LOCUS KJ867558 1350 bp cRNA linear VRL 15-JUN-2014 DEFINITION Influenza A virus (A/reassortant/NIBRG-14(Viet Nam/1194/2004 x Puerto Rico/8/1934)(H5N1)) segment 6 neuraminidase (NA) gene, complete cds. ACCESSION KJ867558 VERSION KJ867558.1 KEYWORDS . SOURCE Influenza A virus (A/reassortant/NIBRG-14(Viet Nam/1194/2004 x Puerto Rico/8/1934)(H5N1)) ORGANISM Influenza A virus (A/reassortant/NIBRG-14(Viet Nam/1194/2004 x Puerto Rico/8/1934)(H5N1)) Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae. REFERENCE 1 (bases 1 to 1350) AUTHORS Cardoso,F.M., Ibanez,L.I., Van den Hoecke,S., De Baets,S., Smet,A., Roose,K., Schepens,B., Descamps,F.J., Fiers,W., Muyldermans,S., Depicker,A. and Saelens,X. TITLE Single domain antibodies targeting neuraminidase protect against an H5N1 influenza virus challenge JOURNAL J. Virol. (2014) In press PUBMED 24829341 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1350) AUTHORS Van den Hoecke,S., Ibanez,L.I., De Baets,S., Smet,A., Roose,K., Schepens,B., Descamps,F.J., Fiers,W., Muyldermans,S., Depicker,A. and Saelens,X. TITLE Direct Submission JOURNAL Submitted (22-MAY-2014) Inflammation Research Center, VIB - UGent, Technologiepark 927, Zwijnaarde, Oost-Vlaanderen 9052, Belgium COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1350 /organism="Influenza A virus (A/reassortant/NIBRG-14(Viet Nam/1194/2004 x Puerto Rico/8/1934)(H5N1))" /mol_type="viral cRNA" /strain="A/reassortant/NIBRG-14(Viet Nam/1194/2004 x Puerto Rico/8/1934)" /serotype="H5N1" /db_xref="taxon:664713" /segment="6" /clone="N1-H5-VHHm escape mutant" /note="single domain antibody N1-5-VHHm escape mutant of mouse-adapted NIBRG-14" gene 1..1350 /gene="NA" CDS 1..1350 /gene="NA" /codon_start=1 /product="neuraminidase" /protein_id="AIC64885.1" /translation="MNPNQKIITIGSICMVTGIVSLMLQIGNMISIWVSHSIHTGNQH QSEPISNTNLLTEKAVASVKLAGNSSLCPINGWAVYSKDNSIRIGSKGDVFVIREPFI SCSHLECRTFFLTQGALLNDKHSNGTVKDRSPHRTLMSCPVGEAPSPYNSRFESVAWS ASACHDGTSWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGSC FTVMTDGPSNGQASHKIFKMEKGKVVKSVELDAPNYHYEECSCYPDAGEITCVCRDNW HGSNRPWVSFNQNLEYQIGYICSGVFGDNPRPNDGTGSCGPVSSNGAGGVKGFSFKYG NGVWIGRTKSTNSRSGFEMIWDPNGWTETDSSFSVKQDIVAITDWSGYSGSFVQHPEL TGLDCIRPCFWVELIRGRPKESTTWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK" BASE COUNT 397 a 250 c 346 g 357 t ORIGIN 1 atgaatccaa atcagaagat aataaccatc ggatcaatct gtatggtaac tggaatagtt 61 agcttaatgt tacaaattgg gaacatgatc tcaatatggg tcagtcattc aattcacaca 121 gggaatcaac accaatctga accaatcagc aatactaatt tgcttactga gaaagctgtg 181 gcttcagtaa aattagcagg caattcatct ctttgcccca ttaacggatg ggctgtatac 241 agtaaggaca acagtataag gatcggttcc aagggggatg tgtttgttat aagagagccg 301 ttcatctcat gctcccactt ggaatgcaga actttctttt tgactcaggg agccttgctg 361 aatgacaagc actccaatgg gactgtcaaa gacagaagcc ctcacagaac attaatgagt 421 tgtcctgtgg gtgaggctcc ctccccatat aactcaaggt ttgagtctgt tgcttggtca 481 gcaagtgctt gccatgatgg caccagttgg ttgacaattg gaatttctgg cccagacaat 541 ggggcggtgg ctgtattgaa atacaatggc ataataacag acactatcaa gagttggagg 601 aacaacatac tgagaactca agagtctgaa tgtgcatgtg taaatggttc ttgctttact 661 gtaatgactg acggaccaag taatggtcag gcatcacata agatcttcaa aatggaaaaa 721 gggaaggtgg ttaaatcagt cgaattggat gctcctaatt atcactatga ggaatgctcc 781 tgttatcctg atgccggcga aatcacatgt gtgtgcaggg ataattggca tggttcaaat 841 cggccatggg tatctttcaa tcaaaatttg gagtatcaaa taggatatat atgcagtgga 901 gttttcggag acaatccacg ccccaatgat ggaacaggta gttgtggtcc ggtgtcctct 961 aacggggcag gtggggtaaa agggttttca tttaaatacg gcaatggtgt ctggatcggg 1021 agaaccaaaa gcactaattc caggagcggc ttcgaaatga tttgggatcc aaatgggtgg 1081 actgaaacgg acagcagctt ttcagtgaaa caagatatcg tagcaataac tgattggtca 1141 ggatatagcg ggagttttgt ccagcatcca gagctgacag gactagattg cataagacct 1201 tgtttctggg ttgagttgat cagagggcgg cccaaagaga gcacaacttg gactagtggg 1261 agcagcatat ctttttgtgg tgtaaatagt gacactgtgg gttggtcttg gccagacggt 1321 gctgagttgc cattcaccat tgacaagtag //