKDQFIKKNKLRLLEKENADLLN ELKKNNPAVETVPISVYDSLNFELKQFEQEVFKSNKRFSRLKQVFNNKSLEFIDVVNS LLGFKLEFQQDSRVKIFSCFKPEKYLIADLNENTLKSNLDADIEGWDDLMNLWVEDRG QLPCFLATITLRLWEQRQAK" gene 352674..353498 /locus_tag="R008_G11156" mRNA 352674..353498 /locus_tag="R008_G11156" /product="hypothetical protein" CDS 352674..353498 /locus_tag="R008_G11156" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86292.1" /translation="MREGDSNSKKSADVAVLSIILTGSTLTLIYTYKRYLTQFKRTND IPRRIFRKHWLYGKVTSVGDGDNFHFFHMPGGIRGGWGWLRPVPQMIKNDSTAEKLVG DSRNMRFFNFNWITHGRSTKSKIQKAKSQFLKLNVPYKNRKNLPTIPIRLCGIDAPER AHFGNPAQPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSL EMLKDGLAVVYEGKVNTEFDDREDKYRYYEFLARSRKKGLWIQNKFETPGEYKKRI" gene complement(353674..355356) /gene="Gup1" /locus_tag="R008_G11161" mRNA complement(353674..355356) /gene="Gup1" /locus_tag="R008_G11161" /product="Gup1p" CDS complement(353674..355356) /gene="Gup1" /locus_tag="R008_G11161" /note="Similar to YGL084C 'Plasma membrane protein involved in remodeling GPI anchors; member of the MBOAT family of putative membrane-bound O-acyltransferases; proposed to be involved in glycerol transport'" /codon_start=1 /product="Gup1p" /protein_id="EWG86293.1" /translation="MSLISILSPLITSEGLDSRIKPSPKKDASTTTKPSLWKTTEFKF YYIAFLVVVPLMFYAGLQASSPENPNYARYERLLSQGWLFGRKVDNSDSQYRFFRDNF ALLSVLMLVHTSIKRIVLYSTNITKLRFDLIFGLIFLVAAHGVNSIRILAHMLILYAI AHVLKNFRRIATISIWIYGISTLFINDNFRAYPFGNICSFLSPLDHWYRGIIPRWDVF FNFTLLRVLSYNLDFLERWENLQKKKSPSYESKEAKSAILLNERGRLTAAHPIQDYSL MNYIAYVTYTPLFIAGPIITFNDYVYQSKHTLPSINFKFIFYYAVRFVIALLSMEFIL HFLHVVAISKTKAWENDTPFQISMIGLFNLNIIWLKLLIPWRLFRLWALLDGIDTPEN MIRCVDNNYSSLAFWRAWHRSYNKWVVRYIYIPLGGSKNRVLTSLAVFSFVAIWHDIE LKLLLWGWLIVLFLLPEIFATQIFSHYTDAVWYRHVCAVGAVFNIWVMMIANLFGFCL GSDGTKKLLSDMFCTVSGFKFVILASVSLFIAVQIMFEIREEEKRHGIYLKC" gene 356115..358529 /gene="Scy1" /locus_tag="R008_G11166" mRNA 356115..358529 /gene="Scy1" /locus_tag="R008_G11166" /product="Scy1p" CDS 356115..358529 /gene="Scy1" /locus_tag="R008_G11166" /note="Similar to YGL083W Putative kinase, suppressor of GTPase mutant, similar to bovine rhodopsin kinase" /codon_start=1 /product="Scy1p" /protein_id="EWG86294.1" /translation="MMFWSSKTGITSKYSFSSSPTFTAEPWSIYTGRPKSSSSSSPSK VSIFMFDKKQFENYLLHYGIIKSKSGSRDKVLIQEAYEILRNQANNLAKLKHPNILTL IEPLEEHSKNFMFVTEFVTSSLETVFRETDDEEQNFLQGHVKDNIVVQRGILQLVNAL DFVHNRASFVHLNIQPRAIFINENSDWKISGLGYLVKIPPGTNTSEYFLPQYDPRVPP FMHLQLNYTAPEIVFENTLTFKNDYFSLGLLIYFLYTGKDLFRSENSTSEYKLEYNKF ESKISTMSWDNIFSKVPQKLRHCIPKLINRDIYSRYDNITLILDSEFFQDPLVKTLNF LDDLPTKNNEEKYVFLEGLVNLLPEFPPALLQKKFLPILLELLSQFCAEKVVSDKCVG KSLDLIIKIGSTLSQLSFQEKVYPVLLSDANFPVLLKKATICLIDNLDTLKQKVKRSD FLENILKPLFNYVLHDSESDITVVCQEKLLSQIPLALEVLDFPTVKQFLLPLLSNLFT KTTSLTVKNTCVTCFQIMIEHKSIDSYTCSETVLPLFKSMKTRDPRILSKLLKLFETV PLIITDEIVLVDQVLPLMWNYSMAPTLTKSQYSGYTKAINKMSSDIQRHHIAKLDDKV NDIGEDAFHKVIEPTIMKKEDPETVAAKNIEVAAMQPVKKKTGSSYGETSPQSKSILN SKPLNPKNALATRGFPTRILNSPPQTPSSRTGSKVMTKGGSNDASSTKVEEEFNEFQS FSSTGSIRQTSAPSDVWMNSTPSPTPTSASSTNLPPGFSISLQPNKRKDGSSDIPRSN VYGSLI" gene 358884..360029 /locus_tag="R008_G11176" mRNA 358884..360029 /locus_tag="R008_G11176" /product="hypothetical protein" CDS 358884..360029 /locus_tag="R008_G11176" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86295.1" /translation="MDVTFLTKNVQINGTQFKILLQNGQGECALIALANVLLISPAHA RYAQEISRLVRGKETVTLNELVQTLADMGVQNPNGTDVDKQQLLQILPQLYSGLNINP EFNGSFEDGVEMSIFRLYNVGIVHGWIIDGDNDPNSYEHVSKYSYMGAQKVLVQSYEI QKNNAQFENSEQIQSDAPYLKSFLARSATQLTEYGLTHLREILVERSYAVLFRNDHFC TLYKNNGELFTLVTDPTYRNRKDINWQSLKSVNGSQDSYYTGNFIPTSLERTETTATG QNESYISNPFSDQNTGHVTSNQVNSGASGVQQIEDDEELARRLQEQEDMRAANNMQNG YANNGRNHQRERFERPEKNSKKNKFLPFNGSNKEKKRDKLKKNCVIM" gene 360434..361401 /locus_tag="R008_G11181" /note="hypothetical protein; nonfunctional due to frameshift determined by sequencing error" gene 361698..362090 /gene="Fmp37" /locus_tag="R008_G11186" mRNA 361698..362090 /gene="Fmp37" /locus_tag="R008_G11186" /product="Fmp37p" CDS 361698..362090 /gene="Fmp37" /locus_tag="R008_G11186" /note="Similar to YGL080W 'Putative protein of unknown function; highly conserved across species and orthologous to human gene BRP44L; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies'" /codon_start=1 /product="Fmp37p" /protein_id="EWG86296.1" /translation="MSQPVQRAAARSFLQKYINKETLKYIFTTHFWGPVSNFGIPIAA IYDLKKDPTLISGPMTFALVTYSGVFMKYALAVSPKNYLLFGCHLINETAQLAQGYRF LKYTYFTTDEEKKALDKEWKEKEKTGKQ" gene 362506..363162 /locus_tag="R008_G11196" mRNA 362506..363162 /locus_tag="R008_G11196" /product="hypothetical protein" CDS 362506..363162 /locus_tag="R008_G11196" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86297.1" /translation="MVTGISEENDDEETFSAVHSSTPSINSQSYAIPITEEMSSSFHD SISTTSNSSGSFDSDGSNVSDVVEQNEMDNESNVDEDLFLDNDIPQSSNLLPTDAQDP GPIFDVSRYIFDSLKQSIDSADFSEALSLQTKTSAVINSKSLELKQYIDEMKSRLTQL QEKFENGEATSKKIKRDLETSRKNIDYLNAALRVDFPIEFNQAREKILERRLNEDHDC " gene complement(363349..364920) /gene="Dbp3" /locus_tag="R008_G11201" mRNA complement(363349..364920) /gene="Dbp3" /locus_tag="R008_G11201" /product="Dbp3p" CDS complement(363349..364920) /gene="Dbp3" /locus_tag="R008_G11201" /note="Similar to YGL078C Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis" /codon_start=1 /product="Dbp3p" /protein_id="EWG86298.1" /translation="MTKEEIADKKRKVVDEEVIEKKKSKKHKKDKKDKKEKKDKKHKK HKKEKKGEKEVEVPEKESEKKPEPTSAVASEFYVQSEALTSLPQSDIDEYFKENEIAV EDPLDLALRPLLSFDYLSLDSSIQAEISKFPKPTPIQAVAWPYLLSGKDVVGVAETGS GKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYG GVPKDEQRIQLKKSQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDI KNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVE VVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGD LSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT GRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFF KDVDLTKKPKKITFD" gene complement(365285..366976) /gene="Hnm1" /locus_tag="R008_G11211" mRNA complement(365285..366976) /gene="Hnm1" /locus_tag="R008_G11211" /product="Hnm1p" CDS complement(365285..366976) /gene="Hnm1" /locus_tag="R008_G11211" /note="Similar to YGL077C 'Choline/ethanolamine transporter; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol'" /codon_start=1 /product="Hnm1p" /protein_id="EWG86299.1" /translation="MSIRNDNASGGYMQPDQSSNASMHKRDLRVEEEIKPLDDMDSKG AVAADGEVHLRKSFSLWSILGVGFGLTNSWFGISTSMVAGISSGGPMMIVYGIIIVAL ISICIGTSLGELSSAYPHAGGQFWWSLKLAPPKYKRFAAYMCGSFAYAGSVFTSASTT LSVATEVVGMYALTHPEFIPKRWHIFVCFELLHLFLMFFNCYGKSLPIISSSSLYISL LSFFTITITVLACSHGKFNDAKFVFATFNNETGWKNGGIAFIVGLINPAWSFSCLDCA THMAFEVEKPERVIPIAIMGTVAIGFVTSFCYVIAMFFSIQDLDAVLSSTTGAPILDI YNQALGNKSGAIFLGCLILFTSFGCVIACHTWQARLCWSFARDNGLPLSRLWSQVNPH TGVPLNAHLMSCAWITLIGLLYLASSTAFQSLITGCIAFLLLSYIIPVICLLAKKRNI AHGPFWLGKFGFFSNIVLLGWTVFSVVFFSFPPVLPVTKDNMNYVCVVIVGYTAYSIL YWKYKGKKEFHALEESENEQAEYSNNFDTIEDSREFSVAASDVELENEHVPWGKK" gene complement(367403..369074) /gene="Rpl7a" /locus_tag="R008_G11216" mRNA complement(join(367403..368032,368511..368604, 369064..369074)) /gene="Rpl7a" /locus_tag="R008_G11216" /product="Rpl7ap" CDS complement(join(367403..368032,368511..368604, 369064..369074)) /gene="Rpl7a" /locus_tag="R008_G11216" /note="Similar to YGL076C 'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)'" /codon_start=1 /product="Rpl7ap" /protein_id="EWG86300.1" /translation="MAAEKILTPESQLKKSKAQQKTAEQVAAERAARKAANKEKRAII LERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKV LQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQR VPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPR KFKHFIQGGSFGNREEFINKLVKSMN" gene complement(369446..369541) /locus_tag="R008_G11226" ncRNA complement(369446..369541) /ncRNA_class="snoRNA" /locus_tag="R008_G11226" /product="SNR39B" gene complement(369992..371155) /gene="Mps2" /locus_tag="R008_G11231" mRNA complement(369992..371155) /gene="Mps2" /locus_tag="R008_G11231" /product="Mps2p" CDS complement(369992..371155) /gene="Mps2" /locus_tag="R008_G11231" /note="Similar to YGL075C 'Essential membrane protein localized at the nuclear envelope and spindle pole body (SPB), required for insertion of the newly duplicated SPB into the nuclear envelope; potentially phosphorylated by Cdc28p'" /codon_start=1 /product="Mps2p" /protein_id="EWG86301.1" /translation="MSNGAFDAIFEYAWGQIDKPISGDFIYGKDLPKLIEIIENIFQK AQKSGSYELRLPLFSEINKDLFRTFSNTKTFFKIHKEEFDDIFFNLVNHPLREILENA FIGVDSIPSDFIVSMNLNSPSKFLVENKSKNTEGAGISTPRKKLTESPIKLLSRNNIG KALEVQVEELKRELTAKQSLLQENERQVSELKIRLETYQEKYASIQQRFSDLQKARQV EDNQNSSRTSDPGSPLVTGIDQKAILEEFRRRLQRQTDTISFLKDQIRRERGLNCSND KVSHSKRKHATTDGDGTFKNFISAVPSNIWVKATIRIIVCFALLAGVLPYIRKYVYAH DTPSQNSRLQLSWWENSGILSKIVWFFEDQTDLETEYRSNANVDDAYSRVFGI" gene 371821..374322 /gene="Hsf1" /locus_tag="R008_G11241" mRNA 371821..374322 /gene="Hsf1" /locus_tag="R008_G11241" /product="Hsf1p" CDS 371821..374322 /gene="Hsf1" /locus_tag="R008_G11241" /note="Similar to YGL073W 'Trimeric heat shock transcription factor, activates multiple genes in response to stresses that include hyperthermia; recognizes variable heat shock elements (HSEs) consisting of inverted NGAAN repeats; posttranslationally regulated'" /codon_start=1 /product="Hsf1p" /protein_id="EWG86302.1" /translation="MNNAANTGTTNESNVSDAPRIEPLPSLNDDDIEKILQPNDIFTT DRTDASTTSSTAIEDIINPSLDPQSAASPVPSSSFFHDSRKPSTSTHLVRRGTPLGIY QTNLYGHNSRENTNPNSTLLSSKLLAHPPVPYGQNPNLLQHAVYRAQPSSGTTNAQPR QTTRRYQSHKSRPAFVNKLWSMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYF KHSNFASFVRQLNMYGWHKVQDVKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQK GSSNNHSSPSGNGNPANGSNIPLDNAAGINNSNNNISSSNSFFNNGHLLQGKTLRLMN EANLGDKNDVTAILGELEQIKYNQIAISKDLLRINKDNELLWKENMMARERHRTQQQA LEKMFRFLTSIVPHLDPKMIMDGLGDPKVNNEKLNSANNIGLNRDNTGTIDELKSNDS FINDDRNSFTNATTNARNNMSPNNDDNSIDTASTNTTNRKKNIDENIKNNNDIINDII FNTNLANNLSNYNSNNNAGSPIRPYKQRYLLKNRANSSTSSENPSLTPFDIESNNDRK ISEIPFDDGEEEETDFRPFTSRDPNNQTSENTFDPNRFTMLSDDDLKKDSHTNDNKHN ESDLFLDNVHRNIDEQDARLQNLENMVHILSPGYPNKSFNNKTSSTNTNSNMESAVNV NSPGFNLQDYLTGESNSPNSVHSVPSNGSGSTPLPMPNDNDTEHASTSVNQGENGSGL TPFLTVDDHTLNDNNTSEGSTRVSPDIKFSATENTKVSDNLPSFNDHSYSTQADTAPE NAKKRFVEEIPEPAIVEIQDPTEYNDHRLPKRAKK" gene 375080..377152 /gene="Aft1" /locus_tag="R008_G11251" mRNA 375080..377152 /gene="Aft1" /locus_tag="R008_G11251" /product="Aft1p" CDS 375080..377152 /gene="Aft1" /locus_tag="R008_G11251" /note="Similar to YGL071W 'Transcription factor involved in iron utilization and homeostasis; binds the consensus site PyPuCACCCPu and activates the expression of target genes in response to changes in iron availability'" /codon_start=1 /product="Aft1p" /protein_id="EWG86303.1" /translation="MEGFNPAHIEHASPINSSDSHSSSFVYALPKSASEYVVNHNEGR ASASGNPAAVPSPIMTLNLKSTHSLNSDQHVHTSTLPTETIGHIHHVEKLNQNNLIHL DPVPNFEDKSDIKPWLQKIFYPQGIELVIERSDTFKVVFKCKAAKRGRNARRKRKDKP KGQDHEDEKSKINDDELEYASPSNATVTNGPQTSPDQTSSIKPKKKRCVSRFNNCPFR VRATYSLKRKRWSIVVMNNNHSHQLKFNPDSEEYKKFKEKLRKDNDVDAIKKFDELEY RTLANLPIPTATIPCDCGLTNEIQSFNVVLPTNSNVTSSASSSTVSSISLDSSNASKR PCLPSVNNTGSINTNNVRKPKSQCKNKDTLLKRTTMQNFLTTKSRLRKTGTPTSSQHS STAFSGYIDDPFNLNEILPLPASDFKLNTVTNLNEIDFTNIFTKSPHPHSGSTHPRQV FDQLDDCSSILFSPLTTNTNNEFEGESDDFVHSPYLNSEADFSQILSSAPPVHHDPNE THQENQDIIDRFANSSQEHNEYILQYLTHFDAANHNNIGVPNNNSHSLNTQHNVSDLG NPLLRQEALVGSSSTKIFDELKFVQNGPHGSQHPIDFQHVDHRHLSSNEPQVRSHQYG PQQQPPQQLQYHQNQPHDGHNHEQHQTVQKDMQTHESLEIMGNTLLEEFKDIKMVNGE LKYVKPED" gene complement(377527..377895) /gene="Rpb9" /locus_tag="R008_G11256" mRNA complement(377527..377895) /gene="Rpb9" /locus_tag="R008_G11256" /product="Rpb9p" CDS complement(377527..377895) /gene="Rpb9" /locus_tag="R008_G11256" /note="Similar to YGL070C 'RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription'" /codon_start=1 /product="Rpb9p" /protein_id="EWG86304.1" /translation="MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVY RHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFV CLSCSHIFTSDQKNKRTQFS" gene 378155..378739 /gene="Mnp1" /locus_tag="R008_G11266" mRNA 378155..378739 /gene="Mnp1" /locus_tag="R008_G11266" /product="Mnp1p" CDS 378155..378739 /gene="Mnp1" /locus_tag="R008_G11266" /note="Similar to YGL068W 'Protein associated with the mitochondrial nucleoid; putative mitochondrial ribosomal protein with similarity to E. coli L7/L12 ribosomal protein; required for normal respiratory growth'" /codon_start=1 /product="Mnp1p" /protein_id="EWG86305.1" /translation="MSLRILAKRSSSIWMKTRVTPALISPITITTRFNSTTTTAPSHK DDVRPVDPKISKIVQDISQLTLLETSSLINELKTVLNIPEISMPMGGFMAGAAGAGAG NVPSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKF VEAAPKVLKENVAKDDAEKIKKTLEDLGAKVSLE" gene 379168..380323 /gene="Npy1" /locus_tag="R008_G11271" /note="nonfunctional due to frameshift determined by sequencing error" gene 380690..382655 /gene="Sgf73" /locus_tag="R008_G11276" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(382818..384345) /gene="Alg2" /locus_tag="R008_G11281" /note="nonfunctional due to frameshift determined by sequencing error" gene complement(384597..386282) /gene="Mrh4" /locus_tag="R008_G11286" mRNA complement(384597..386282) /gene="Mrh4" /locus_tag="R008_G11286" /product="Mrh4p" CDS complement(384597..386282) /gene="Mrh4" /locus_tag="R008_G11286" /note="Similar to YGL064C Mitochondrial ATP-dependent RNA helicase of the DEAD-box family, plays an essential role in mitochondrial function" /codon_start=1 /product="Mrh4p" /protein_id="EWG86306.1" /translation="MSLFFKPVISPQWSFPVLLKIGVRSYAGGPRTKHKGNSPLASVP TGSSNKNRKQKAKGKKGNKKNDPDQAFNFGEYGGLKKDVEMNMDSTNKLIQKISNFDQ LLILPPVRDAVKEIISKESLKLQDSRKKTSENIIPSPIQTVAIKRISKNLMDPKLQIH AIAAETGSGKTMAYLIPLIDYLKRQELETPELWETLRKNVLIRSIILVPTHELVDQVY ETVSKTKTLLGLNSFKWDKATSYRDLLENIKNRIDILVTTPGKLLNLFSIRMITRPDK VLSKVGFVVLDEADTLLDRSWLEETHSAIKRIPNINHLIFCSATIPQEFNKTMQRLFP TVVPIMTPRLHKLPFALDFKVINSALSPFKGSKIKALAQTLYAISNDDTEPGFEKRCI IFVNEKKNVPEIVNLLNKKFGHNAIGLTGEDTFEERSEKIMPFLSPPRPLSEVVAQST SPPTSLKKFEIPDSNIVIGKLKNTNSNGTAPSNKSLHVLVTTDLMARGLNFKGVRNVV LYDVPKTSIDLIHRVGRTARMKQGGRVFMLTDSKTKSWAKALPKIIKKHQRLS" gene 386728..387840 /gene="Pus2" /locus_tag="R008_G11291" mRNA 386728..387840 /gene="Pus2" /locus_tag="R008_G11291" /product="Pus2p" CDS 386728..387840 /gene="Pus2" /locus_tag="R008_G11291" /note="Similar to YGL063W 'Mitochondrial tRNA:pseudouridine synthase; acts at positions 27 and 28, but not at position 72; efficiently and rapidly targeted to mitochondria, specifically dedicated to mitochondrial tRNA modification'" /codon_start=1 /product="Pus2p" /protein_id="EWG86307.1" /translation="MLLGYCGSGYYGMQYNPPHKTIEGEILTKLFDVGAISEENSLAP KKNSFMAAARTDKGVHAMLNLLSLKITLREDTVAKLNAALPPEIRVWGIQPVNKKFNA RSACDSRWYQYLIPEFILIGPPRSSLLHRNVGGCYREDGSQEVWDTFLEQTRGRFSGD ELCRLQDTAQKLSESDPLVQDYVGLLSGTLSGYCLPPSKLDAFEAAMQEYVGTHNFHN FTTGKLWGDPSAQRHIKKVVVSQASPGWICVRIHGQSFMLHQIRRMVALAVLAARCQL PPNIVRNYFNAGPRKYIPRAPAQGLLLEGPVFDGYNTKLRNLLYCEIRPDDITLERMC RFRERQICTAIAHEETQRHVFCHFVRQMNRLATPLI" gene 388270..391806 /gene="Pyc1" /locus_tag="R008_G11301" mRNA 388270..391806 /gene="Pyc1" /locus_tag="R008_G11301" /product="Pyc1p" CDS 388270..391806 /gene="Pyc1" /locus_tag="R008_G11301" /note="Similar to YGL062W 'Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly similar to isoform Pyc2p but differentially regulated; mutations in the human homolog are associated with lactic acidosis'" /codon_start=1 /product="Pyc1p" /protein_id="EWG86308.1" /translation="MSQRKFAGLRDNFNLLGEKNKILVANRGEIPIRIFRTAHELSMQ TVAIYSHEDRLSTHKQKADEAYVIGEVGQYTPVGAYLAIDEIISIAQKHQVDFIHPGY GFLSENSEFADKVAKAGITWIGPPAEVIDSVGDKVSARNLAAKANVPTVPGTPGPIET VEEALDFVNEYGYPVIIKAAFGGGGRGMRVVREGDDVADAFQRATSEARTAFGNGTCF VERFLDKPKHIEVQLLADNHGNVVHLFERDCSVQRRHQKVVEVAPAKTLPREVRDAIL TDAVKLAKECGYRNAGTAEFLVDNQDRHYFIEINPRIQVEHTITEEITGIDIVAAQIQ IAAGASLPQLGLFQDKITTRGFAIQCRITTEDPAKNFQPDTGRIEVYRSAGGNGVRLD GGNAYAGTIISPHYDSMLVKCSCSGSTYEIVRRKMIRALIEFRIRGVKTNIPFLLTLL THPVFIEGTYWTTFIDDTPQLFQMVSSQNRAQKLLHYLADVAVNGSSIKGQIGLPKLK SNPSVPHLHDAQGNVINVTKSAPPSGWRQVLLEKGPAEFARQVRQFNGTLLMDTTWRD AHQSLLATRVRTHDLATIAPTTAHALAGAFALECWGGATFDVAMRFLHEDPWERLRKL RSLVPNIPFQMLLRGANGVAYSSLPDNAIDHFVKQAKDNGVDIFRVFDALNDLEQLKV GVDAVKKAGGVVEATVCFSGDMLQPGKKYNLDYYLEIAEKIVQMGTHILGIKDMAGTM KPAAAKLLIGSLRAKYPDLPIHVHTHDSAGTAVASMTACALAGADVVDVAINSMSGLT SQPSINALLASLEGNIDTGINVEHVRELDAYWAEMRLLYSCFEADLKGPDPEVYQHEI PGGQLTNLLFQAQQLGLGEQWAETKRAYREANYLLGDIVKVTPTSKVVGDLAQFMVSN KLTSDDVRRLANSLDFPDSVMDFFEGLIGQPYGGFPEPFRSDVLRNKRRKLTCRPGLE LEPFDLEKIREDLQNRFGDVDECDVASYNMYPRVYEDFQKMRETYGDLSVLPTRSFLS PLETDEEIEVVIEQGKTLIIKLQAVGDLNKKTGEREVYFDLNGEMRKIRVADRSQKVE TVTKSKADMHDPLHIGAPMAGVIVEVKVHKGSLIKKGQPVAVLSAMKMEMIISSPSDG QVKEVFVSDGENVDSSDLLVLLEDQVPVETKA" gene complement(392024..392767) /gene="Duo1" /locus_tag="R008_G11311" mRNA complement(392024..392767) /gene="Duo1" /locus_tag="R008_G11311" /product="Duo1p" CDS complement(392024..392767) /gene="Duo1" /locus_tag="R008_G11311" /note="Similar to YGL061C 'Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis'" /codon_start=1 /product="Duo1p" /protein_id="EWG86309.1" /translation="MSEQSQLDDSTIDKLIPQIFNEMRSNLNNTTNKFPKSTGGGASD NISANSNSIRSFNSITTQSLLKESESLDKITAMIKNVTAALKNNLPVYVNQVHEVCKS TNSILDSWINIHSQAGYIHKLMSDQTYLKLINDRLHNENVNTNDEDGSTLHNVIALKK KEILDLRQKLENRKGEKDAAPAKPPNQGLNPRYGVQSGRRPVSSAGISNNGRVRKTHV PASKRPSGIPRVTNRWTKPTASSSRKMFR" gene 393121..395046 /gene="Ybp2" /locus_tag="R008_G11316" mRNA 393121..395046 /gene="Ybp2" /locus_tag="R008_G11316" /product="Ybp2p" CDS 393121..395046 /gene="Ybp2" /locus_tag="R008_G11316" /note="Similar to YGL060W 'Central kinetochore associated protein that mediates mitotic progression; interacts with several central kinetochore proteins and the centromeric histone Cse4p; role in resistance to oxidative stress; similarity to Ybp1p and Slk19p'" /codon_start=1 /product="Ybp2p" /protein_id="EWG86310.1" /translation="MYNEQVNSGKSIKEKERYLDALLKILKDNPVTLKEIGWDLPKGL LQFFSRKNINVNIHLVFSPLVSSVMECFNELAINGNPKECLLTACELVSTLHIVLTET GDSDEENEDLNDSNRNDASNITDELSVITPEIGQYMANNTVEFIPNLKIYVLFEFMSL LLKRVDTLYPSKFLAMVTSAIIKYVTTNVQAMDDPHFILRIVYNFCTNYSPAQPSASL TDGISTNDLEKIHDDESALQKKLLANLSVFVISNCLKNHPGNIDKIYFKTLMHKKTDE NEIDASVLQTCHQYYEYVTSLDVHMKELLEKCLVESRSIYNSLLMNPAASTPEFKEEI NQLVYEVSYAYQIKKLADEKNLELDQYGVVILSAIHYSKNGTHLLPQIDIQSAIYLYL RCTTASLFSEIYENKFLESSVRYWLWVSTTETSTEKIKCALQELPGHITTAFLQMLLM KTCNESNNDTKLTEITLLRRLLYLMPESTSFTFIFETLLHCPYITAKIAVLDILRDMM IRSPEAANRDETVGLIEQQNPGNTANSVPIMPTLPPRPYITINEDRMASIHSIALICF SAAKQKKRTQGDLLLVLTYMKFFVSLRNKWDLGLLTLINKEISESFQGEGEPELAFIN ISNNTLGEYIEEMNIRS" gene 395279..396754 /locus_tag="R008_G11321" mRNA 395279..396754 /locus_tag="R008_G11321" /product="hypothetical protein" CDS 395279..396754 /locus_tag="R008_G11321" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86311.1" /translation="MSKYQINCIRYRHFLRTSNISQIPDFTKYCIGPVNEELAPYIME TMKAYPSNSEYINPQHYYHNRTVLVENYLKRSPNPVSLTQLAQYYDDSTKLTRTKIIN SGKFVKEELVIRIAHKLNQLQQLPFNVVNNFHFVQVYESYYNIFESFRKYPTIRTLED ASQFADFIKNMLEGFNTLNLPHLIMGALECTILDLYPREKMDQLLSDLLRARISRRLI VEEHVSITANYTSGKEENTLVLGDIFQECSAKKYLLEASEESQKFIQDMYFKDIPMPE FIIEGDTQLSFYFLPTHLKYLLGEILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDES YLFRISDKAGGVLHDDENLWSFGKSKERAQESLNNFHKLPGLQTVSIYDEVHSHTKYN SKLKSLQSITLKPYMHTSLEPMSYPSIINGHIKYETPLIELLKRSFRYKLGIGLAMCK VYAEYWNGDLSLHSMPGYGTDVVLKLGNLMKHTKKLQLDKV" gene 397042..397557 /gene="Rad6" /locus_tag="R008_G11326" mRNA 397042..397557 /gene="Rad6" /locus_tag="R008_G11326" /product="Rad6p" CDS 397042..397557 /gene="Rad6" /locus_tag="R008_G11326" /note="Similar to YGL058W Ubiquitin-conjugating enzyme (E2), involved in postreplication repair (as a heterodimer with Rad18p), DSBR and checkpoint control (as a heterodimer with Bre1p), ubiquitin-mediated N-end rule protein degradation (as a heterodimer with Ubr1p" /codon_start=1 /product="Rad6p" /protein_id="EWG86312.1" /translation="MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPA DTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDV ASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMDDMDDDD DDDDDDDDEAD" gene complement(398018..398881) /locus_tag="R008_G11331" mRNA complement(398018..398881) /locus_tag="R008_G11331" /product="hypothetical protein" CDS complement(398018..398881) /locus_tag="R008_G11331" /codon_start=1 /product="hypothetical protein" /protein_id="EWG86313.1" /translation="MVLSNVKIFRLKSHRAFRIGPMIKAVAGNLLVKRFYQPKLERIP PASLLLKQKIRLAQNGSTTSTENPISFSQTMSEIFSVLQPSAPDLDEDETSGLKRDHL LTERLNNGELGVIMNKFFNPSSTHNNQLIDTNILLQNFPKLSGNDLDLLDFAINEKMR GNWNDLKQDFIQLWYYKSFGFLGPRTQFVLTNSSPSLRSQFLKLPFIEYNWFLLQNNK NANILPADVQNVVKVFHLDDKRFTWKSIDPFSKAIISFVVFVSIYVWLDESAKQKTKE LPAQKSTVISE" gene complement(399083..400666) /gene="Sds23" /locus_tag="R008_G11336" mRNA complement(399083..400666) /gene="Sds23" /locus_tag="R008_G11336" /product="Sds23p" CDS complement(399083..400666) /gene="Sds23" /locus_tag="R008_G11336" /note="Similar to YGL056C 'One of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; involved in cell separation during budding'" /codon_start=1 /product="Sds23p" /protein_id="EWG86314.1" /translation="MPQNTRHTSIVEMLSTPPQLPNSTDLNSLSEQTDKNTEANKSDT ESLHKSISKSSSSSSLSTLDNTEYSNNNGNSLSTLNSQNLLSVHRQEWQHTPLSNLVE QNKLIFIRGSISVEEAFNTLVKHQLTSLPVENFPGDMNCLTFDYNDLNAYLLLVLNRI KVSNDKITSDCQNGKSVPVGEIVKLTPKNPFYKLPETENLSTVIGILGSGVHRVAITN VEMTQIKGILSQRRLIKYLWENARSFPNLKPLLDSSLEELNIGVLNAARDKPTFKQSR VISIQGDEHLIMALHKMYVERISSIAVVDPQGNLIGNISVTDVKHVTRTSQYPLLHNT CRHFVSVILNLRGLETGKDSFPIFHVYPTSSLARTFAKLVATKSHRLWIVQPNDNQPT ASSEKSSSPSPSTPPVTTLPSLASSYHSNTQSSRMANSPVLKSSDTSNNKINVNINLS GPSPSQPQSPSTAMPPPQSPSNCPASPTPAHFEKEYRTGKLIGVVSLTDILSVLARKQ THHKEIDPQMARKQRGHIG" gene 401684..403216 /gene="Ole1" /locus_tag="R008_G11346" mRNA 401684..403216 /gene="Ole1" /locus_tag="R008_G11346" /product="Ole1p" CDS 401684..403216 /gene="Ole1" /locus_tag="R008_G11346" /note="Similar to YGL055W Delta(9) fatty acid desaturase, required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria" /codon_start=1 /product="Ole1p" /protein_id="EWG86315.1" /translation="MPTSGTTIELIDDQFPKDDSASSGIVDEVDLTEANILATGLNKK APRIVNGFGSLMGSKEMVSVEFDKKGNEKKSNLDRLLEKDNQEKEEAKTKIHISEQPW TLNNWHQHLNWLNMVLVCGMPMIGWYFALSGKVPLHLNVFLFSVFYYAVGGVSITAGY HRLWSHRSYSAHWPLRLFYAIFGSASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGL WYSHMGWMLLKPNPKYKARADITDMTDDWTIRFQHRHYILLMLLTAFVIPTLICGYFF NDYMGGLIYAGFIRVFVIQQATFCINSMAHYIGTQPFDDRRTPRDNWITAIVTFGEGY HNFHHEFPTDYRNAIKWYQYDPTKVIIYLTSLVGLAYDLKKFSQNAIEEALIQQEQKK INKKKAKINWGPVLTDLPMWDKQTFLAKSKENKGLVIISGIVHDVSGYISEHPGGETL IKTALGKDATKAFSGGVYRHSNAAQNVLADMRVAVIKESKNSAIRMASKRGEIYETGK FF" CONTIG join(APIP01000093.1:1..66952,gap(5186),APIP01000094.1:1..15729, gap(230),APIP01000095.1:1..25038,gap(5272), APIP01000096.1:1..139297,gap(480),APIP01000097.1:1..19517,gap(252), APIP01000098.1:1..6354,gap(14),APIP01000099.1:1..44892,gap(52), APIP01000100.1:1..73978) //