LOCUS KI669176 1237885 bp DNA linear CON 23-MAR-2015
DEFINITION Necator americanus unplaced genomic scaffold
N_americanus-1.0_Cont9, whole genome shotgun sequence.
ACCESSION KI669176 ANCG01000000
VERSION KI669176.1
DBLINK BioProject: PRJNA72135
BioSample: SAMN02953824
KEYWORDS WGS; HIGH_QUALITY_DRAFT.
SOURCE Necator americanus (New World hookworm)
ORGANISM Necator americanus
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Ancylostomatidae;
Bunostominae; Necator.
REFERENCE 1 (bases 1 to 1237885)
AUTHORS Mitreva,M.
TITLE Draft genome of the hookworm Necator americanus
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1237885)
AUTHORS Mitreva,M., Abubucker,S., Martin,J., Minx,P., Warren,C.,
Pepin,K.H., Palsikar,V.B., Zhang,X.W.E. and Wilson,R.K.
TITLE Direct Submission
JOURNAL Submitted (17-APR-2013) The Genome Institute, Washington University
School of Medicine, 4444 Forest Park, St. Louis, MO 63108, USA
COMMENT Necator americanus is a roundworm that causes most of the human
hookworm infections. N. americanus is a blood-feeding nematode
infecting people in the rural areas of the tropics and subtropics
causing an estimated disease burden of 22 million disability
adjusted life years. The life cycle of the parasite begins when
parasite eggs from an infected host are passed in the feces. In
favorable environmental condition they hatch, and through 2 larval
stages develop to the infective stage (L3). L3s penetrate human
skin, migrate through the circulatory system and lung to finally
reside in duodenum. The development continues and the adult stages
attach to the intestinal mucosa and feed on blood.
The strain being sequenced was obtained from the laboratory of Dr.
Peter Hotez by Dr. Bin Zhan, originally isolated from an infected
patient in Hunan province, China, and has been maintained in
hamster since 1976.The adult worms were collected from intestines
of hamsters infected subcutaneously with N. americanus L3 for 8
weeks. Worm isolation and DNA extraction was performed by Bin Zhan
with QIAamp DNA mini kit according to manufacturers instructions
(Qiagen). Jian et. al., 2003 Exp Parasitol.
This assembly consists of fragments, 3kb and 8kb insert whole
genome shotgun libraries. The sequences were generating on the
Roch/454 platform and assembled using Newbler. To improve
scaffolding, an in-house tool CIGA (Cdna tool for Improving Genome
Assembly), was used to map 454 cDNA reads using blat to the genomic
assembly to link genomic contigs based on cDNA evidence. Only joins
confirmed by additional independent data typing were accepted.
The repeat library was generated using Repeatmodeler (A.F.A. Smit,
R. Hubley & P. Green http://repeatmasker.org). The Ribosomal RNA
genes were identified using RNAmmer (Lagesen et. al., 2007 Nucleic
Acids Res.) and transfer RNA's were identified with tRNAscan-SE
(Lowe and Eddy, Nucleic Acids Res. 1997). Non-coding RNAs, such as
microRNAs, were identified by sequence homology search of the Rfam
database (Griffiths-Jones et. al., 2003 Nucleic Acids Res.).
Repeats and predicted RNA's were then masked using RepeatMasker (A.
Smit, R. Hubley & P. Green http://repeatmasker.org). Protein-coding
genes were predicted using a combination of ab initio programs Snap
(Korf, 2004 BCM Bioinformatics), Fgenesh (Salamov A., Solovyev V.
2000, Genome Res.) and Augustus (M. Stanke, et. al., 2008
Bioinformatics) and the annotation pipeline tool Maker (M. Yandell
et. al., 2007 Genomic Research) which aligns mRNA, EST and protein
information from same species or cross-species to aid in gene
structure determination and modifications. A consensus gene set
from the above prediction algorithms was generated, using a
logical, hierarchical approach developed at the Genome institute.
Gene product naming was determined by BER
(http://ber.sourceforge.net).
Our goal is to explore this WGS draft sequence of N. americanus to
better define proteins involved in nematode parasitism that impact
health and disease and are relevant to both host-parasite
relationships and basic biological processes.
For information regarding this assembly or project, or any other
GSC genome project, please visit our Genome Groups web page
(http://genome.wustl.edu/genome_group_index.cgi) and email the
designated contact person. For specific questions regarding the N.
americanus genome project contact Makedonka Mitreva
(mmitreva@genome.wustl.edu) at Washington University School of
Medicine. The National Human Genome Research Institute (NHGRI) of
the National Institutes of Health (NIH) provided funds for this
project.
##Genome-Assembly-Data-START##
Finishing Goal :: High-Quality Draft
Current Finishing Status :: High-Quality Draft
Assembly Method :: Newbler v.
MapAsmResearch-04/19/2010-patch-
08/17/2010
Assembly Name :: N_ americanus_v1
Genome Coverage :: 26.15x
Sequencing Technology :: 454
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1237885
/organism="Necator americanus"
/mol_type="genomic DNA"
/submitter_seqid="N_americanus-1.0_Cont9"
/host="Homo sapiens"
/db_xref="taxon:51031"
/chromosome="Unknown"
/lab_host="hamster"
/country="China: Hunan Province"
assembly_gap 4947..5260
/estimated_length=314
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 7295..7394
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 8286..8385
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 10096..10370
/estimated_length=275
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(10675..13340)
/locus_tag="NECAME_01071"
mRNA complement(join(10675..10719,10816..10926,10988..11153,
11315..11415,11551..11634,11707..11852,11923..12048,
12339..12426,12806..12950,13026..13187,13258..13340))
/locus_tag="NECAME_01071"
/product="WD domain, G-beta repeat protein"
CDS complement(join(10675..10719,10816..10926,10988..11153,
11315..11415,11551..11634,11707..11852,11923..12048,
12339..12426,12806..12950,13026..13187,13258..13340))
/locus_tag="NECAME_01071"
/inference="protein motif:HMMPfam:IPR019781"
/note="KEGG: bmy:Bm1_32745 F-box-like/WD-repeat protein
ebi; K04508 transducin (beta)-like 1 7.3e-142"
/codon_start=1
/product="WD domain, G-beta repeat protein"
/protein_id="ETN68961.1"
/db_xref="InterPro:IPR019781"
/translation="MTSPSRNNGTTLGVHGKKQQAAQQASNLTDVATPRSATTDSNGV
RHTDALEFPEDKVRFLKCHSSEVFICAWNPVEDLMASGSGDSTARIWNLAGSENPATP
SRDFEARTKVLKHCTSGESEKAQQPSNKDVTSLDWDAAGDLLATGCYDGFARIWTAEG
RLRCTLGAHKGPIFALKWNAKGDYILSAGVDKSTIVWDAVKGQQVQQFHFHTASALDV
DWITNDTFASCSTDKSIHVSRLGCDKPIRTYLGHRNEVNAIKYDQHSNRLASCSDDMS
LKIWSLQEDQPVYDWKAHEKEIYTIRWSPLGHMLASASFDHTVRLWDVRRGELVRTLS
RHNDPVYSVSFSPDGRYVASGCFDRSVFIWDIQTGKLLQSYVGEKRKGGIFEVSWNSR
GEKVAASASDGTVILLDVRHIKNCLA"
assembly_gap 13426..14576
/estimated_length=1151
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 16571..16912
/estimated_length=342
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 26920..27990
/estimated_length=1071
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 29656..30264
/estimated_length=609
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 32539..32638
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 33398..33497
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(34944..36443)
/locus_tag="NECAME_01072"
mRNA complement(join(34944..35009,35393..35479,36205..36306,
36363..36443))
/locus_tag="NECAME_01072"
/product="hypothetical protein"
CDS complement(join(34944..35009,35393..35479,36205..36306,
36363..36443))
/locus_tag="NECAME_01072"
/inference="protein motif:HMMPfam:IPR010345"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68962.1"
/db_xref="InterPro:IPR010345"
/translation="MEVVSAETPLRERALCKFEYILNYNPRRLPAALTEVKCSCDRPN
SKLVGKRIFECEHLRYQVRVLMFDETCNTFREHIETIALACIPVVQANANADGEADFM
FPIKAEVPV"
assembly_gap 38182..38670
/estimated_length=489
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 41876..42009
/estimated_length=134
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 43910..44009
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 44683..45177
/estimated_length=495
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 46946..47890
/estimated_length=945
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 49365..49526
/estimated_length=162
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene <52449..62087
/locus_tag="NECAME_01073"
mRNA join(<52449..52610,53881..54002,54100..54211,54468..54608,
55369..55465,55530..55642,55767..55932,56050..56193,
56378..56499,58654..58749,59190..59285,59378..59467,
59817..59954,60611..60739,60979..61092,61234..61315,
61637..61732,61817..61938,62004..62087)
/locus_tag="NECAME_01073"
/product="delta l-pyrroline-5-carboxylate synthetase"
CDS join(<52449..52610,53881..54002,54100..54211,54468..54608,
55369..55465,55530..55642,55767..55932,56050..56193,
56378..56499,58654..58749,59190..59285,59378..59467,
59817..59954,60611..60739,60979..61092,61234..61315,
61637..61732,61817..61938,62004..62087)
/locus_tag="NECAME_01073"
/inference="protein motif:HMMPfam:IPR001048"
/inference="protein motif:HMMPfam:IPR015590"
/inference="protein motif:HMMTigr:IPR000965"
/inference="protein motif:HMMTigr:IPR005715"
/inference="protein motif:HMMTigr:IPR005766"
/note="KEGG: cbr:CBG00074 Hypothetical protein CBG00074;
K12657 delta-1-pyrroline-5-carboxylate synthetase 0."
/codon_start=1
/product="delta l-pyrroline-5-carboxylate synthetase"
/protein_id="ETN68963.1"
/db_xref="InterPro:IPR000965"
/db_xref="InterPro:IPR001048"
/db_xref="InterPro:IPR005715"
/db_xref="InterPro:IPR005766"
/db_xref="InterPro:IPR015590"
/translation="LYYSIKSRKHHLLINSRPELKNAQRIVVKLGSAVITREDECGLA
LGRLASIVEQVAELQQSGRQMLIVSSGAVAFGRQKLRQELVMSMSMRQTLRGPSGMTA
DKRACAASGMPGLMSLYEQLFQQYGITVAQVLLTKPDIDDPQRRKNLQATIESLLSLN
IIPIVNANDAVAPDPKLNMHISDNDSLAARLSAEIEAELLIILSNVNGVYTGPPDMEG
SRLLHTFVPSESAGVVFGANSKFGTGGMESKVNACVTALENGVTTLITNGLAQNAITD
AVSGKKIGTMFCRTHRYEGPPIDEIASKCRDSGRQLASLSNAERAAMVRHLAGLLVTR
ENDIMEANRLDLNNAKSSGLEPQLLNRLKMTKAKIMDLHNGLNMIAESAETLIGRCLR
KIKISDNLFLEQVTVPIGSLMVIFESRPDCLPQVASLAMASGNSLLLKGGKEAEESNR
MLHSIVQEALGTHGYEMRDAVTLVRSREDVAELLQLKDLIDLVIPRGSSDLVRSMQEK
SKGIPVLGHAEGICHVYLDKDLDEQMAIDIVRDSKCDYPSACNAAETILIHRDLISST
FFDQLCGMFKTEGVKLHAGPKMQTLLKFGPPPAESLKFEYGCLECTLEVVDNVDEAIA
HIIRYGSGHTESIVTNNDVTAEHFIKHVDSACTFHNASTRFADGYRFGLGAEVGISTG
RIHARGPVGVEGLLTTKWVLRGNGHTVQDFKPNGRYQYQHEVMNPVEVYRSLEKIQKT
A"
assembly_gap 57797..58084
/estimated_length=288
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 58991..59090
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 63642..63741
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(65020..66221)
/locus_tag="NECAME_01074"
mRNA complement(join(65020..65175,65248..65351,65669..65826,
65903..65983,66076..66221))
/locus_tag="NECAME_01074"
/product="cysteine dioxygenase type I"
CDS complement(join(65020..65175,65248..65351,65669..65826,
65903..65983,66076..66221))
/locus_tag="NECAME_01074"
/inference="protein motif:HMMPfam:IPR010300"
/note="KEGG: cbr:CBG20456 Hypothetical protein CBG20456;
K00456 cysteine dioxygenase 1.0e-71"
/codon_start=1
/product="cysteine dioxygenase type I"
/protein_id="ETN68964.1"
/db_xref="InterPro:IPR010300"
/translation="MATLNELIAKLREIFADDHVDVNEVMRAMESYKSNPSDWRQFAV
FDEHKYTRNLVDIGNGKYNLMILCWGPGMGSSIHDHTDAHCFVKILDGALTETKYEWP
DKDNQEAPMKKTDVTRFDENGVSYMSDKLGLHRMENPSHSDSAVSLHLYIPPYETCNA
FDERTGKKTKCQVTFFTKYGMKVDYKGNKSGTLVDYGSTVVNAPSMTTDIRNVT"
assembly_gap 71026..71125
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 71775..74100
/locus_tag="NECAME_01075"
mRNA join(71775..71837,72047..72074,72384..72435,72501..72600,
72740..72792,73005..73066,73716..73846,73918..74100)
/locus_tag="NECAME_01075"
/product="hypothetical protein"
CDS join(71775..71837,72047..72074,72384..72435,72501..72600,
72740..72792,73005..73066,73716..73846,73918..74100)
/locus_tag="NECAME_01075"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68965.1"
/translation="MRSVCITLCFAAAVLARSASQDGSDSGMPDCLRCDNMFKTTDDV
TVKLLQSKSSILCPFVVVSCPYKNSIIKARLSNGEILELASGSNVEKTMKCRQKRWIT
DEMSEDMMVEEVFCSEKEEEKCPENKECPPPPVCPDPEKKEQCQHPVVFAPFLVYANV
NANEKPVVVPGQLSSDSLPPEIEQTLRERLTPKATSEEHVEHGSEVMSPPFNPWSFAE
VEPKK"
assembly_gap 75080..75772
/estimated_length=693
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 78402..79435
/locus_tag="NECAME_01076"
mRNA join(78402..78554,78632..78749,78822..78876,78934..79039,
79117..79175,79240..79304,79380..79435)
/locus_tag="NECAME_01076"
/product="hypothetical protein"
CDS join(78402..78554,78632..78749,78822..78876,78934..79039,
79117..79175,79240..79304,79380..79435)
/locus_tag="NECAME_01076"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68966.1"
/translation="MRSFLLLSLVVACAWARYGVPQAPAPVQTAPAYGAPAPQPLYAP
QPLVLPYRPFHHRWSSSSSDSRGHRRRRPHRRTTRKPKRYHSTPNYDCKRCKPFTNYP
DSNTVFKYATTMDGCAFAYVTCPTTESEGYLIFGYSSFGWAEVLAQGVYLGGTGLYCD
RNNQWQGVTYNGTTKLPIYDVKCSRYTISVDSKSVFPEKMLKA"
gene complement(82232..84014)
/locus_tag="NECAME_01077"
mRNA complement(join(82232..82431,82511..82560,82633..82688,
82794..82836,82920..82992,83712..83817,83877..84014))
/locus_tag="NECAME_01077"
/product="hypothetical protein"
CDS complement(join(82232..82431,82511..82560,82633..82688,
82794..82836,82920..82992,83712..83817,83877..84014))
/locus_tag="NECAME_01077"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68967.1"
/translation="MWILPLILVLAAVEAGRYGAPQMAPSNPPSYAPSQQWWPVPFYN
PWWGHGHRGWWSSSSGSSERRRRHRHDRYSEEKHEPEAPACTRCPKLNIINYKNDPTM
ATIHLTAVYKYLLVVQSQGLSLGLGNKAMLECTNMKTWTPIQVSGADIDAVGCVPAEE
EVNLKNLKELASKKQKRHVVEEEADQSEPDVHDATVKSTNVSEETEEEEEHELKQVSP
EKH"
assembly_gap 85323..85422
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 86342..86441
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 87003..87610
/estimated_length=608
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(87972..88646)
/locus_tag="NECAME_01078"
mRNA complement(join(87972..88098,88618..88646))
/locus_tag="NECAME_01078"
/product="hypothetical protein"
CDS complement(join(87972..88098,88618..88646))
/locus_tag="NECAME_01078"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68968.1"
/translation="MPFREELRTIWCARDIDDNNVNFRTVRCVIEGQGPYPNHTEPAP
IPQPIAE"
assembly_gap 90045..90571
/estimated_length=527
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(<90677..91537)
/locus_tag="NECAME_01079"
mRNA complement(join(<90677..90775,90848..90985,91493..91537))
/locus_tag="NECAME_01079"
/product="hypothetical protein"
CDS complement(join(<90677..90775,90848..90985,91493..91537))
/locus_tag="NECAME_01079"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68969.1"
/translation="MKGRCQCQCQCRWEEVVATATEEEVDFLVVDLVEGHLRVSQNPS
RNHSNKAKVNLEIILEEDLDDVNEGISIIPEHLHATDLLVKIPVYVIKCF"
assembly_gap 93748..94024
/estimated_length=277
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(96150..104731)
/locus_tag="NECAME_01080"
mRNA complement(join(96150..96305,96421..96557,104578..104731))
/locus_tag="NECAME_01080"
/product="Transthyretin-like family protein"
CDS complement(join(96150..96305,96421..96557,104578..104731))
/locus_tag="NECAME_01080"
/inference="protein motif:HMMPfam:IPR001534"
/codon_start=1
/product="Transthyretin-like family protein"
/protein_id="ETN68970.1"
/db_xref="InterPro:IPR001534"
/translation="MDGCMRCVLEGPPRGSPAIREVTSSWVGRRQRYLSICLIRRSPS
DRVDNSPDGDKDDLLDEVRTEENGEFYLKGGTYEETPIEPALKIYHDCDHKHKACKRR
VYWILPSRYINNGTVTEWMDVGSINMEINFGNEERDCRHRRHHHRH"
assembly_gap 96823..98154
/estimated_length=1332
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 99891..101131
/estimated_length=1241
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 102972..103071
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 108130..108231
/estimated_length=102
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 111101..123219
/locus_tag="NECAME_01081"
mRNA join(111101..111161,112707..112775,113338..113534,
114512..114673,115897..116042,117073..117146,
117210..117271,117363..117428,117950..118415,
118767..118832,119436..119497,119556..119665,
119792..119936,120273..120410,121848..121981,
123204..123219)
/locus_tag="NECAME_01081"
/product="MH2 domain protein"
CDS join(111101..111161,112707..112775,113338..113534,
114512..114673,115897..116042,117073..117146,
117210..117271,117363..117428,117950..118415,
118767..118832,119436..119497,119556..119665,
119792..119936,120273..120410,121848..121981,
123204..123219)
/locus_tag="NECAME_01081"
/inference="protein motif:HMMPfam:IPR001132"
/inference="protein motif:HMMPfam:IPR003619"
/codon_start=1
/product="MH2 domain protein"
/protein_id="ETN68971.1"
/db_xref="InterPro:IPR001132"
/db_xref="InterPro:IPR003619"
/translation="MDDIIFEAVRQCDPDPISHDELRSASAAPSQPPLTPSPASFDTG
GERAVASPFSDSTSSIAKTSAEQTNRRGRSNTENRSGSNTTHSLARPSASDACTTIVA
YLMQFNKSADEEFSRKAIESLTKKLKDKRDELDALIACCGSEGKEADKCVTIARTLDG
RLQVCVNPYHCERIMNPTLNNLSNLDLASLKLERSPSESTDTDVDRLTALYRDFRPEG
AWNSIAPFGQPHQKISPQAPNTFGTAYPHPHAPPWAQKSMTAPSVDLSNNHAFAMPDK
AVLPSQMLPPHTLLQQHQKQAQPDFSHLRLFDGSFQTNRPTPSDSTQVANAQQAFYHQ
HKPPQNHPMQLHPSTSLQSSQSSHLQQISPLQTAFSDTTLGRPHPQLHLPLQPSRSPK
NTVQVQRTAQLQDGQMATNLKMSDEKEKLLSRPIPGQPYGNLLNAEFVLGNKLKVNSF
EPPSCSVDSNWGCFVYYEREVQIGLLQVKHSDMYIDGGFGQASNRYCLGRENNPLREQ
DCHLVRQTIGDGIRLSFKENGDVWVQVYTGRAIFVHSHYLDRESGRGTGDVVHKIFDL
NNAKAILRQHMLACQTAKEYLAGQRTPMDDLFHMYKKDKLDEEAKKGADDMKRFCVAR
ISFVKGWGPDYNRKSISECPCWIEVKMNSRLIA"
assembly_gap 113660..113759
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 115662..115761
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 125705..126654
/estimated_length=950
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 139276..140557
/locus_tag="NECAME_01082"
mRNA join(139276..139289,139409..139525,139907..139986,
140196..140252,140391..140557)
/locus_tag="NECAME_01082"
/product="hypothetical protein"
CDS join(139276..139289,139409..139525,139907..139986,
140196..140252,140391..140557)
/locus_tag="NECAME_01082"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68972.1"
/translation="MDFTETPEMDVALIVVIAFCILLLPTIFFVICRLHMRMRKKAHK
KASRVSVVSIAPVSSRKKSSISLPPIRHVPPQNRTSNDLSMVEVPDPDVSGLVVLQNN
RRVSACYLTELKLMDIGPLPRDQAVLEEEREREKEKRESLAL"
assembly_gap 141600..141699
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 142453..142552
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 143780..143879
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 144482..144725
/estimated_length=244
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 145316..145830
/estimated_length=515
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 146422..146521
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 153818..158684
/locus_tag="NECAME_01083"
mRNA join(153818..153928,155903..156059,156647..156743,
158208..158329,158578..158684)
/locus_tag="NECAME_01083"
/product="RHO protein GDP dissociation inhibitor"
CDS join(153818..153928,155903..156059,156647..156743,
158208..158329,158578..158684)
/locus_tag="NECAME_01083"
/inference="protein motif:HMMPfam:IPR000406"
/note="KEGG: bmy:Bm1_39260 Rho GDP-dissociation inhibitor
2; K12462 Rho GDP-dissociation inhibitor 1.7e-55"
/codon_start=1
/product="RHO protein GDP dissociation inhibitor"
/protein_id="ETN68973.1"
/db_xref="InterPro:IPR000406"
/translation="MTDFASGDNVDDESEKSESQYRAPEKKSVVEILNADQDDESLAK
YKATLLGASPVDTVVDPMDPRIVIVKSITLLVPGRDDVKMELDNAGALGDATFKLKEG
CHYRLRFDFYVQREIVTGLKYIHKVSRHGVQVLKETFMVGSYAPKQELQSYTTPVEEA
PSGMLHRGKYKVKSQMTDDDGHDWLTWCWTTEISKDW"
assembly_gap 154620..154719
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 157221..157320
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(160788..168674)
/locus_tag="NECAME_01084"
mRNA complement(join(160788..160904,160974..161062,
161209..161391,161464..161611,161667..161768,
162262..162396,167160..167391,168065..168152,
168545..168674))
/locus_tag="NECAME_01084"
/product="hypothetical protein"
CDS complement(join(160788..160904,160974..161062,
161209..161391,161464..161611,161667..161768,
162262..162396,167160..167391,168065..168152,
168545..168674))
/locus_tag="NECAME_01084"
/inference="protein motif:HMMPfam:IPR002014"
/inference="protein motif:HMMPfam:IPR004152"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68974.1"
/db_xref="InterPro:IPR002014"
/db_xref="InterPro:IPR004152"
/translation="MSNVSEQVSKTMESAKEAAAKVGEQVSDFFQGNPFSTPVGRKIE
LATNASILATENWGLNMEICDFVNNTEDGAKDAVRAIRKRLHTNMCKNNAIVMYTLTV
LETCVKNCGHNFHVLVCSKDFVQDLVKLIGSKFDTPQIIHERVLALIQAWADAFRNQP
DLQGVVQVYEELVSKGVTFPATDLDAMAPILTPKQSYEVVSQPDGPITASAEQLAKLR
SDLDVVNSNLKVFREMLTEIVPGRETTDELQLLNELHSTCKQMQLRVLDLIRSVGNEE
VTYELLVMNDEFNSVFEKYDRFMTNRSGDATGDASGGSAQPATADLIDVGQSGKSLEE
QLAGMKVTSASSAEAYAANSEQQAQVGIATAINNKGNVTDIEAQEMEKWLAAQGQKGE
KIIKAPYDTDMNTKF"
gene 171650..174440
/locus_tag="NECAME_01085"
mRNA join(171650..171739,172144..172221,172311..172616,
173056..173862,174240..174440)
/locus_tag="NECAME_01085"
/product="protein disulfide-isomerase domain protein"
CDS join(171650..171739,172144..172221,172311..172616,
173056..173862,174240..174440)
/locus_tag="NECAME_01085"
/inference="protein motif:HMMPfam:IPR013766"
/inference="protein motif:HMMTigr:IPR005788"
/inference="protein motif:HMMTigr:IPR005792"
/note="KEGG: cbr:CBG14484 Cbr-pdi-2; C. briggsae CBR-PDI-2
protein; K09580 protein disulfide-isomerase A1 3.3e-224"
/codon_start=1
/product="protein disulfide-isomerase domain protein"
/protein_id="ETN68975.1"
/db_xref="InterPro:IPR005788"
/db_xref="InterPro:IPR005792"
/db_xref="InterPro:IPR013766"
/translation="MFKLACLCLFALSAFAATVEEEENVIVLTKDNFDEVINGHEFVL
AEFYAPWCGHCKALAPEYAKAATQLKDEGSAIKLAKLDATVHGDVASKFEVRGYPTLK
LFRNGKPSEYTGGRDAASIIAWLKKKTGPVAKTLKTADDVKSLQEEADVVVVAYFKNV
EGEKAKIFLEVAGGIDDIPFGITSDDAAKKQLELKDEGIVLLKKFDEGRAVFDEKLTA
DALKTWIQANRLALVSEFTQETASVIFGGEIKSHNLLFVSKESSEFEKLESEFKNAAK
QFKGKILFVYINTDVEDNARIMEFFGLKKDDLPAVRLISLEEDMTKYKPDFAEITTEN
IAKFTQSYLDGALKPHLMSEEIPEDWDKAPVKVLVGKNFDQVARDNTKNVLVEFYAPW
CGHCKQLAPTWDKLGEKYADHENIVIAKMDATANEVEDVKVQSFPTIKFFPAGSNKVI
DYTGDRTLEGFTKFLESGGKEGAGPSEDEKAAEEAEEETHTEL"
assembly_gap 173986..174085
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 175572..176037
/estimated_length=466
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(177469..188012)
/locus_tag="NECAME_01086"
mRNA complement(join(177469..177630,177732..177809,
177862..177984,178927..179049,179216..179348,
179538..179631,179681..179783,181476..181631,
181709..181815,182019..182199,182577..182660,
182753..182863,183550..183678,183774..183902,
183970..184076,184185..184263,184323..184454,
186730..186792,186873..187024,187078..187261,
187980..188012))
/locus_tag="NECAME_01086"
/product="6-phosphofructokinase"
CDS complement(join(177469..177630,177732..177809,
177862..177984,178927..179049,179216..179348,
179538..179631,179681..179783,181476..181631,
181709..181815,182019..182199,182577..182660,
182753..182863,183550..183678,183774..183902,
183970..184076,184185..184263,184323..184454,
186730..186792,186873..187024,187078..187261,
187980..188012))
/locus_tag="NECAME_01086"
/inference="protein motif:HMMPfam:IPR000023"
/inference="protein motif:HMMTigr:IPR009161"
/note="KEGG: cbr:CBG02020 Hypothetical protein CBG02020;
K00850 6-phosphofructokinase 0."
/codon_start=1
/product="6-phosphofructokinase"
/protein_id="ETN68976.1"
/db_xref="InterPro:IPR000023"
/db_xref="InterPro:IPR009161"
/translation="MSEPEKRVHHQEMDGQGEGAGPLPDIPAASLKRNIRRLDSIVPT
AGKEGADIQFNLYKGRGVAVFTSGGDSQGMNSAVRSVVRMGIYLGCKVYFINEGYQGM
VDGGDNIVEANWNSVSDIIQKGGTIIGSARCSDFRKREGRLKAAYNLIEKGITNLVCI
GGDGSLTGANQFRKDWPGLIKELVETKKITPETAANHPNIQIVGLVGSIDNDFCGTDM
TIGTDSALQRIIESIDAVVATAQSHQRSFVVEVMGRHCGYLALVAGLASEADFCFIPE
WPPPVNWREILCKKLQEMRAEGQRLNIIIVAEGAIDRDGTPISAELVKDVVAKTLNYD
TRVTVLGHVQRGGAPSAFDRLLGCRMGAEAVLALMEMNEESEPCVISIDGNQMVRVPL
MQCVERTQAVQKAMNAKDWELAVKLRGRSFQRNLETYKLLTKLRTVEKDNLSGGQNFN
VAVMNVGAPAGGMNAAVRSFVRMALYHHCTVFGVEDSFEGLANGAFKKFQWGDVTNWV
MHGGSFLGTQKQLPNEKNVPLIAEQLRKHNIQALLLVGGFEAYHSTLILSKNRDKYPE
FCIPMCVIPCTISNNVPGTSISLGSDTAINEICTMIDKIKQSATGTKRRVFIIETMGG
YCGYLATLSALASGADNAYIFEEKFTVEDIIEDVEVIAAKMAQGVQRYLIVRNEYANK
NFTTEFVKQLFAEEGKGEFSTRINILGHAQQGGSPTPFDRNMGTKLAARALEYIITQI
KDSMVNGVVMTKSPETATLLGLTGRRVVFTPVEELASETDFDKRLPCDQWWLKLRPLL
RILAKHTSIYHTEAMEETEDFD"
assembly_gap 183269..183368
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 184527..184896
/estimated_length=370
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 190791..190890
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 192568..192732
/estimated_length=165
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(192858..195091)
/locus_tag="NECAME_01087"
mRNA complement(join(192858..193022,193283..193421,
193471..193583,193988..194132,194192..194278,
195075..195091))
/locus_tag="NECAME_01087"
/product="hypothetical protein"
CDS complement(join(192858..193022,193283..193421,
193471..193583,193988..194132,194192..194278,
195075..195091))
/locus_tag="NECAME_01087"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68977.1"
/translation="MAFHIRYDARRSDTKYVKAVATALRFMGKMGFWECHITAKVYDE
IIKEEGESFCRHILPEELQKIKEKSKAPKLGKETKKDDITRMQRSVEVLQALQAAHFI
DIYQRSPLVGNALPLTQQIVDDYQGSKEYASGNLDPLFVDGSMLSFDEDVKVFDIDPE
VMGSNEIVQWDGDSGMASSGCDTTDASLGSEAPVDDSEVAPPNANVSDGDANEEEVQL
MHE"
gene complement(<197564..199099)
/locus_tag="NECAME_01088"
mRNA complement(join(<197564..197759,198156..198652,
198705..198767,198857..198985,199082..199099))
/locus_tag="NECAME_01088"
/product="hypothetical protein"
CDS complement(join(<197564..197759,198156..198652,
198705..198767,198857..198985,199082..199099))
/locus_tag="NECAME_01088"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68978.1"
/translation="MVINLEGIKQECEDVEENQSANDVTHDDTSLRDTYHAGKPSRKR
RPLSRPKKIRPRAGRRTGERVTSDEELPSEATGPTKSMSSPHNFCDDEIQSDKPNECD
VDDFNAEETHNDDFPLFEEKCEVPSERSSAETDKGSPTDGLYIDEEAPVDERIERNLG
QNRSQVREIPIRQKEVKDEPASADDNSDTVVSKPNYDTTETGKEIIDENQDSGLLLQH
QYRRKFMDHTIDPSIGYRYRMWSHAYRTFRTNPFIVPPARGQVPQLVRYPRRPVREVR
SVTRDDKCYVKLGVKYEVAVSNPPK"
gene complement(199399..200533)
/locus_tag="NECAME_01089"
mRNA complement(join(199399..199418,199572..199640,
199701..199737,200170..200219,200284..200352,
200416..200533))
/locus_tag="NECAME_01089"
/product="hypothetical protein"
CDS complement(join(199399..199418,199572..199640,
199701..199737,200170..200219,200284..200352,
200416..200533))
/locus_tag="NECAME_01089"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68979.1"
/translation="MGKNISNMDAMATWPTKIDGTPSGEDDDAEASVTHHIWKKKHRR
GEPVVKTSYVRRQGTPVTCTIKLRDRSRLTPCWNELHNGIVPRRNRERRKSCNSAPPA
PAVCQHPQRATKKIEISD"
assembly_gap 203204..203303
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 205689..217595
/locus_tag="NECAME_01090"
mRNA join(205689..205820,206201..206443,206585..206699,
206758..206974,207039..207156,208948..209052,
209123..209211,209290..209398,209703..209786,
209839..209979,210129..210261,212070..212262,
212697..212868,212958..213102,213188..213234,
214501..214662,214718..214822,214883..215000,
215181..215662,215719..215850,215909..215976,
216154..216253,216326..216426,216553..216664,
216760..216879,217248..217431,217495..217595)
/locus_tag="NECAME_01090"
/product="MATH domain protein"
CDS join(205689..205820,206201..206443,206585..206699,
206758..206974,207039..207156,208948..209052,
209123..209211,209290..209398,209703..209786,
209839..209979,210129..210261,212070..212262,
212697..212868,212958..213102,213188..213234,
214501..214662,214718..214822,214883..215000,
215181..215662,215719..215850,215909..215976,
216154..216253,216326..216426,216553..216664,
216760..216879,217248..217431,217495..217595)
/locus_tag="NECAME_01090"
/inference="protein motif:HMMPfam:IPR001394"
/inference="protein motif:HMMPfam:IPR002083"
/note="KEGG: xla:100158365 usp7; ubiquitin specific
peptidase 7 (herpes virus-associated); K11838 ubiquitin
carboxyl-terminal hydrolase 7 8.6e-154"
/codon_start=1
/product="MATH domain protein"
/protein_id="ETN68980.1"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR002083"
/translation="MPATIRRPLSDEDEEGPSSVNLHYFYDDYDINSDDDIFSDAVIE
TIAARDPFEYEMENGVDEKGQTPGKESVEKGVSEKDTTDMEIESKTVPNKEAFELKND
HEADVENRDMDVDNRDTDVENVEVDMVEDSASEEDDACTPPDAAMDVNVSCDDECAEP
IKKCRSLLVEDMPRCESDYMTEEEDDPDDLYKPEGTIYLDIDGFSQFCKGSPETQQRL
SKPVFVRGLPWKILAIPRDAARVGTGTRPNKALGFFLQCNGDSDAVAWNCIASASLKV
LGQIEGFEDHSRRITHTFYPKENDWGYSQFLTCDHLINPENGFIKDDTIRLVVHVSAD
APHGVQWDSKKHAGYIGLKNQGATCYMNSILQTLYFTTKLRKAVYDMPVSQDDSENNV
ALAMQRVFYDLQHSDRPVGTKKLTKSFGWDSLETFMQHDVQELCRVLLDNLESKMKKS
PVEDTIPNLFRGVMKSYIRCTNVSFESSKEEPFYDIQLNIKGKNNIMQSFREYVQVER
LDGENKYDAGDYGMQPAEKGVKFVTFPPVLHLQLMRFQYDATLDANVKINDKFAFPDK
LCLNEFVEGNGEDYTYCLHAVLVHSGDFHGGHYVVFINTGLRPPGEKYKPKWCKFDDD
VVSRATVREAVMANYGGDDGESTGRTYTNAYMLVYVRQTCIDDVLCQNENLQVPAHLM
VTDEHLASYNGFDLVDPKLLDDTGLPREKIEKGMTIPQLYDYVKHKLFSSDDDIPARE
MFRIWKFEETTYKDEGSIMSALPRLRPTSLIPHSEETQEKTLEAVLENDRNLLYIETT
ASSSLRSYNENYSFLAEMLMFLKYYDEESRSLRYVGHFIVAYRQCMSAYTSECLKLIG
LPEGTPLRFYEVCSLHKDAHLRCLLFCFQEVAPDRIRLIESLGKPLCADNTVVEVSDG
GLLIAERADRTNEANNAKLHLDTLYNTIDIEAVANNDSFVSSHAEVDPPITGTIGLNW
TMRQLVDYIGKEINYDPAKILLWRVSPFNDRATQFLTDAQCKVLRVNGLLGLAGAQLH
DPRRNKRYRVVYTKMPIPIADMERKRQMKIQMMDEKMNITEITIFPEKTGTVRDILEE
ARREFKFAANGTGKLRLVYVGQSSQSMRAYMIFKEETSVMEVFQKTMTPSMYMGRVEE
VPQDQLVVRSNEYLVPIAHFDKDPGRMFGVPFFLKVANDELLSSVRERIQSRLEIPDK
EYEKYKFALISSSRVVRYLDMTSNGRVNLAELGHAHVASLATSPYLGLDHMNKSRGAR
GSHAAEKAIVIHN"
assembly_gap 210834..210933
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 213324..213705
/estimated_length=382
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 219321..219420
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 220817..224293
/locus_tag="NECAME_01091"
mRNA join(220817..220945,221017..221100,221181..221408,
221470..221560,221619..221801,221864..222100,
222164..222277,222556..222759,223449..223533,
223591..223676,223739..223884,224168..224293)
/locus_tag="NECAME_01091"
/product="hypothetical protein"
CDS join(220817..220945,221017..221100,221181..221408,
221470..221560,221619..221801,221864..222100,
222164..222277,222556..222759,223449..223533,
223591..223676,223739..223884,224168..224293)
/locus_tag="NECAME_01091"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68981.1"
/translation="MQSCLIVAVIGLLATQAFAQDDPTQPVVIRLQPMSSRPRFLSEV
SAPRAVHPPVVPPAPASAPVIAPAVQQPLPPSPPAAQQPVFQQTAPPGSQQFVPRTGA
SVPPPPPVTIPPDVQNQLIKFFGLDSFGIPGLTGNHPNGFAGAVQELRAAGIPVQGLP
AEHLNGNAVSHAAPTQSADILAQANPKFQDQLTQLVNEARNSGPYEGNGGHIPLPADK
PGENGLIGLLSNSIRKLVKETGVSDALSQSLPSLLGSGHSSSSAARHGAAGAAASVDG
PAISQSVDENAITNQIRGKDIRRQPSTAQRALSGISSFLGGGGGNTPTHAGLPRIPGI
PLLPGGIPRNAQGQIDVVNLIGSITRRLSNGTTLADMLPPEQLQTLADNVTDALLPET
PADFDLSKFMGRWFEGINSPRATEQRCVVHHYGGLTKNDKTATFTALKIYREGSEFGP
VRYSIGYAFRGGNKDAMLQLHTSESSDAQPFWIYKLGPEGKDPFGNPQYEYAIVSNWV
RYPVTVLVRDPDTFKAKYQTEVLRWLEDQGFINGFIRAFNLLQPSGYSSCQYADSTFE
VFGK"
gene 225490..227765
/locus_tag="NECAME_01092"
mRNA join(225490..225600,225744..225807,225910..226104,
226135..226271,226688..226854,227627..227765)
/locus_tag="NECAME_01092"
/product="hypothetical protein"
CDS join(225490..225600,225744..225807,225910..226104,
226135..226271,226688..226854,227627..227765)
/locus_tag="NECAME_01092"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68982.1"
/translation="MDLNTITGIIGGIGRMLETSVDTINVPSELIMGRWFQMYKAAIN
FDVFRTQMFCPVAYFSPNPIMGEDGFSMEEAYRTMSKAGPIETYKRDMNKVGPGQYWM
YTEEYFYPRQCENIGQVYYNIIYIIAAGPAFDNETRKADEPLQYIVVTDANRLSLMVY
SRDPHIFFQKIYILTVFFQQKYNKDVLEFMEKKGFGGRVFWNSPRPIYQGPDCEWPSE
KEVFARRVLKNQELAERSKNGTAEPAMSGMPLADMLRDPKKTLERLVGTQGH"
gene 228050..231955
/locus_tag="NECAME_01093"
mRNA join(228050..228478,229425..229715,229774..229893,
229962..230159,230583..230706,230985..231103,
231818..231955)
/locus_tag="NECAME_01093"
/product="hypothetical protein"
CDS join(228050..228478,229425..229715,229774..229893,
229962..230159,230583..230706,230985..231103,
231818..231955)
/locus_tag="NECAME_01093"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68983.1"
/translation="MQWLCALVGAVAVISPATCQNDAFALPQAPRFAPKPTVPPEYSS
FFELDGHARELVDSLLGPRPGGLFPEKAYEIGAPSEPVSNNKPVHVPSTLERTLEQFF
TAPEPASGQALPPGFGSGFALLNNNKPVTSFGSGNTRRAPEVPEGGFLPAEIRRAPQS
VSNVASSVDDDGDEGNDDDEVVTRVIYSGLKWKRTKQFQFGGLSEESSTSSGGLIGTI
FNLISMTQKKAAESKNGKSAVEDKNALGKAVSNLIGGENSPLPAKNMISNVLYKALTS
NSVQPNDTLAEHPELPSLTNLTLTPAQSAAITENLEMVQNFIIQPSSPLCTHKPEPVG
FELQSFMGQWYQIFEYTTDGTPYGKPKISSGYAMIKSPGELIYRTTSNQEDVNVHVLY
LGPLNSNNEYEYVIMSTNCNFPLYVFARDPVVYKQRYESDVNAVLERKGLVNGISRLL
NIVAPVESSLCTFPPSLFNIQG"
gene 234003..235820
/locus_tag="NECAME_01094"
mRNA join(234003..234128,234421..234564,234626..234808,
234867..234979,235054..235163,235231..235315,
235368..235450,235505..235663,235723..235820)
/locus_tag="NECAME_01094"
/product="hypothetical protein"
CDS join(234003..234128,234421..234564,234626..234808,
234867..234979,235054..235163,235231..235315,
235368..235450,235505..235663,235723..235820)
/locus_tag="NECAME_01094"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68984.1"
/translation="MRCFVALVFTLLVVVVVVVRTAPVQEAPTFESFSNDAPLTKQSN
VNGVATAKPDLVKVGEVAETILSRLGFSTRDDKNVRRAPVPSALYQTDDLNAVIAEAN
ANRVDLQGIASGQIPGLAPIPVPGYPGPQDVPVIPGVNTIPGLSNFNYLVGQLFPQMI
PPANTLLGSSISRILPKDSAKNLAKDVFRAVHPAAENVDVARMMGRWFTVINSPHVIR
EACTVLHFGALTNNTYSASFTTLKFYREGNPNGSPRYALGYGFKSGETGQFVLHNSNS
PDAEPFWVIKKGPLNEYNQYDYAIISTWVRFPVFVIARDPERFRKEHMKNVLQFLEDN
NYINVMTKAFNMISPVDYEACQYTPTFSGAGK"
gene complement(236250..242398)
/locus_tag="NECAME_01095"
mRNA complement(join(236250..236403,237589..237755,
237854..237952,238011..238121,239171..239232,
242086..242186,242340..242398))
/locus_tag="NECAME_01095"
/product="Ras family protein"
CDS complement(join(236250..236403,237589..237755,
237854..237952,238011..238121,239171..239232,
242086..242186,242340..242398))
/locus_tag="NECAME_01095"
/inference="protein motif:HMMPfam:IPR013753"
/note="KEGG: hsa:51655 RASD1, AGS1, DEXRAS1, MGC:26290;
RAS, dexamethasone-induced 1; K07843 RAS,
dexamethasone-induced 1 2.4e-06"
/codon_start=1
/product="Ras family protein"
/protein_id="ETN68985.1"
/db_xref="InterPro:IPR013753"
/translation="MPISKTVIYRRLRISTGKQRKLYKIKSEVYQLDIIDCSGNDPFP
AARKLSYISGDMFLLVSSVDNADSVAHMLDIRQQISDCKASRGAAGGGDTPCVFVLNK
ADLPEHRWQTTEKEVGEQIEQVTGSQDAFVVCSAANNLNIDKAFAKLFTLNKCPKHMN
PEVHKMLRNELSADVETGRRHILRRMRSRFSREQEDSLVTYTDLNARRPSLRTDLLIN
RAKTSVIHQRFNINEQSPQRVRRQEGGRCVIM"
assembly_gap 238772..239157
/estimated_length=386
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 239878..240432
/estimated_length=555
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 245280..245379
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 246488..246812
/estimated_length=325
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 249158..249904
/estimated_length=747
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 251288..251387
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 252029..252128
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 253196..253871
/estimated_length=676
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 255901..256682
/estimated_length=782
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(258773..259103)
/locus_tag="NECAME_01096"
mRNA complement(join(258773..258850,258898..259017,
259101..259103))
/locus_tag="NECAME_01096"
/product="hypothetical protein"
CDS complement(join(258773..258850,258898..259017,
259101..259103))
/locus_tag="NECAME_01096"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68986.1"
/translation="MKASVRLEDKGSLELSGVTPKAPVPTAYLMLCVLPLDDIHEVDL
DFSLTYTQQFERSITGNIVLPL"
gene complement(<259673..267498)
/locus_tag="NECAME_01097"
mRNA complement(join(<259673..259775,259829..259950,
261301..261461,261855..261942,263518..263628,
264754..264906,265029..265147,265301..265379,
265506..265577,265743..265868,266702..266785,
267317..267396,267453..267498))
/locus_tag="NECAME_01097"
/product="VHS domain protein"
CDS complement(join(<259673..259775,259829..259950,
261301..261461,261855..261942,263518..263628,
264754..264906,265029..265147,265301..265379,
265506..265577,265743..265868,266702..266785,
267317..267396,267453..267498))
/locus_tag="NECAME_01097"
/inference="protein motif:HMMPfam:IPR002014"
/inference="protein motif:HMMPfam:IPR004152"
/codon_start=1
/product="VHS domain protein"
/protein_id="ETN68987.1"
/db_xref="InterPro:IPR002014"
/db_xref="InterPro:IPR004152"
/translation="MVDHNAGEKPIEYWISRSTDPFIDEETRKQNVQKLCDRVNYEAD
GAMVATGILAHRIVSPDQDEALYSLQAVDQLVRKCGEKVHNRVGKFRFLNQLVKLITP
KYLGAQTSPEVKELAIKLLYSWQKSMRHVEKFKEVYDSLREHHLITADPIIPEEEIMI
VQSNPPKLAVFEDEEKARLLKELLKSTNPDDLQAANRLIQTLEDQKIERRHKRADELE
QVRQLCKRLEDAMMEKTAEELGITPDIIYTEAKMKTLADELMAVRPHLFRFASDATEN
DEEALAEILAVNDQVNQLIQKYRNFSQTGRVRQHNGGSSEEAADLLGPEPNDSVTGPT
SSTVPLDFNADALLKQKFSKEVPSSSSEFADVPFIGFDRSMTPALPRKVKPPSQPATS
VLDDLTTLIDGDLFSKQPPSQTFKNIKPTLNDLCTSSSVSNVSISPLDNLNRSTFE"
assembly_gap 262482..263134
/estimated_length=653
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(270844..278922)
/locus_tag="NECAME_01098"
mRNA complement(join(270844..270965,271026..271080,
271151..271255,271313..271421,271628..271750,
271809..271883,272267..272373,272444..272617,
272702..272815,272929..273076,273144..273226,
273297..273458,273522..273632,273694..273747,
273816..273988,274058..274168,274755..274977,
278845..278922))
/locus_tag="NECAME_01098"
/product="sulfate permease"
CDS complement(join(270844..270965,271026..271080,
271151..271255,271313..271421,271628..271750,
271809..271883,272267..272373,272444..272617,
272702..272815,272929..273076,273144..273226,
273297..273458,273522..273632,273694..273747,
273816..273988,274058..274168,274755..274977,
278845..278922))
/locus_tag="NECAME_01098"
/inference="protein motif:HMMPfam:IPR002645"
/inference="protein motif:HMMPfam:IPR011547"
/inference="protein motif:HMMTigr:IPR001902"
/codon_start=1
/product="sulfate permease"
/protein_id="ETN68988.1"
/db_xref="InterPro:IPR001902"
/db_xref="InterPro:IPR002645"
/db_xref="InterPro:IPR011547"
/translation="MAILGDSCDENENACEGYYDRVPKNQCIFDEEFGLLRHTTRKTF
TKNKLAKMRHAKKYFHPRILLDFFPILKWLPHYDIKTSLLNDIIGGLTVGIMHVPQGM
AYASLAGAQPVNGLYTSLFPALFYMFFGTSRHISLGVFAVVSLMAGSCNQRVSNILER
KADNGSLISEFDDEMKIDTSIAILTSLTLCVGLIQIAMAVLRLDFLTALLSDQIISGF
TTGAAVHVFTAQLNKILGVPLPRRSGAGKLFFVYKDLLDSIIAGYVNWFTFSISMGTI
TTLFLIKSYLDPHIRKRCRMPIPYDLFVMIIGTVVSAVANLRERFKVKVIGHIPTGMP
SPSFPDVSLFGYVLGDALAIAVVSLVVTVSMGKLFAKKHNYEIDIRQEFYAMGFMEVL
CSLFPVWPSSTALARTLVYEAAGTKTQLATVFSSLLLLAVIFYIGPFVEVLPVCFLSC
IIIVALKGMFMQLQNIKTLWPISKADCAIFIVSFVATVLYDVVEGLMIGVCFAAALLI
YAILSAKVVEIGRLSHNEGHTYFQPIEKYRDAAISDGVCCVRFSAPLVYLNAEHFKKS
VEEIVRLPTLERRRRKGENEREKSLRSSRNESGTTLRSIKVVTPDDLQKKQSVVETKH
IPINAIVIDLSTVPYVDVTGANCLIEIFNEQQKKGVSVFFAAAPLEVLERLQCALGST
DKDILSHFYPSIDDALDNINSPQTKN"
assembly_gap 274298..274547
/estimated_length=250
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 276404..276940
/estimated_length=537
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 286893..286992
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(287388..291395)
/locus_tag="NECAME_01099"
mRNA complement(join(287388..287546,287666..287812,
287908..287978,288137..288241,289122..289209,
289617..289732,290035..290207,291060..291126,
291189..291241,291304..291395))
/locus_tag="NECAME_01099"
/product="ribose-phosphate diphosphokinase"
CDS complement(join(287388..287546,287666..287812,
287908..287978,288137..288241,289122..289209,
289617..289732,290035..290207,291060..291126,
291189..291241,291304..291395))
/locus_tag="NECAME_01099"
/inference="protein motif:HMMTigr:IPR005946"
/codon_start=1
/product="ribose-phosphate diphosphokinase"
/protein_id="ETN68989.1"
/db_xref="InterPro:IPR005946"
/translation="MAALNYKTDDSSGMVLLSGNSHPELSRLVSDRLGIRQGEVIVYN
KTNRETSVDIKQSVRGKHVFILQSGSKNVNNDVMELLILIYACKTSMSKTITVMMPYL
PYSKQCRMLRRSSIPMKLIAEMICRAGASRLVSLDLYKKEIQGFFSIPVDNLRASPFL
LQYIKEYIPDYKNAIIVAKSPGVMNKATSYADRLRLGVAVIHGEQKDSEESGLEDGRQ
SPPPNYAPFELFPSQEPKQKPPLTVVGDVGGRIAIMVDDIIDDAQSFVAAAEVLKTRG
AYKIYVIATHGVLSSDAPALLEASPITQVIVTNTVPHEVQKMRCHKIKTVDISLMLCE
AVRRIYHNESMGQLFRDITLDD"
assembly_gap 289373..289486
/estimated_length=114
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(297429..307346)
/locus_tag="NECAME_01100"
mRNA complement(join(297429..297572,298257..298375,
307271..307346))
/locus_tag="NECAME_01100"
/product="hypothetical protein"
CDS complement(join(297429..297572,298257..298375,
307271..307346))
/locus_tag="NECAME_01100"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68990.1"
/translation="MLNVICKNLQMGPVRSILLISMCFTGILSISLLDAYRSEKQTAR
RRGMLNVRFRPIMHLRGDDDWRKQVGMETLTNQMMDENGIVFDLNPPANDHMSRIFAG
PTGRGSKISK"
assembly_gap 310976..311075
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 312123..312443
/estimated_length=321
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(326932..327287)
/locus_tag="NECAME_01101"
mRNA complement(join(326932..327161,327239..327287))
/locus_tag="NECAME_01101"
/product="hypothetical protein"
CDS complement(join(326932..327161,327239..327287))
/locus_tag="NECAME_01101"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68991.1"
/translation="MQITTVQAQNKQMINEVTFDETNTTHHEEHTKFHKKEEYRITAK
SEKKNRKITRKCSSRTPYGAGEVTNCNELHPPFPTLFIEKNHHDAIFA"
assembly_gap 328851..328950
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 330693..343471
/locus_tag="NECAME_01102"
mRNA join(330693..330829,330886..330991,331048..331134,
331209..331365,331507..331534,331605..331725,
332104..332196,332308..332470,334181..334324,
334378..334473,334533..334609,334691..334869,
335044..335165,335312..335536,335618..335737,
335796..335977,336102..336286,336345..336446,
336549..336630,336695..336787,336850..336981,
337237..337332,337393..337491,337669..337794,
337863..337982,338051..338250,338371..338502,
338612..338726,338798..338956,339225..339377,
339468..339590,339659..339775,339842..339931,
340466..340561,340631..340744,340868..341017,
341095..341231,341468..341537,341615..341779,
341874..342001,342069..342177,342231..342359,
342416..342520,342571..342852,342929..343089,
343192..343310,343425..343471)
/locus_tag="NECAME_01102"
/product="myosin head"
CDS join(330693..330829,330886..330991,331048..331134,
331209..331365,331507..331534,331605..331725,
332104..332196,332308..332470,334181..334324,
334378..334473,334533..334609,334691..334869,
335044..335165,335312..335536,335618..335737,
335796..335977,336102..336286,336345..336446,
336549..336630,336695..336787,336850..336981,
337237..337332,337393..337491,337669..337794,
337863..337982,338051..338250,338371..338502,
338612..338726,338798..338956,339225..339377,
339468..339590,339659..339775,339842..339931,
340466..340561,340631..340744,340868..341017,
341095..341231,341468..341537,341615..341779,
341874..342001,342069..342177,342231..342359,
342416..342520,342571..342852,342929..343089,
343192..343310,343425..343471)
/locus_tag="NECAME_01102"
/inference="protein motif:HMMPfam:IPR001609"
/inference="protein motif:HMMPfam:IPR002928"
/inference="protein motif:HMMPfam:IPR004009"
/note="KEGG: cel:F52B10.1 nmy-1; Non-muscle MYosin family
member (nmy-1); K10352 myosin heavy chain 0."
/codon_start=1
/product="myosin head"
/protein_id="ETN68992.1"
/db_xref="InterPro:IPR001609"
/db_xref="InterPro:IPR002928"
/db_xref="InterPro:IPR004009"
/translation="MEESDLRFLQVQRAAVADPARASEWAGKKLCWVPHEKDGFVAGS
IKQETNDEVIVEICDTGKTVTISKDDVQKANPPKFDKVEDMSELTYLNEASVLHNLKE
RYFSSLIYTYSGLFCVVINPYKRLPIYSESLIEEFKGKKRHEMPPHIFAIADSAYRSM
LQDREDQSILCTGESGAGKTENTKKVIQYLAHVAGATRSKGGPQAPAASPAKGELEHQ
LLQANPILEAFGNSKTVKNDNSSRFGKFIRINFDMSGYISGANIEFYLLEKSRTLRQA
PDERSFHIFYQFLRGTSAAEKANYLLEDIDKYRFLVNGNITLPNVDDAQEFQSTLKSM
RIMGFAEDEITSVLRVVSATVLMGNFEFTQEKKSDQAILPDDRVIQKVCHLLGLPVIE
LTKAFLRPRIKVGREFVNKAQNKEQAEFAVEAIAKASYERMFKWLVNRINKSLDRTRR
QGASFIGILDIAGFEIFELNSFEQLCINFTNEKLQQLFNNTMFIMEQEEYQREGIEWQ
FIDFGLDLQPTIDLIEKPMGLLALLDEQCLFPKATDKTLVEKLQKTHSKHPKFIVPDM
RAKSDFAVVHYAGRVDYSADQWLMKNMDPLNENVVALMQASTDPFVCGIWKDAEFAGI
CAAEMNETAFGVRAKKGMFRTVSQLHKEQLTRLMTTLRNTSPHFVRCIIPNHEKKAGK
INSMLVLEQLRCNGVLEGIRICRQGFPNRVPFQEFRHRYEILTPNVIPRGFMDGKEAV
KKMIEYLEVDSNLYRIGQSKVFFRTGVLAHLEEERDLKLTDLIIQFQAQCRAFLARRL
YVKRMQQSSAIRVLQRNGLAWMKLRNWQWWRLFTKVKPLLQVTNQEAAISAKEDELRA
IREKLDKVETEFKESLTKIDQVMAERNVLQDQLQQETDNNAELEEVKNRLQLKKNELE
EMVNEMRDRLVDEEQRTEKMSQEKKKLVETVRDLEEQLEQEEQARQKLQLDKANVDQR
VKNVEIKLVDITDAHDKLLKEKRILEDKMNQLNMQLSEEEERVKQVARQRGKVEGHVQ
ELEQELLRERQIKSELEQQKRKLITELEDSRELLEEKRGKLEELNGQLMKREEELSQV
LTRSDEEAATIALLQKQIRDMQATIDELREDIETERAARNKAEMARREVVAQLEKVKG
DMLDKVDETSVLQDIMRRKEDEVRDLKKALESTTHALENKLEEQKAKYNRQIEELHEK
IEQQKKVNSQQEKYKHQAENERAELTQELANIQAQKAEADKRRKQQEVQFLDMQSQLA
ECDEHRLQALEQLDKAREELEHISRTREDEEQLVSNLNRKVAALEVQLHEVSDQVQEE
TRAKLAQINRVRQLEEEKATIAEERDEIDAARQHMERDINVLRQQLTEARKKADEGVI
QQMEELRKKAQRDLENTQHQLEESEASKERLIQSKKKLQQELEDANIELENIRTASRE
MEKRQKKFDMQLAEERANVQKAILERDAHAQESRDRETRILSLVNELEQLKGTIDETE
RVRRMLQLELDESISSKDDVGKNVHELEKAKRQLEQTVQEQKATIEELEDQLGFAEDA
RLRLEVNIQALRAEQDRNLNAKDQEAEDKRRSLVKQLRDLEQELENERRSKAGAISQK
KKMEAHIAEIEQQLDVANRLKDEYNKQLKKNQQMIKEYQHDSEEARQMKEEIASQLRD
IERRLRSAEAENQRLSEANEMLTSQKRQLEQEKDELEELRGRGGSFSSEEKRRLEQKL
AQLEEELEEEQNNAEIAIDKQRKAQQQLEQLTTELSMERSVAQKSEAERQGLERQNRE
LKAKIAELESTAQSRARAQIAALEAKIQYLEEQNSVESQERHNATRQYRFVLSSCSYL
ALQSVMSTSIVLLRRIEKRLHDTILQLEDERRNVEQQKEIAEKCNLRAKQMRRQLDEQ
EEEMTRERAKSRNLQREIDDLTEANDTLTRENNSLRGGAARRNRENMRLRSAYQIPGS
SDNLTRNDDEDGSIGTEVTGSDHTDELKKTSV"
assembly_gap 354842..354941
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 356617..363280
/locus_tag="NECAME_01103"
mRNA join(356617..356682,357429..357542,357605..357712,
359415..359489,359742..359840,362873..362962,
363066..363152,363218..363280)
/locus_tag="NECAME_01103"
/product="tetraspanin family protein"
CDS join(356617..356682,357429..357542,357605..357712,
359415..359489,359742..359840,362873..362962,
363066..363152,363218..363280)
/locus_tag="NECAME_01103"
/inference="protein motif:HMMPfam:IPR018499"
/codon_start=1
/product="tetraspanin family protein"
/protein_id="ETN68993.1"
/db_xref="InterPro:IPR018499"
/translation="MVAGCGNKCVKYIFWAINFLFFLLGAAILGIALWLRFDNSFLTK
VISTIKIDINSLPLESFYWLLYVVIGFGGVLLILGFLGCCGSACELICAIGLYFLFVL
ILFVVEIVGIVLYFVNKASIRDNFVNLWRSELVSKYGSSQTIRDTLDNIQSQLHCCGA
SGCEDYIVYGQYPSSCQCTTNPSQTGCATYIWQILESNLIYVIIVAAIILLVELFAMI
FSCILMSAVKDKRNS"
assembly_gap 361174..361273
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(364611..370056)
/locus_tag="NECAME_01104"
mRNA complement(join(364611..364704,364762..364850,
367570..367710,367765..367863,368875..369003,
369910..370056))
/locus_tag="NECAME_01104"
/product="Ras family protein"
CDS complement(join(364611..364704,364762..364850,
367570..367710,367765..367863,368875..369003,
369910..370056))
/locus_tag="NECAME_01104"
/inference="protein motif:HMMPfam:IPR013753"
/inference="protein motif:HMMTigr:IPR005225"
/codon_start=1
/product="Ras family protein"
/protein_id="ETN68994.1"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR013753"
/translation="MGEERYRLVVLGSAKVGKTNLIRRYLYNEFSEKYKETIEDLHSR
QFRIQGVPLPLDILDTNFNFPDMRKLSIASASAFLLVFAVDDVPSFKEMSDLWQEICE
RRPDINTLPIVVVGNKCDLPSKKIFEATARAFTSRLSADVRYLEVSAKCNLRVTDIFR
TLLELSGFPRCKIKPTKNGKEPLDRRPSDETCKLSRSASLIKRTKHLSLRMRRHGDKV
GDDEIVDESDCQIQ"
assembly_gap 365120..365219
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 377005..377189
/estimated_length=185
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 382536..382635
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 383384..383954
/estimated_length=571
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 385729..385899
/estimated_length=171
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 386049..392694
/locus_tag="NECAME_01105"
mRNA join(386049..386102,387901..388039,388936..389035,
389579..389636,389715..389822,392560..392694)
/locus_tag="NECAME_01105"
/product="hypothetical protein"
CDS join(386049..386102,387901..388039,388936..389035,
389579..389636,389715..389822,392560..392694)
/locus_tag="NECAME_01105"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68995.1"
/translation="MLTMLLSLTMAMPAVTAKINDDHIRLDMCRTLLEDELCDQTMPI
HDGHYPVTKLNDRLIVRVNPGPHYGIHSEYLPYNCHVLKEGESTTEENAFVLGGCPHK
TNVAIYQSKVPVRIEFTMQDVLSEFRTQMSGDYIVKCIIGECSRKEGSAINKCPDYDH
CEKGEAWNPDILHVNIHQIPAYIKLRHYPMYRSAHRH"
assembly_gap 389145..389244
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 392298..392397
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(394348..405662)
/locus_tag="NECAME_01106"
mRNA complement(join(394348..394462,395726..395823,
395893..395949,396798..396977,397047..397142,
397210..397352,397864..398053,398128..398224,
398401..398561,398655..398717,398790..398921,
399462..399571,401248..401324,401754..401893,
403336..403464,403822..403953,404063..404212,
405600..405662))
/locus_tag="NECAME_01106"
/product="CRAL/TRIO domain protein"
CDS complement(join(394348..394462,395726..395823,
395893..395949,396798..396977,397047..397142,
397210..397352,397864..398053,398128..398224,
398401..398561,398655..398717,398790..398921,
399462..399571,401248..401324,401754..401893,
403336..403464,403822..403953,404063..404212,
405600..405662))
/locus_tag="NECAME_01106"
/inference="protein motif:HMMPfam:IPR001251"
/inference="protein motif:HMMPfam:IPR006797"
/inference="protein motif:HMMPfam:IPR008273"
/codon_start=1
/product="CRAL/TRIO domain protein"
/protein_id="ETN68996.1"
/db_xref="InterPro:IPR001251"
/db_xref="InterPro:IPR006797"
/db_xref="InterPro:IPR008273"
/translation="MVQTYQSPVRVYKHPFELVMAAYEKRFPTCPQIPIFVGSEVTYE
YNSEDGAEWVIERKCQLNVDAPYLVKKIAGVDYVYFTQKNSLDRRKRTLLIEASNISF
SSRIVVKENCHYYVHPDNPDWTCFEQNAALDVKSFFGFEAAVEKLAVKQYAANLAKGK
EILEYFIDELIKSGVTYIPQFEDKDTGSTTDSAIDVSKEQADEETHVVLRRESKAHPD
PQALKNSTSFDDSESKLEAEYIRRFLGQLSPLEESRLCELKYGLQAHHKGKLPNDAHL
LRFLRARDFDVAKAKDMVHNSIIWRKQHSVDRILQEWSPPAVMTQFFPGCWHHCDKEG
RPLYLLRLGNLDMKGLLRSCGLENIVKLTLSVCEEGLIKTAEATKQIGAPISTWSLLV
DLEGLSMRHLWRPGVQSLLRIIEIVEAHYPETMGQVLIVRAPRVFPVLWTLISPFIDD
NTRNKFMINGGETVKEEISKYIDDQYIPDFLGGTCLANCPTGGHIPKSQYRPVEELPD
EADVLSSMYTTASVTRGYPVEVVVPIASSGCVLTWDFDILKSDCEFVVYHTPKVIQEA
AIPHSPTMMNPVEMVTAAIANNPLPVILSDPSLTLGPDLTIEEKPVVFQEGDSMQGSH
FCSRSGTYILQWRTPEIPGQHNSTFDFSIGSHKCKLMYYHELLDSADFRGSVASLESC
RSSFSSIAPPSNPGTPSSLARNKVNPKN"
assembly_gap 408674..408773
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 412485..413330
/estimated_length=846
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 415065..415164
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 418809..419780
/estimated_length=972
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(422707..425862)
/locus_tag="NECAME_01107"
mRNA complement(join(422707..422818,423208..423330,
423587..423698,424355..424421,424478..424715,
424771..425037,425726..425862))
/locus_tag="NECAME_01107"
/product="leucine Rich repeat-containing domain protein"
CDS complement(join(422707..422818,423208..423330,
423587..423698,424355..424421,424478..424715,
424771..425037,425726..425862))
/locus_tag="NECAME_01107"
/codon_start=1
/product="leucine Rich repeat-containing domain protein"
/protein_id="ETN68997.1"
/translation="MQLEGVPKRRPLTGEEYDPLQIRRLNLSKNNLVHVACLPAFANL
VSLDVSNNGLSFFPEDIGKMVHLRSLVARNNLIEELPKSMTSLENMETLYLSGNRFET
VPPVLFSMHRLRVLHLGGNRIENVPYAIGTLLSRLVVDDANAVSHDPKNQSLYRLEIL
YLGGNLLKEVPATIGRLQRLSSLSLCDNQLETIPSTFGELRNLESLSLHNNVLKTLPT
EIVKLRNLQQLSLRNNPLVHHFVHNMQLEPPKLKELAGRIVRLKMSRLPIKEVLPREL
IAYLNSANQCVNPKCKGVYFEACVEHVKFVDFCGKYRVPSPKCSAATPAYVSSESSSD
SDDDVPKNMKMKKILLG"
assembly_gap 424134..424233
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(425932..426114)
/locus_tag="NECAME_01108"
mRNA complement(425932..426114)
/locus_tag="NECAME_01108"
/product="hypothetical protein"
CDS complement(425932..426114)
/locus_tag="NECAME_01108"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN68998.1"
/translation="MVGGDIGGATCATRDVAAPATPHYRAGGGRERCCRRPNHTMLRT
TPPIFLNSLEGPHYAI"
assembly_gap 428577..428817
/estimated_length=241
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(430587..436307)
/locus_tag="NECAME_01109"
mRNA complement(join(430587..430697,431048..431133,
431480..431652,431762..431856,431917..432112,
432727..432814,432887..432962,433137..433244,
433325..433465,434646..434745,435323..435469,
435531..435624,435693..435812,436223..436307))
/locus_tag="NECAME_01109"
/product="HAD superfamily hydrolase, 5'-nucleotidase"
CDS complement(join(430587..430697,431048..431133,
431480..431652,431762..431856,431917..432112,
432727..432814,432887..432962,433137..433244,
433325..433465,434646..434745,435323..435469,
435531..435624,435693..435812,436223..436307))
/locus_tag="NECAME_01109"
/inference="protein motif:HMMPfam:IPR008380"
/inference="protein motif:HMMTigr:IPR008380"
/note="KEGG: cbr:CBG02038 Hypothetical protein CBG02038;
K01081 5'-nucleotidase 2.2e-204"
/codon_start=1
/product="HAD superfamily hydrolase, 5'-nucleotidase"
/protein_id="ETN68999.1"
/db_xref="InterPro:IPR008380"
/translation="MSLRVFVNRSLRMEKINFFGFDMDYTLVQYRSPDLEILAFELAI
ERLIDMGYPEEIRKFKYDPIFPVRGLWFDYAYGNLLKVDGFGNILVGMHGFKFLKTSE
IEEIYPNKYLQLSESRVFVLNTLFNLPETHLLAYLIDYFDSHTDYTLLDDKTGLLGGD
VLVSYKSIFHDCRSAVDWVHLESDMKEMIMGNMEKYVVQDDRACLLLRQLREAGRQTF
LLTNSDYRYTDKMMSFLLGDDWRSYFNICVVDAKKPKWFAEGTVFREVDTNTGAVKLG
IHTGPLKEGVVYSGGSSDAFHKIVKARGKDVLYIGDHIFGDVLRSKKSRGWRTFLVIP
ELDHELTVWTDRRPLFEQLNQLDNTLADIYKHLDATSRNKPQIHTVLQKVKSLAHEMD
QEYGVLGSLFRAGSRTTFFASQVERYADLYASSCYNLVHYPSFYFFRAAMQLMPHEST
VDHSSVLKSSKTDLLKRQESVGQQVRGWTKKTANENEFCHEEEEDEQSISDGEPGPRL
RSKSLSDDAAEEEVADTDVVGVPPAFVDQQQ"
assembly_gap 433583..433682
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 438477..438576
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 439142..439241
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 443725..445187
/estimated_length=1463
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene <451107..453473
/locus_tag="NECAME_01110"
mRNA join(<451107..451204,451498..451655,452406..452540,
452631..452753,452821..452903,452977..453063,
453161..453262,453345..453473)
/locus_tag="NECAME_01110"
/product="hypothetical protein"
CDS join(<451107..451204,451498..451655,452406..452540,
452631..452753,452821..452903,452977..453063,
453161..453262,453345..453473)
/locus_tag="NECAME_01110"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69000.1"
/translation="SFVRELSHFGLQYADSEHSPFTSHHGTSWIRPRICGCVAFIAVL
FVNTTHALELLTDYSDGHSHSHGAEEHDDHDSEGNGFGFVPKQYVIVSIFDVALKCLV
LALGHIPSMGLHPIPRLILHTLSPTIVIGMYVAGLAIPPWLGESWFWKHIDPVVAVIT
TILFFFLIIPAFKEMMPYIFADTPAKFHVESFQNEISTTFPDVTCTHIHAYRLWPGNL
FEALIHLSFLVDKSKSGWSEEASTRYSEVSQNVTSVLTRAGAQKVVVEPSFLDATEIG
RPWIGCVGTTCFRQNRGCCKMDDGRATV"
assembly_gap 451680..451779
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(455442..464732)
/locus_tag="NECAME_01111"
mRNA complement(join(455442..455620,455694..455805,
455988..456119,456193..456334,456553..456637,
458017..458102,458172..458288,458395..458521,
458645..458789,458854..458935,459008..459138,
459346..459516,461306..461468,462806..462884,
463101..463259,463361..463450,463694..463786,
463848..463911,463984..464100,464169..464255,
464562..464732))
/locus_tag="NECAME_01111"
/product="kinase domain protein"
CDS complement(join(455442..455620,455694..455805,
455988..456119,456193..456334,456553..456637,
458017..458102,458172..458288,458395..458521,
458645..458789,458854..458935,459008..459138,
459346..459516,461306..461468,462806..462884,
463101..463259,463361..463450,463694..463786,
463848..463911,463984..464100,464169..464255,
464562..464732))
/locus_tag="NECAME_01111"
/inference="protein motif:HMMPfam:IPR017442"
/codon_start=1
/product="kinase domain protein"
/protein_id="ETN69001.1"
/db_xref="InterPro:IPR017442"
/translation="MGVACGRALYAAARRTSSTERDPLCEGEDLIGLLYHRYGWEPES
AAREGGLLRRSDPVGLYQVGKAIGRGNFATVRLAKHEIAKTKVALKVVNRAALDEENL
IRLEREMRILTRINHPHIVKLYEIMRTETTIYIVTEYCSGGELFEILIERGRTAEDEA
RRWFGQTASAVAYLHHKDFGFSNTQAPSQLLRTWCGSPPYAAPELLLGKEYDGLKADI
WSLGVILYILVTGGFPFPGDNVENLKRAVLSCQMKIPYWVSVECADLIKKMLVFNPFK
RCNINSVMQHRWLTNCQSAKTHLLVKNSMLASATCLPERRSFKLNPTILLFMQQHGRW
TEEQIVEQSNLEEGDLPGTTDDHPRRGSRGSILSGKANVEPEPITPTISAHHLAQLNL
STSFECDSDDSSASDICDDSPSSSSRNRAQGRCQFGLAMKEEQGNRNEHRRHTLCASE
QILSPDMMAQLPIGSPLHQAALNHSALTDLALHSGNACVMTSPQLPLFPGVPLLPILD
YTRMLPVPNSERRASAGENLLNPGAIENLNHLVQPAPPSGTAAGSVEEEGEGYLNKYA
GKRNTVHGASSPFGPSSPVPRHSPYTKASSSERRSSWASPAITAQQHQQLERLYRQAI
SGSGGNDLMGIQALQKEFQRLGQIAAQGCSPTASRSPTHFFDHRTAPFGCPRISITDE
HNRSLAPGSSSFDPVNLFEQKVNEMVFGQRPATVIGFASTSKSGTSSPEQNVKIDDKD
NMDDRVKSFVSTLPLVDVVQELKNCLNEMQIRFEETNEVVYMDQEMRRLSLSTGVEIG
CATLPPEQKSHVEFAIVAGDSPTSELLCDELISRLRVLDPAASSE"
gene complement(466392..468478)
/locus_tag="NECAME_01112"
mRNA complement(join(466392..466637,467742..467906,
467998..468091,468156..468283,468359..468478))
/locus_tag="NECAME_01112"
/product="zinc finger, C2H2 type"
CDS complement(join(466392..466637,467742..467906,
467998..468091,468156..468283,468359..468478))
/locus_tag="NECAME_01112"
/codon_start=1
/product="zinc finger, C2H2 type"
/protein_id="ETN69002.1"
/translation="MRSKMIRCKRCKNRFIERNIYERHLRDKHPEDYTIYIQEQEAEM
EQQRQEEIEANRIEELQTGGFIPPESEIEASSFDVDVEGIPLPGENNGGVAPRFDQYG
RLKQLKRPYKKKISPQCPFCDKRFRNEYSLKKHFVKKHSELVEFKQCTRCYKCVKDGE
EMENHLCELVMTHERIHTGMIKFECRICDYKANRFVQMDEHCKNEHGYICSICQEKTA
EWSDMKHHTLVKHGGYLATEQSAGEDFNMSLN"
gene complement(472101..476446)
/locus_tag="NECAME_01113"
mRNA complement(join(472101..472157,474046..474144,
474196..474282,474350..474460,474564..474602,
475195..475322,476153..476240,476408..476446))
/locus_tag="NECAME_01113"
/product="O-methyltransferase"
CDS complement(join(472101..472157,474046..474144,
474196..474282,474350..474460,474564..474602,
475195..475322,476153..476240,476408..476446))
/locus_tag="NECAME_01113"
/inference="protein motif:HMMPfam:IPR002935"
/codon_start=1
/product="O-methyltransferase"
/protein_id="ETN69003.1"
/db_xref="InterPro:IPR002935"
/translation="MRFPIVFDLLDQKARKFTRPPPTVDPPTSAPSKGSLSSCHLCRV
FTGLGLLGIAEKVHSRGLIVAVEHPSYVHYWEEIGLKVAKICLVLHYPNNDLFHTGHG
YTSKIQLRSSEPIEKALSKLAANDWDNFDFVFLDDLKRENYLDDYEHAVRLLRSNGLL
VINQALNNGGVLTSVELMTENDRVISSMNARIKEDGRVRASLLPFGGGTWIIVKK"
assembly_gap 473338..473468
/estimated_length=131
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 477725..477885
/estimated_length=161
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 481105..482973
/locus_tag="NECAME_01114"
mRNA join(481105..481316,481568..482235,482759..482973)
/locus_tag="NECAME_01114"
/product="hypothetical protein"
CDS join(481105..481316,481568..482235,482759..482973)
/locus_tag="NECAME_01114"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69004.1"
/translation="MEFRPEYGRPPPEFYRGVDYPDYREFREADYRDWPRHDFTQQRA
RSHSRLDPEYIPSDFPTYGRPLDKSLRSKSLDHRDAFRDDPALFDDRRGVNIPIYRER
NERNYDYERDLYTPFVRKEDRRDGMLEATGRNAYSRDVDIPMKRMPRALTRSTEWLAR
RNYDDRPRNPRDLSRTEGYSPKSASSSKRHNLNISVDPGRGRREYGRSEEFLGYGRDD
GREMYRDESRHIEGDVRGGGNSHKRQAHSSYHYESHSGGGAGFGSPSRRAITQQPMHG
PAQPAAAPGTYQPIRHHRLRQHCHTSPLPPIWCCFNEECLNLLFVFQLYIVYHNASAT
HVYRLEKANKRNVLFIKFIEVNISNILTQY"
gene complement(<484079..490435)
/locus_tag="NECAME_01115"
mRNA complement(join(<484079..484172,484248..484319,
484413..484483,484545..484737,484904..485059,
485124..485225,485282..485393,485975..486155,
486216..486294,486354..486478,486546..486662,
488504..488656,488716..488841,489398..489588,
489969..490060,490329..490435))
/locus_tag="NECAME_01115"
/product="hypothetical protein"
CDS complement(join(<484079..484172,484248..484319,
484413..484483,484545..484737,484904..485059,
485124..485225,485282..485393,485975..486155,
486216..486294,486354..486478,486546..486662,
488504..488656,488716..488841,489398..489588,
489969..490060,490329..490435))
/locus_tag="NECAME_01115"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69005.1"
/translation="MLLSSVFPATPNGTSLSDAGFVLLSLKDQILVDNSRLSSTWTVM
RTITEKFISKSDDLFVCGKIISEVLFFRSQHFCQEFISRPLNGVELLSKVVMVLQGIV
NSNQPPPSKISNLLSRNNSNTNRKRKAALLSGKYLKENAWRRFLDSANGLDAVLYSVN
SPQLDSKCYALEILLLLLDQPQGFVILMRALTTLAARSRDYVRFTMFVAQLKHGLHTN
KLHIQILIVRLFNKLLATAPSSTHRSLVRSEVALTKFSVEYVENLINTQSVPLGGMEI
LVEELALWRSLGTPPQPTYGVEHNHIYGLTETESDTLQSERIRHGRPPTGKYPTGSTV
LKNVERQRFKKQSGMGSGGRSSAPGYHPEGDRHTSNAFYPDRRSLTLSNRTWQAQSDA
SYSPPSLTRASYTTERGTPGGMRRAKSESAMLGPERVESPEGIRRGLKRFNAHEQQLY
HPIQHTRAISRSVHDLSTRDDAVTSTLTRPNSARPSSAARPQSRTLTRRAPTPPGHSP
TRFGSRLQVEESPPRARYASPSSPRARFAEPPIVEAQVPHAGFSYLFPSQPVVSSVLP
KRTITPDPHSRQSIIRSQSPASRLMSPSPRPDYDTRSYAENGQVVYIPINVDNGRHEK
LSRYDRADAGVYSTESRTSSRAKVRSPSINGVI"
assembly_gap 487361..487460
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(497227..504746)
/locus_tag="NECAME_01116"
mRNA complement(join(497227..497303,497423..497557,
499225..499316,500550..500692,501466..501606,
502178..502262,502320..502467,502700..502844,
504552..504746))
/locus_tag="NECAME_01116"
/product="hypothetical protein"
CDS complement(join(497227..497303,497423..497557,
499225..499316,500550..500692,501466..501606,
502178..502262,502320..502467,502700..502844,
504552..504746))
/locus_tag="NECAME_01116"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69006.1"
/translation="MRPPGVSVPSAHPGGRRGQSARPVLRAPSSMWSSTILLSLSSVF
GIIGLALVLAAALTDNWTEYQVNRREVINAFNREPELNVRLKDAFVRNVNYFSRNYGL
FQICFPDSVPSDIGSFSKYGSPCIDNTDYFPVEAVQENYSSQQTQRLYFMRANVATYV
LGGIVYVRAAECMHAVLHVTSFTVRIQLLTLTHLVLRFPIFSLISVLLFAVSMACWHY
VNYLERAVLEMAPFYKSWEPILKSTTRFNFGWSLVVAWVGILFILFASVFFICSASRL
KVREFFDKKNGMRAPRKVARNCALAAMLSPRGFLDPGLTQDVVCTLCFSLQKEEEKAL
SAKHGAYMMNNYYDKGAMVPYGYNTYAGYGNYPYGYGGQYSNGYYGYMTYGR"
assembly_gap 499100..499199
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(509849..515427)
/locus_tag="NECAME_01117"
mRNA complement(join(509849..509912,510351..510485,
510554..510650,510703..510817,511037..511097,
511198..511281,511381..511485,511932..512071,
512130..512287,512580..512718,512797..512927,
513002..513158,513261..513367,515364..515427))
/locus_tag="NECAME_01117"
/product="DHHC zinc finger domain protein"
CDS complement(join(509849..509912,510351..510485,
510554..510650,510703..510817,511037..511097,
511198..511281,511381..511485,511932..512071,
512130..512287,512580..512718,512797..512927,
513002..513158,513261..513367,515364..515427))
/locus_tag="NECAME_01117"
/inference="protein motif:HMMPfam:IPR001594"
/inference="protein motif:HMMPfam:IPR002110"
/codon_start=1
/product="DHHC zinc finger domain protein"
/protein_id="ETN69007.1"
/db_xref="InterPro:IPR001594"
/db_xref="InterPro:IPR002110"
/translation="MDPREAAQYGNVERLQELLDSGASLKNYYVIGAITPDWTDSDDC
SLLHWAAINNRLHVAELLLRRRANVNAVGGVLASTPLHWAARQGHVLMVAFLVTNGAQ
VEKRDVEGFTPLHVAAQFGATPVVGYLIARGQSVDAPDESRITPAMWAAAKCPHVDPL
QLLITLGADVNKADAAYHNTPLHWAATNANVTAVNTLLKADCDLSATNRDNETALDIA
VRRGDTLLISRMELAARRKGLMNSTWRQKLTEDKTTSRRILWCVPFVIYFCICLILHL
NTSLSIKLAYLLLTAIICKYFPLYMQITFSLLIFILPFTFFTVSYSDPGYISTNYQER
CKTIINISEGKCPSVAFCPTCLLMKPARSKHCRYCDRCVARFDHHCPWVNNCIAANNH
RSFICYLLIIAVSTALFCSAVILCGSIVDWRDICGPHTLEDVMMCDHWLIFAFIVGAA
VCGWSTTMAVMQLYQILLEVTTNERLNIHRYSNFQVGTNQLDIRSPYNKGMCRNFYDF
FCGDRQDENG"
assembly_gap 513934..514400
/estimated_length=467
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 516164..516263
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 530613..532346
/estimated_length=1734
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 532980..533319
/estimated_length=340
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 537129..542769
/locus_tag="NECAME_01118"
mRNA join(537129..537287,537349..537526,537622..537707,
537774..537880,537943..538054,538340..538484,
538541..538626,538746..538847,538899..539005,
539062..539137,542133..542272,542329..542398,
542450..542548,542644..542769)
/locus_tag="NECAME_01118"
/product="hypothetical protein"
CDS join(537129..537287,537349..537526,537622..537707,
537774..537880,537943..538054,538340..538484,
538541..538626,538746..538847,538899..539005,
539062..539137,542133..542272,542329..542398,
542450..542548,542644..542769)
/locus_tag="NECAME_01118"
/inference="protein motif:HMMPfam:IPR009539"
/note="KEGG: bmy:Bm1_38130 hypothetical protein; K04510
vang-like 2.1e-144"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69008.1"
/db_xref="InterPro:IPR009539"
/translation="MSTVSAGGRRGPPKDFRAAPRGDLRLMKPRGRGYSQSDVGEPFI
PRFSAIASEGVKIGLPPEEYGENTTVLTGVTSEHSYNGDDRPVYEPPMGRVMSRRSAE
FHFYAVQNLSVALISAPLMCLLPFAMTYSIYHYPQITCEVDCQGYLLLIAIKTLLLIV
ALWALYWRRAAADLPRLYFARAALSFFVLFILFAFWLFYTVRIFLEKHSNYTYVVTYA
LSLLDALLYTHYISVIVLELRRLRPEYIVTMVRDPDGESKTMSIGMMSLQEAAIQVLR
FHESYFPSYNVFLDKARQSSHRLRNSSQPPGFKVYDIEGLGSGTTEISQSNLRALMEA
TSRRRSTNHNDILQEECEWERRIKKRKYRLIASTEEAFAQVQSIVDNQAGNKNLCDAM
DSTTAAQGVFACIMRPLNKYLRQTRQQPRHPAEAVTHHIERCLSMRLNYRTFLQRFFS
DRFPAKDIVSESKWSIISDEQASASIQHGTTFLLRSHNKDDDAGVQLLCTISSLPFFN
LTEQSRSSNNKFALKIRNESSV"
gene complement(543768..544822)
/locus_tag="NECAME_01119"
mRNA complement(join(543768..543893,544295..544465,
544526..544583,544719..544822))
/locus_tag="NECAME_01119"
/product="hypothetical protein"
CDS complement(join(543768..543893,544295..544465,
544526..544583,544719..544822))
/locus_tag="NECAME_01119"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69009.1"
/translation="MLSDPTYVEELQDLLNSKVDILDLEALKYDDEMTRWNKMRKIHF
MLMKKPKEIRSQFKTRMRIRQSMHDEFIESRLSRTDNPVIKDFWNQINSLDANWSISE
GEAAEQEFQKFYYSQEETHEVRVSDERGAGSIGMELWSKLQYNPKIMKMD"
gene 546151..546843
/locus_tag="NECAME_01120"
mRNA join(546151..546299,546442..546499,546565..546735,
546793..546843)
/locus_tag="NECAME_01120"
/product="hypothetical protein"
CDS join(546151..546299,546442..546499,546565..546735,
546793..546843)
/locus_tag="NECAME_01120"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69010.1"
/translation="MKVFILILAVAIAGSLAFDPVFVDELEDLVPNKQDERELEALDD
DDEMIRSTKKEKLDAILARQSEFIQKRFKIEVEREKRRHQEKIEKKIAKAKDPQIKEF
WKKIEEIDNDMSLSENDADIKEWELKSKLTPQQRKTLEKD"
assembly_gap 552745..552844
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 554464..559016
/locus_tag="NECAME_01121"
mRNA join(554464..554481,554730..554810,554866..555021,
555130..555212,555272..555434,555622..555696,
555845..555912,555964..556093,556159..556266,
556319..556413,556669..556766,557129..557217,
557449..557509,557574..557659,557719..557861,
558068..558150,558208..558328,558446..558531,
558589..558652,558711..558810,558867..559016)
/locus_tag="NECAME_01121"
/product="peptidase family M13"
CDS join(554464..554481,554730..554810,554866..555021,
555130..555212,555272..555434,555622..555696,
555845..555912,555964..556093,556159..556266,
556319..556413,556669..556766,557129..557217,
557449..557509,557574..557659,557719..557861,
558068..558150,558208..558328,558446..558531,
558589..558652,558711..558810,558867..559016)
/locus_tag="NECAME_01121"
/inference="protein motif:HMMPfam:IPR008753"
/inference="protein motif:HMMPfam:IPR018497"
/codon_start=1
/product="peptidase family M13"
/protein_id="ETN69011.1"
/db_xref="InterPro:IPR008753"
/db_xref="InterPro:IPR018497"
/translation="MRYSYQEAAAFIISGLDQNVDPCDDFYAFSCNTYLKNHNVTELE
INRIGTYKEAQEDVNADIVDALEPVAVNDARFSETERIVKAALFACVHHSRARLPIDN
SRDVLIEMRDLLGAIPFLNHTLNKNVDFFTAMGKLEQEHAMGTLLGAMVSVDFSDVTR
HALYISQPYLPLPRDFYVLPQHTKRLQNRVELVSQDIVKLEMQIAMATWPDSEMRNYA
LQNNPFTLKELEKAYPSIKWKNYFTALLSSVGNLDINTVPFIVTQPSYFAWLNALFAG
EAVDRNTIANYLLLNLIFEDADFLGGNFKREVQKSDYVKYSFRRGRGVTRVGRQFGRL
YDETIADANMECLNNLMHYMPNGPGYVYVKSKKNREEVAKDVQEQTERVIKHFLRMIT
ELDWMSEESHAAARQKAENLVQNYGWPKDLYGDFSNSATIDRYHKKDYGEILDLFNAN
NTHNYYKIRKVMIKGYSNLESLKMLKEKPKRQGLIYEYPQAYNYAGQGGTGGHELVHG
FDDQGVQFGHDGKLTGCTWLECGWMDSTSKNGFRDMAQCVVTQYSTQCCPEKSGTIQC
ANGMTTQGENIADVGGQLAAYRAYREYIEEKGEEEKRLPGLEQYTPNQIFWLTYGFSW
CMSQTENSLVTQLLVDPHAPGSCRVNQVMQDIPDFGRDFGCTMGQNMYPPAEQRCPVW
VAE"
gene 561099..565270
/locus_tag="NECAME_01122"
mRNA join(561099..561169,561532..561574,561980..562037,
562759..563138,564051..564206,565193..565270)
/locus_tag="NECAME_01122"
/product="hypothetical protein"
CDS join(561099..561169,561532..561574,561980..562037,
562759..563138,564051..564206,565193..565270)
/locus_tag="NECAME_01122"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69012.1"
/translation="MFAFVSRTNSDLDVTLEMSRSGSMTASHKVTTKQHVKNIRRFPL
VLISMTKLLVSTAGLTGVVAALFITSLVFSILTWTRVKNDNDNPPRPKEPLSRPVVQL
SSSIQTTVTENVVTEPIVTVPTVSRTRVSAKTISPRSSATTSTRTLRTLTTPKFVATE
AAPRRNRTIMCPNYGVSDNSYAYQFLKDHKAEEHGVSRYGAIKELQDAVNTEIVDALF
DVDVNDKKRSETERITKAIALLTQYRHRGTIPASPRLRLPHLA"
gene 565336..566304
/locus_tag="NECAME_01123"
mRNA join(565336..565548,565683..565832,565935..566002,
566058..566193,566224..566304)
/locus_tag="NECAME_01123"
/product="hypothetical protein"
CDS join(565336..565548,565683..565832,565935..566002,
566058..566193,566224..566304)
/locus_tag="NECAME_01123"
/inference="protein motif:HMMPfam:IPR008753"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69013.1"
/db_xref="InterPro:IPR008753"
/translation="MFKNSFQKDSYGKCLHRFGGIPFLNHTLKEDFDVFAAMGEVEQN
HAMGTLFSAMVSVDYKKIKQNSLFLSQPRLPMPREFYVLPQFTMKLKKRGLQIADVLK
KFAEKILEEPDKYRDMIEKAAQDVVELERRIALASWADAEMRNYAQQYNPYDLPTLKK
AYPSVKWESYLRSLLSTVGPVDFSGPHKRRKFIRQISAHNLATVVFWVVECSLQW"
gene 570635..571329
/locus_tag="NECAME_01124"
mRNA join(570635..570692,570752..570968,571084..571185,
571239..571329)
/locus_tag="NECAME_01124"
/product="hypothetical protein"
CDS join(570635..570692,570752..570968,571084..571185,
571239..571329)
/locus_tag="NECAME_01124"
/inference="protein motif:HMMPfam:IPR018497"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69014.1"
/db_xref="InterPro:IPR018497"
/translation="MTSGLKWMSSDSKEKARQKAKGMVRNYGWPQKLFGDFKSSEEID
EYHKARRQQEMPLILKCFPPEHYRRIMLKSLSLPRRRGAAFDITVCAGSNFLLSPALV
SAWYQPERNSITFPYASFNPPYYSYEYPQAYNYGGQGGTAGHELVHGFDDQGK"
gene 571841..573292
/locus_tag="NECAME_01125"
mRNA join(571841..571880,572876..572939,572990..573089,
573143..573292)
/locus_tag="NECAME_01125"
/product="peptidase family M13"
CDS join(571841..571880,572876..572939,572990..573089,
573143..573292)
/locus_tag="NECAME_01125"
/inference="protein motif:HMMPfam:IPR018497"
/codon_start=1
/product="peptidase family M13"
/protein_id="ETN69015.1"
/db_xref="InterPro:IPR018497"
/translation="MTDNGPAIYNFPIGEHAAYIAYREYIKSLGHEEKRLPGLERYTP
NQIFWITYGYSWCRSVTEEYLISQLLTDPHAPSACRTNQVVQSIPAFGRDFGCSLGDR
MYPAPEQRCSVWVQE"
gene 577252..590107
/locus_tag="NECAME_01126"
mRNA join(577252..577632,582244..582324,583363..583590,
583649..583731,583790..583952,584032..584181,
584314..584389,585154..585305,585389..585527,
586428..586512,586578..586672,586742..586830,
586888..586948,587004..587089,587141..587268,
587484..587566,588443..588563,588752..588837,
589679..589742,589804..589903,589961..590107)
/locus_tag="NECAME_01126"
/product="peptidase family M13"
CDS join(577252..577632,582244..582324,583363..583590,
583649..583731,583790..583952,584032..584181,
584314..584389,585154..585305,585389..585527,
586428..586512,586578..586672,586742..586830,
586888..586948,587004..587089,587141..587268,
587484..587566,588443..588563,588752..588837,
589679..589742,589804..589903,589961..590107)
/locus_tag="NECAME_01126"
/inference="protein motif:HMMPfam:IPR008753"
/inference="protein motif:HMMPfam:IPR018497"
/codon_start=1
/product="peptidase family M13"
/protein_id="ETN69016.1"
/db_xref="InterPro:IPR008753"
/db_xref="InterPro:IPR018497"
/translation="MTKQANHIDFIAVAVVVAAAIVIASLVLNIIILTRVNTINNNVL
SPTPTPQPTVISNGTPQSTVITTAAGQATVITSAAPPQQPTVGTVPTPQPTVITNGTP
QPTVITNDTKFCPNVGPANTSPAYQQAATYLLNGLDQSVDPCVDFYAFTCNKAICKQK
SETRLSPPTLTLITTFQFIAQVNLTALDLNRLSTYDQAQEAVNTQIVKTLMPVDVNDD
KKWSATERITKAALDACVINSKLASSLDNSKQIYNDINTWFGGVPFLGGSLVKNASIW
AAVGTIEQTHALGTLLSSWVSVDYRNVSQNALYISQPSLPMPREFYVLPQFVDKLNNR
AQQIEAIMLSFASDVLSDPSPYAATIKQQWESHRRENSREKLIELDENLAKVEASHRI
FRNYDQQYNAYKLFNLTQAYPSIEWNDYLTNLLSSVENATDVVSNQVVLSQPSYFAWL
NAIFAGNTVDQNTVVNYIITQLLFVSQSMKFGETYFLGGSFKNVAVQADYVPYAQRRG
RGVTRIGRRHFRKFDDQDDPAVGCIDMLMNYMPYGPGYVYVKAQGNRDQVVKDITHQT
DLVISNFQKMIGTLDWMTPDSKAAAKYKSDHILKNYGWPSDMFGDFQNFTNVDDYHQL
DYFPIINAYNNNSTDYYTIFNLLKKGLENREAFRLLTEQADSIDYPQAYNYAGQGGTG
GHELTHGFDDEGVQFGWDGSLTNCTWNQCGWMDATSKTGFTGMAQCVVTQYSTQCCPE
KTGNVHCCNGATTQGENIADLGGQQAAYNAYQDYVKELGHDEMRLPGLEQFTPNQIFW
ITYGYSWCMKQSDKNLVNQLLTNPHAPGSCRTNQVMQDIPSFGKDFGCKQGSPMYPPP
DQRCKVWVG"
assembly_gap 579588..579752
/estimated_length=165
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 589444..589666
/estimated_length=223
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 591240..591339
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(591872..596051)
/locus_tag="NECAME_01127"
mRNA complement(join(591872..591991,592058..592200,
593764..593870,593925..593996,594088..594188,
594321..594419,595394..595463,595517..595648,
595939..596051))
/locus_tag="NECAME_01127"
/product="metallo-beta-lactamase domain protein"
CDS complement(join(591872..591991,592058..592200,
593764..593870,593925..593996,594088..594188,
594321..594419,595394..595463,595517..595648,
595939..596051))
/locus_tag="NECAME_01127"
/inference="protein motif:HMMPfam:IPR001279"
/codon_start=1
/product="metallo-beta-lactamase domain protein"
/protein_id="ETN69017.1"
/db_xref="InterPro:IPR001279"
/translation="MVLDTMTSYLNGVTAALRFAKDYAIAAAAYALASKAHKAMPTLT
SLDSVSRLSPLVIRILGQNPGPFTLQGTNTYLIGSGKKKILIDTGEPDIHEYVALLKS
TLEEDQSEIDSIIITHWHNDHVGGIPNVVKDVIGHEVPIYKIQRGTAEDPSQFHYVED
GHEVQVEGATLRFVQTPGHTCDHTSLWLNEEQTLFSGDCILGEGTTVFEDLHDYMKSL
EIIKGLHAKRIYPGHGPVVEKCDEKVDEYVKHRMIRENQIVEALISLGEASSMDITVL
VYKDAPLSVRLAALNNVRLHLNKLIKDGRVETAASGLYHLIH"
assembly_gap 592227..593424
/estimated_length=1198
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 597306..602374
/locus_tag="NECAME_01128"
mRNA join(597306..597350,597411..597524,598178..598318,
598373..598450,598513..598629,598687..598749,
598812..598886,599419..599529,599599..599724,
599781..599948,600016..600095,600146..600277,
600683..600788,601033..601134,601194..601292,
601352..601452,601544..601635,601916..601995,
602057..602197,602273..602374)
/locus_tag="NECAME_01128"
/product="Threonyl-tRNA synthetase, cytoplasmic family
protein"
CDS join(597306..597350,597411..597524,598178..598318,
598373..598450,598513..598629,598687..598749,
598812..598886,599419..599529,599599..599724,
599781..599948,600016..600095,600146..600277,
600683..600788,601033..601134,601194..601292,
601352..601452,601544..601635,601916..601995,
602057..602197,602273..602374)
/locus_tag="NECAME_01128"
/inference="protein motif:HMMPfam:IPR002314"
/inference="protein motif:HMMPfam:IPR004095"
/inference="protein motif:HMMPfam:IPR004154"
/inference="protein motif:HMMPfam:IPR012947"
/inference="protein motif:HMMTigr:IPR002320"
/note="KEGG: cbr:CBG03144 Cbr-trs-1; C. briggsae CBR-TRS-1
protein; K01868 threonyl-tRNA synthetase 0."
/codon_start=1
/product="Threonyl-tRNA synthetase, cytoplasmic family
protein"
/protein_id="ETN69018.1"
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR002320"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004154"
/db_xref="InterPro:IPR012947"
/translation="MVADDLKENIPNHKEIKVSKAPTEMTPWPDFIQRRIDMWDRLMA
EYKAEIAAKEPVPIKITLPDGKQFDADAWRTTPLHIAEKISKGLADTTIVAKVNGEVW
DLDRPFEKDSTLHLLKFDDDEAKQVFWHSSAHILGEAMERYCGGHLCYGPPIQEGFYY
DMWHDNCTISQEDFPKLDQIVKCAVKDKQPFERLEMSKEDLLEMFKYNEFKIRIIKEK
INTPKTTVYRCGPLIDLCRGPHVRHTGKVKALHITKSSSSYWEGKADAESLQRIYGIS
FPDPKQLKEWQKFQEEAAKRDHRKLGREHELFFFNPLSPGSAFWYPKGAHIYNTLINF
MRKEYRKRGFTEVITPNMFNSKLWETSGHWQHYSEDMFRFEVEKEQFGLKPMNCPGHC
LMYAHMPRTHNELPIRYADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRKDQIGDE
IRGCLDFLTFCYETVFGFTFKLNLATRPEGFLGEISTWNEAEADLKAVLDESGRQWGL
NEGDGAFYGPKIDITIQDALKRYHQCATIQLDFQLPQRFDLSYFDEKGEKQRPVMIHR
AILGSVERMTAILTENYGEGITVHESVNDYAKQVKNKLYGEGFEVEYDEGCPDTLNKQ
IRNAQLAQFNFILVVGAKEKENGTVNVRTRDNAVRGEVPLDALLAKFRRFAAEFTKDT
ESAEEFAA"
assembly_gap 601660..601759
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 602504..604344
/locus_tag="NECAME_01129"
mRNA join(602504..602509,604042..604200,604249..604344)
/locus_tag="NECAME_01129"
/product="hypothetical protein"
CDS join(602504..602509,604042..604200,604249..604344)
/locus_tag="NECAME_01129"
/inference="protein motif:HMMPfam:IPR002314"
/note="KEGG: bmy:Bm1_09350 threonyl-tRNA synthetase,
cytoplasmic; K01868 threonyl-tRNA synthetase 1.6e-31"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69019.1"
/db_xref="InterPro:IPR002314"
/translation="MGKSCDHRRIGCEQELYFFHPLSPGSAFWYPKGAHIYNKLVKFI
RNEYRRRGFNEVITPNIYNCKLWQISGHWEHYSDKIFKCCFC"
gene 606805..608263
/locus_tag="NECAME_01130"
mRNA join(606805..606870,606994..607029,607086..607172,
607429..607488,607543..607680,607771..607847,
608051..608147,608213..608263)
/locus_tag="NECAME_01130"
/product="hypothetical protein"
CDS join(606805..606870,606994..607029,607086..607172,
607429..607488,607543..607680,607771..607847,
608051..608147,608213..608263)
/locus_tag="NECAME_01130"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69020.1"
/translation="MFRLFLVTSILIVIIHAETTLEDRIEKGKERHKQVVGTLVNHIF
TSIEQRKEKEAAEREKLKELADQLKPYVDETKKRIKGEQELSEIDNALEEAQMHLAEE
GDANAEEKQAEIARIRDEVNKAKWGLMDRLQKILHGKYKPTVETMKKSEILNEITGTS
SWQSATWLLLFLCVLLSIALIAVLTHQMSKKSDYERLKNNSLM"
gene 611323..615525
/locus_tag="NECAME_01131"
mRNA join(611323..611406,611671..611732,611792..611903,
612149..612280,612620..612736,612782..612880,
612946..613083,613139..613234,613289..613363,
613455..613537,614235..614331,615107..615189,
615444..615525)
/locus_tag="NECAME_01131"
/product="hypothetical protein"
CDS join(611323..611406,611671..611732,611792..611903,
612149..612280,612620..612736,612782..612880,
612946..613083,613139..613234,613289..613363,
613455..613537,614235..614331,615107..615189,
615444..615525)
/locus_tag="NECAME_01131"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69021.1"
/translation="MRIAVTFCILAACIVTSSQNEDATSLIESLLDVDRALANEIKKD
ISQAKEKQEVLRDEFAKNLNDSVQRLKDALGERLDKLREIEQAYNLQDSEEKKKSLNE
WKNLLKGINETKVALEEEKEREMEQKKEDIRNLLNQLKMAYEKRKEEKAAEKEKEKEA
KPPSEQLDSQLRQAWQKAKEKLNQIQGKLNDSANAKEERRKEMLESMRSTLEEIKAIL
GQEKAARDQQRQQRHDAYENKVNQIKSDISSRKDDLDAREEELREKYAEYKQKQTELE
ESVQKALRDSVKASVVMELGDQLQNTLDKKALEKVLSQNQAKREEAMAAPKATVLDEI
TGVSAWQTVTWILLALCILLAVALIAMIIYQVSQRKKYHRLDGYDDERVPIAQPVMNP
GYTEEKKPSMPPTSSAPAVPYGETQQF"
assembly_gap 613658..613868
/estimated_length=211
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 619667..619810
/estimated_length=144
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 622206..622537
/locus_tag="NECAME_01132"
mRNA join(622206..622306,622378..622537)
/locus_tag="NECAME_01132"
/product="hypothetical protein"
CDS join(622206..622306,622378..622537)
/locus_tag="NECAME_01132"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69022.1"
/translation="MPTVSESVTAPEKERKQSDEMWQHVMPCLEISTRNFRHDRRPIT
PPPPGTRFSWPQVCGLLIRASVAIWCNQKHTSCLQFPSKVIC"
assembly_gap 623388..623487
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 626653..626752
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 627770..628831
/locus_tag="NECAME_01133"
mRNA join(627770..627985,628060..628705,628785..628831)
/locus_tag="NECAME_01133"
/product="nematode cuticle collagen domain protein"
CDS join(627770..627985,628060..628705,628785..628831)
/locus_tag="NECAME_01133"
/inference="protein motif:HMMPfam:IPR002486"
/inference="protein motif:HMMPfam:IPR008160"
/codon_start=1
/product="nematode cuticle collagen domain protein"
/protein_id="ETN69023.1"
/db_xref="InterPro:IPR002486"
/db_xref="InterPro:IPR008160"
/translation="MSSEKELEIEANSLRRVAFFGVAISTMATLVCVISVPMLYNYMQ
HMQSVMQSEVDFCKSRSGNIWREVTRTQVLAKVSGGALRSRRQAGYTSAGVEGSFDSA
PAGGCCGCGVSPAGPPGAPGPNGEDGADGQPGAPGKDGPDGPPATPAPPHDFCFDCPD
GPVGPPGNPGPKGPPGNPGADGQPGAPGQAGTPGPQGPPGPPGNDGQPGNPGAPGAPG
QLHEVPGPNGPPGPPGPQGPPGPDGQPGSDGQPGQPGPQGPPGDNGAAGAPGQPGANG
ENGPDGETGPAGGCDHCPPPRTAPGY"
assembly_gap 635642..635836
/estimated_length=195
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(<637656..638216)
/locus_tag="NECAME_01134"
mRNA complement(join(<637656..637733,637792..637916,
637976..638025,638131..638216))
/locus_tag="NECAME_01134"
/product="hypothetical protein"
CDS complement(join(<637656..637733,637792..637916,
637976..638025,638131..638216))
/locus_tag="NECAME_01134"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69024.1"
/translation="MVESATVGLLFHATLAEMVDHSQMSVEQRDSVAVIILTFVVVSL
IGYTLTVPCLCYGVQKHSATALVPYLVWRMLFSIIILIVVIWQVITSPKKPLLFRSAF
YDRQFPVAVSE"
assembly_gap 638624..638723
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 640757..640929
/estimated_length=173
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 645184..645283
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(646191..647545)
/locus_tag="NECAME_01135"
mRNA complement(join(646191..646372,646429..646699,
646773..647027,647110..647278,647490..647545))
/locus_tag="NECAME_01135"
/product="nematode cuticle collagen domain protein"
CDS complement(join(646191..646372,646429..646699,
646773..647027,647110..647278,647490..647545))
/locus_tag="NECAME_01135"
/inference="protein motif:HMMPfam:IPR002486"
/inference="protein motif:HMMPfam:IPR008160"
/codon_start=1
/product="nematode cuticle collagen domain protein"
/protein_id="ETN69025.1"
/db_xref="InterPro:IPR002486"
/db_xref="InterPro:IPR008160"
/translation="MGDKQSLLEMEKEANGLRRIAFFGVAVSTMATLVCIVSVPMMYN
YMQHMHTMMQNEINFCKMRSGNIWKEVTRTQVLAQVYPAQNSLSTRTHRQAGYGFDTS
SLAVEANTQTALCCGCGVSPMGPPGLPGSDGIDGEDGPAGLPGKDGPDAPPPIPQKEP
EWCFDCPEAPAGPPGSPGPKGPPGEPGIPGEKGVDGNRGLTGPVGPIGPPGEPGQPGK
AGPPGPPGKLNEVPGPEGPPGPPGPPGPQGLEGPAGRNGEPGPDGSPGDAGDRGAAGP
PGAPGKPGPTGPDGLAGPSGGCDHCPPPRTAPGY"
assembly_gap 648850..648949
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 652259..652358
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 653035..653214
/estimated_length=180
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(660748..665170)
/locus_tag="NECAME_01136"
mRNA complement(join(660748..660811,661865..662034,
662213..662331,662437..662498,663352..663408,
665118..665170))
/locus_tag="NECAME_01136"
/product="regulator of G protein signaling domain protein"
CDS complement(join(660748..660811,661865..662034,
662213..662331,662437..662498,663352..663408,
665118..665170))
/locus_tag="NECAME_01136"
/inference="protein motif:HMMPfam:IPR000342"
/codon_start=1
/product="regulator of G protein signaling domain protein"
/protein_id="ETN69026.1"
/db_xref="InterPro:IPR000342"
/translation="MLMKILICDCDFMGQNHSSTVGTEKKPSSSTTDNLDKPTYEVVY
AWSQSFENLMKNKLGQKYFAEFLKGEYSDENILFWQACEELKREKNAEKIEEKARIIY
EDFISILSPKEVSLDSRVREIVNTNMSRPSSTTFDEAQNQIYTLMQRDSYPRFLSSQL
YKNIIGNHGTLEEV"
assembly_gap 664391..664490
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 665586..665685
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 671677..671776
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(677038..677954)
/locus_tag="NECAME_01137"
mRNA complement(join(677038..677178,677246..677310,
677897..677954))
/locus_tag="NECAME_01137"
/product="hypothetical protein"
CDS complement(join(677038..677178,677246..677310,
677897..677954))
/locus_tag="NECAME_01137"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69027.1"
/translation="MAMWGMLKKIFLRHNSSDEEELQNEQSLCDASNVNSEPHAMDGM
EDAVEHKPVNESAEATPDSGLHDKNVRKIMRPVMFIWHYLKEK"
gene complement(683977..687927)
/locus_tag="NECAME_01138"
mRNA complement(join(683977..684558,684616..684729,
687859..687927))
/locus_tag="NECAME_01138"
/product="hypothetical protein"
CDS complement(join(683977..684558,684616..684729,
687859..687927))
/locus_tag="NECAME_01138"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69028.1"
/translation="MAFTMIIFPLLALLSYGIVSEAQYVPNFGLERFNPFPSGFSIFP
STFNPFPYGFPKFPDFWSIFGFGKELEKKIISTVEKATKAGGIYSVNGTTVIKQTIGG
KKMIAVIPRNSSYSFSTKKLLKNGHSESTVRLTIDGQTEVYTTVNGNTTVTDGNGTPL
TKGSFFSEDSTVDPEVTDVPDHTEAPEGPKASETTTTSADSESEETVPEDSRVITTGK
PVDGNKIDEVEESTGVSETPRSGDDTSRAATRADRL"
assembly_gap 686890..686989
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 690319..691381
/estimated_length=1063
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 695518..695617
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 696779..696878
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 697576..698105
/estimated_length=530
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 698661..699136
/estimated_length=476
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 701451..701589
/estimated_length=139
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 708157..708256
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 710294..715211
/locus_tag="NECAME_01139"
mRNA join(710294..710408,710968..711084,711219..711284,
711401..711513,711599..711727,712422..712582,
712653..712815,714891..715042,715097..715211)
/locus_tag="NECAME_01139"
/product="hypothetical protein"
CDS join(710294..710408,710968..711084,711219..711284,
711401..711513,711599..711727,712422..712582,
712653..712815,714891..715042,715097..715211)
/locus_tag="NECAME_01139"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69029.1"
/translation="MIQIVLCLDIREYLNLSFFFLVKLIIRLRQISRKVSLVYPTFRN
GMHFFEMKIPIFLLHSLLMVIKVKFLPISTTVSLMCLLRHVLICSAVFNLLTFLTGLF
LGILREDLLIVSLVLTVAGLLGMLLFAITWFIRPKVIHRPIYFVKHWKEEKFSKEATI
NPDTTEAVMKNIRGIPFLIQAIQYSMEATYYRDILSEMGEGVVRTSVIHTAPACTSIL
DSESEDETKAVPFTPSYLQFLVFFNFLISKNQKDGCFVRNSAEEQWLPFGESWRNEQL
RLSLERGSSNLLKQGLVSRYSFPRTSKSFQVFPYCEASPHGDRGHEAVEHDFSRIESI
KRPHGGRNKSQNRQQFQVRCIGMSASFIERFNNSFRNSSFNN"
gene 716420..717510
/locus_tag="NECAME_01140"
mRNA join(716420..716434,717214..717287,717387..717510)
/locus_tag="NECAME_01140"
/product="hypothetical protein"
CDS join(716420..716434,717214..717287,717387..717510)
/locus_tag="NECAME_01140"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69030.1"
/translation="MGEPTGLISSLVVVVSFHGTFVTKADRAYKIIISVPEMSPLGTT
ELLNTIPTPTCTYSIHTQTPDGPIVM"
gene 717578..719833
/locus_tag="NECAME_01141"
mRNA join(717578..717691,718579..718647,718701..718881,
718941..719065,719828..719833)
/locus_tag="NECAME_01141"
/product="hypothetical protein"
CDS join(717578..717691,718579..718647,718701..718881,
718941..719065,719828..719833)
/locus_tag="NECAME_01141"
/inference="protein motif:HMMPfam:IPR001507"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69031.1"
/db_xref="InterPro:IPR001507"
/translation="MGTVGEKIYHVWQCDSSATGFLVHSCSVGDGRGERIDLIDVDGC
AVDPAIQPDVFYEDENRAVVEVYGYKFSGASVLNYECVLEICRSNLECENLTPPKCAR
EQKEKSVFPQEALRRSRSIGQDMSHHNKRGQIEVAATLTMEDRMDPNTVTSANDLPTL
NQQN"
gene 721390..721896
/locus_tag="NECAME_01142"
mRNA 721390..721896
/locus_tag="NECAME_01142"
/product="hypothetical protein"
CDS 721390..721896
/locus_tag="NECAME_01142"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69032.1"
/translation="MGGVAFWSANGPRMGDTERRSAECHQMGGVKLRSAAGHHTGGMA
VRNVGPRYGTSVRGTERRSAVRNFGPRYETSVHGTKLRSTVRNFGPRYGTSVHGTKLR
STVRNFGPRYGTSVHGTERRSTVRNVGPRYGTSVRGTKLRSTVRNVGPRYGTSVRGMS
PNGRCWAR"
gene complement(723411..728101)
/locus_tag="NECAME_01143"
mRNA complement(join(723411..723557,723615..723755,
723842..723946,725211..725303,725370..725492,
725553..725630,725745..725850,725940..726014,
726499..726584,726706..726792,726853..726997,
727100..727207,727274..727354,727415..727475,
727897..727963,728027..728101))
/locus_tag="NECAME_01143"
/product="Flavin-binding monooxygenase-like protein"
CDS complement(join(723411..723557,723615..723755,
723842..723946,725211..725303,725370..725492,
725553..725630,725745..725850,725940..726014,
726499..726584,726706..726792,726853..726997,
727100..727207,727274..727354,727415..727475,
727897..727963,728027..728101))
/locus_tag="NECAME_01143"
/inference="protein motif:HMMPfam:IPR020946"
/note="KEGG: bmy:Bm1_32235 Flavin-binding
monooxygenase-like family protein; K00485 dimethylaniline
monooxygenase (N-oxide forming) 3.9e-166"
/codon_start=1
/product="Flavin-binding monooxygenase-like protein"
/protein_id="ETN69033.1"
/db_xref="InterPro:IPR020946"
/translation="MRVAVIGAGASGLPAIKSAVEDGCEVVCYEMSNDIGGLWRYKPD
ACPGEGTVMKTTVINTSKEMTAYSDFPPPKDAANFMHNTELLEYFRSYAKQFDLEKYI
RFSHKVKSIKRNSRFSETGQWDIEWLDLKTNNTSIETFDGVMVCTGHHTDPYWPAPFP
GQKLFKGNIVHSHDYKDHRGYEDQTVVVIGIGNSGADIAVELSKISKKVYLATRSGSW
VMNRVWDGGEPADLAYLSRFMFMLKALAPFAAQNFVLERKLNKRFDHGRFGLMPKHRV
LAAHVTINDELPNRIISGTVVIKPNIGSFTEDGVIFEDGTEIPKVDTVIFATGFSFGF
PLIEEGQLIPVKENRVDLYKYMYPAQLSPKNSLAVIGLIQPTGSIMPISEMQTRVFIA
ALNGKIKLPSKEKMERDIKRKHENIAKQFIVSRRHTIQVYYVEIMDELAKLLGCRPAV
LSRFFYDPLLAKSLFFHGLVPYQYRLQGPHAWSGAREAIVTFEDRVFNTTRTRKTKET
MSSKPPIKMFHVLRLLD"
gene 739388..743603
/locus_tag="NECAME_01144"
mRNA join(739388..739495,741991..742102,742954..743082,
743136..743245,743309..743420,743482..743603)
/locus_tag="NECAME_01144"
/product="hypothetical protein"
CDS join(739388..739495,741991..742102,742954..743082,
743136..743245,743309..743420,743482..743603)
/locus_tag="NECAME_01144"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69034.1"
/translation="MPISVWPTTAATIIALIACLAFSIFFQRGLSGFSKQVNAFISLG
DFSSILLQSIVFIISAVVIIYLLVVYLASARVFSNVLGICGSPCVLYISSFSSQGFLI
LWVLLLCFVSSISLVYFLFIGGIYSFCALVDQQCFDFRVLIPAVVSRFSNKKVDMIFC
AEKKELLCSQNNNQIWNFLLSFIFALVTLAALIFLQNCVVYGLGKRQASKEQRSRERR
EGKEKYEMKQLS"
assembly_gap 739745..739844
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 741468..741782
/estimated_length=315
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 742665..742764
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 743853..753065
/locus_tag="NECAME_01145"
mRNA join(743853..743881,748691..748842,748910..748998,
749208..749249,752537..752738,752806..752939,
753051..753065)
/locus_tag="NECAME_01145"
/product="hypothetical protein"
CDS join(743853..743881,748691..748842,748910..748998,
749208..749249,752537..752738,752806..752939,
753051..753065)
/locus_tag="NECAME_01145"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69035.1"
/translation="MPNSADVFHRPCPVPVATTLVSSSRVSSLTLNRSADLFASTSAE
DSFVSIGTTDPESGVFGTSTAQLKCSKRPLCALFMDDERTKQSLVLIPLEDYCYVLTR
VMHFNRASIESAFLKIVTIPLLEYLGGATSLYSWLGCMVAAGESRGGVTLWDARVNES
VAHFTTSSLNAKRSVFAVDGAARVLALAGDSGMVHLYDIAARKEIVKKKISPSDVKVT
DG"
assembly_gap 746969..747760
/estimated_length=792
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 749335..750680
/estimated_length=1346
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 759116..759215
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 760829..761738
/locus_tag="NECAME_01146"
mRNA join(760829..760893,761189..761300,761551..761617,
761650..761738)
/locus_tag="NECAME_01146"
/product="hypothetical protein"
CDS join(760829..760893,761189..761300,761551..761617,
761650..761738)
/locus_tag="NECAME_01146"
/note="KEGG: cel:F56E3.4 fax-1; defective FAsciculation of
aXons family member (fax-1); K07295 nuclear receptor
subfamily 2 group A 1.7e-13"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69036.1"
/translation="MIPPHIAAAVALSMNHRMAQTSTPPFDPTTISVSSFPTLSRDSP
PVASSPTLSCAVCGDVFLHVMVVLDSSKDLFVGGSYIVFPAVTDLDYSSVISIRLRYL
SYPQGCLE"
gene 761978..762319
/locus_tag="NECAME_01147"
mRNA join(761978..761990,762040..762136,762202..762319)
/locus_tag="NECAME_01147"
/product="hypothetical protein"
CDS join(761978..761990,762040..762136,762202..762319)
/locus_tag="NECAME_01147"
/note="KEGG: cel:F56E3.4 fax-1; defective FAsciculation of
aXons family member (fax-1); K07295 nuclear receptor
subfamily 2 group A 1.1e-17"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69037.1"
/translation="MNKDAVIAYSAVQNERQPRNTATIRPTVDMDPHNFLREYAGAVS
AVLSQPELPPREESPLSATSEGRTEDEKVTF"
gene 763505..763767
/locus_tag="NECAME_01148"
mRNA join(763505..763572,763650..763767)
/locus_tag="NECAME_01148"
/product="hypothetical protein"
CDS join(763505..763572,763650..763767)
/locus_tag="NECAME_01148"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69038.1"
/translation="MHLEQSLTVLSQHTSRNHPASSRCGRLLLMLGQLRSIPPIFVDQ
ILSPEGGYHKILSRYLS"
assembly_gap 764470..764569
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 772020..778337
/locus_tag="NECAME_01149"
mRNA join(772020..772136,772206..772316,772747..772845,
774098..774231,774963..775154,775919..776041,
776347..776397,776612..776754,776816..776962,
777558..777673,777734..777835,778230..778337)
/locus_tag="NECAME_01149"
/product="reprolysin family zinc metalloprotease"
CDS join(772020..772136,772206..772316,772747..772845,
774098..774231,774963..775154,775919..776041,
776347..776397,776612..776754,776816..776962,
777558..777673,777734..777835,778230..778337)
/locus_tag="NECAME_01149"
/inference="protein motif:HMMPfam:IPR001590"
/codon_start=1
/product="reprolysin family zinc metalloprotease"
/protein_id="ETN69039.1"
/db_xref="InterPro:IPR001590"
/translation="MYVTVWELQKEVNVQARHYGHQRERIRAAMLTLMHAVNLYAFQL
DIRIAIVDVLPIRGHNISLEQFLDWRTTTEDLVTHDVAILIRHRYEGGIAYVNGVCKR
TAVGIAGFFPEAPYEYASVFFHELSHLLGLSHTSTADCKCSKKNRGNCLRIDGFDREC
SAQALVDLLPSIECLGEPRRLPRTVLPLCGNGIVEDDEDCDCGPAKQVLFFLSKVLNL
YCNNALCEPRTCRFIVAREYLYTTFTFGVALAICGILMLIKRTFSRDPDSTLAKKKKT
KLPPLHARMLFSPDSPASEVPTNLQTTNTFLSTRKLSSPNPVKLPTIMCTPVRPAPKP
PVQLTLDSVIPVTKEPIVTSEYVPMNPPKSMRIVQREPSLRLPSITAHRPKISDPIPL
IVAGRVVNEQASPETPISLPRKPSQEFIASLEDALRAQTSERRVKLSLEHKNTTLPKP
PLPDRADKPALRPFLDPPKERVYDLPTVDS"
assembly_gap 780941..781255
/estimated_length=315
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(781342..784572)
/locus_tag="NECAME_01150"
mRNA complement(join(781342..781404,782299..782418,
782738..782857,783122..783236,783452..783537,
783624..783750,783863..783920,783976..784043,
784104..784203,784308..784452,784525..784572))
/locus_tag="NECAME_01150"
/product="CBS domain protein"
CDS complement(join(781342..781404,782299..782418,
782738..782857,783122..783236,783452..783537,
783624..783750,783863..783920,783976..784043,
784104..784203,784308..784452,784525..784572))
/locus_tag="NECAME_01150"
/inference="protein motif:HMMPfam:IPR000644"
/codon_start=1
/product="CBS domain protein"
/protein_id="ETN69040.1"
/db_xref="InterPro:IPR000644"
/translation="MSPTSSWLEFEKLSTPDSCLPDRDLLARLLMSNSCYEAMPVSGR
LTIFDQKLLMWDAFMLLVNSESRHVLLSDSEHDSAITGILSVTDFIRIIIKMFREKDS
AMDIKINDLGVMTIKQFRELVHKAGKLRKLVSISVENSLLDAVRILSAYRVHSLPVLD
PLAGNPVAVLTHKRILKFIWAFGRKLFHPDHFAMSPRELDIGTWSGVRVVGVLDVYSR
FDAIGVALHNEGLMLLNASVKEALEFKHICQSRCERVVSVRENETFYSVISTLVHHKV
HRVCVVDANHVLQGIISLSDVLKALVLEPAKYMNPRSAAPRRVSQESFDLSNMTLKGM
SITVRQNHHVYQTLG"
gene complement(786836..792564)
/locus_tag="NECAME_01151"
mRNA complement(join(786836..786931,787026..787145,
787865..788011,788685..788811,788867..788924,
789014..789087,789152..789251,791283..791424,
792427..792564))
/locus_tag="NECAME_01151"
/product="CBS domain protein"
CDS complement(join(786836..786931,787026..787145,
787865..788011,788685..788811,788867..788924,
789014..789087,789152..789251,791283..791424,
792427..792564))
/locus_tag="NECAME_01151"
/inference="protein motif:HMMPfam:IPR000644"
/codon_start=1
/product="CBS domain protein"
/protein_id="ETN69041.1"
/db_xref="InterPro:IPR000644"
/translation="MAHSQSVSPLRSHLTIGPHSQSLRGPSRTPQGHAHTYSVREKSV
GEILHYEADSYARLLQMNQCYEAMPTSSKMVVFDTELVLWKAFNGLVYQNTRHVLLSN
GEQGGLITGILSVTDFIRVMLRLHRERGNSDALADEKEDIGKLTIQKYRELVQKEGKL
KELVYINANSSLLEAARLLAQHRIHRLPVLDPESGSPLFILTHKRLLKFLWCFITVFI
QDSQSEKDRVVSVRDTDTLWKAITVLVERNVHRLCAVNEKGAIEGIISLSDVINHMVV
KPGANLKPIRAPPRHHSYHTVEQNEKELRHRLQDSAMLLEDTATGKLQKDFNNMTIR"
assembly_gap 788099..788474
/estimated_length=376
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 794346..794445
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(800931..802698)
/locus_tag="NECAME_01152"
mRNA complement(join(800931..801009,801080..801219,
801405..801494,801803..801886,802582..802698))
/locus_tag="NECAME_01152"
/product="hypothetical protein"
CDS complement(join(800931..801009,801080..801219,
801405..801494,801803..801886,802582..802698))
/locus_tag="NECAME_01152"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69042.1"
/translation="MTEIGCEKDSFYDLTCFNSTLAYFEKTLFGVMRNYVAAQLNLAS
HSPGGVPSSKEQMVASTLAVMGKVNPLNIEDEKGLLTTDGARAIVEALVDNVLANSPG
NYETYCPEGCEQSKSPWMSWFIASVIANVLLVAIASAFTMHSSLRAKIMHQDVQKMGT
NAGKIVKQN"
gene complement(802747..805325)
/locus_tag="NECAME_01153"
mRNA complement(join(802747..802776,802817..802918,
803119..803168,805307..805325))
/locus_tag="NECAME_01153"
/product="hypothetical protein"
CDS complement(join(802747..802776,802817..802918,
803119..803168,805307..805325))
/locus_tag="NECAME_01153"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69043.1"
/translation="MSPKATISDVTLHRFPQFFPILTAWYVLVAVAIPANCDYLDDSV
SGCSSKCAVTKDKCFIPESSTS"
assembly_gap 807335..807434
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 812075..812268
/estimated_length=194
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 812987..814866
/locus_tag="NECAME_01154"
mRNA join(812987..813093,813167..813326,813544..813600,
813667..813803,813863..814139,814568..814621,
814687..814866)
/locus_tag="NECAME_01154"
/product="hypothetical protein"
CDS join(812987..813093,813167..813326,813544..813600,
813667..813803,813863..814139,814568..814621,
814687..814866)
/locus_tag="NECAME_01154"
/inference="protein motif:HMMPfam:IPR002181"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69044.1"
/db_xref="InterPro:IPR002181"
/translation="MRKYTSDVKANGKDSSELDPCLAARSREKRSFFGRWKKWVIIGL
ILFVLLLAITVGLLVLFLLPSKPAEPTMDYIHQEVETGPLDYDAEIIDYEVGSIAIRK
TPLFDKDLEAAAVGSHSMQYSRHKPYKNANNVIFQSVGKRDPAYKLREEIIKVERKPT
PRGSPVLIEVPTTTTSTVNAVDVTQANLVTKTTIADRFTTPLPTVPTTSSTSSTTTTT
VATTSVTTVQTSSATSPTSESNLFEREKPVDVPNKPVTLMSTEVKKDCSVHIESGLTS
GIYLISPDGADAFPAYCDQETAGGGWTVIQRYKKSFFKLSMLKCYSV"
gene <815463..816314
/locus_tag="NECAME_01155"
mRNA join(<815463..815586,815654..815808,815861..816069,
816149..816314)
/locus_tag="NECAME_01155"
/product="fibrinogen beta and gamma chain, globular domain
protein"
CDS join(<815463..815586,815654..815808,815861..816069,
816149..816314)
/locus_tag="NECAME_01155"
/inference="protein motif:HMMPfam:IPR002181"
/codon_start=1
/product="fibrinogen beta and gamma chain, globular domain
protein"
/protein_id="ETN69045.1"
/db_xref="InterPro:IPR002181"
/translation="NGNSNYHSTFQKVTVFRRISGSVYFYNRTWNEYESGFGDMNGSF
WLGLAKINRLAPRLGDSWTLRIEIRGDFCSGLGCLNQKNGSWWAEWPFKLDRSDLAAL
QLGDASTGYVLELGPATAGNLTTPGSSGFMEKFNSGHKFTTIDKDNDDVQDVNCAQFR
NFGGWWHGGCGYVALNGLYKDTAPTLRYMVYTYSDGHKKYFLHPMKSVMMIRPGSSH"
gene complement(819273..832849)
/locus_tag="NECAME_01156"
mRNA complement(join(819273..819358,819421..819496,
819557..819668,820486..820648,820710..820791,
822727..822750,822806..822889,822962..823138,
823159..823281,823339..823533,824392..824496,
824688..824798,824926..824994,825069..825189,
825246..825355,825421..825480,825537..825876,
825951..826081,826335..826421,826478..826594,
826719..826805,827515..827613,827927..827999,
828104..828242,828350..828425,828497..828606,
828751..828817,828881..829033,829653..829779,
832812..832849))
/locus_tag="NECAME_01156"
/product="hypothetical protein"
CDS complement(join(819273..819358,819421..819496,
819557..819668,820486..820648,820710..820791,
822727..822750,822806..822889,822962..823138,
823159..823281,823339..823533,824392..824496,
824688..824798,824926..824994,825069..825189,
825246..825355,825421..825480,825537..825876,
825951..826081,826335..826421,826478..826594,
826719..826805,827515..827613,827927..827999,
828104..828242,828350..828425,828497..828606,
828751..828817,828881..829033,829653..829779,
832812..832849))
/locus_tag="NECAME_01156"
/inference="protein motif:HMMPfam:IPR000008"
/inference="protein motif:HMMPfam:IPR019558"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69046.1"
/db_xref="InterPro:IPR000008"
/db_xref="InterPro:IPR019558"
/translation="MRAARLRPARRKIVQASDNNFFERITQPLDVEQPAEDELLTIRN
LTLNADRKLLEALYVEALYTITHKVGKEECESRENLYKYVRSAFQGDTQLHNTLMEKA
KQNKPPVVLLNVLLLEAKDLIAKDINGFSDPFAMMGVVPGKREIVEVTETTEEENVKS
PKTMNLKKDNVLQRFGGSFRRKVGKKGAKIKSDSGTIPAKLIKASSVQKKTLNPKWNE
RFQFIVDDVQTDRFHMDIWDHDDEEQSVLDAVSSLNQITGGFKGLGRFFKEVAQSARA
DSDDTTDDFLGCISMNLSDIPPDGIQQWFTLQPRSEKSKVSGSVKLKLWLSTREERFG
AEEDDLLDVKEHIELMRQFALYEIRLSGAPVRLWDGVFPDKANTILRQHAVQGDLTEA
EEDMLTASFSAFDSHCKRAFAEHRRRFHPSKRNASEEFASLVRCMKALRDSPFYQKYL
PYKRPFHAHLESLIIVCAFLSAMSYFEPTITWIFQKSAEDFFDETVEIVQDEDPCKEL
LKLLSVINGSCSRFQQYANIIREVGRIDYCQLTLSTWDRMLNEYLTSELMSERKTDLR
SQMKISANQDPPNEDDLVDLIRIHMAFVELRNYRLANRVRGKDESEWYGIFNRGIKNF
LNLAKEKALARISLSCQLDVPICTSSNDMRHSSSHIDVCHIVEQMTVCWDRMDVNELT
LKIDYTRALVDILCDIVIAYTQKLCSAINNCEQVRRSLMIHEKLHLDDLAIAYERAGH
GAPTWKTTVEQRLEQTDSAICAEIDRVVGLLTSRLRPQMKKHVFHLAWSPSAHPVEDS
LKPLTDMIDIELSAVHKNLLHKNFLRVMSAQVAIVVHLLRECVDENPGISMEFSFCAR
IGSRKIVDTQMEPTFYHRLFEAWHVLVDFFHAGGKGLSTDVLETAPDHVALVKILSLN
QTPTQQLIEKYYKDLLKQQAVAEYNVNNEVSECKYGILNVRAYYNASSQTLVLDVIGA
KQVIPLDANGLSDPFVVIRLVPKYRYPNQIVSKTRVVSKTLNPIFDETFEFHIPPKLP
PCAMLHFTVMDHDYLRSNDFAGEAFLELADVPGFGVAGGNTLRQFNLILIQPVQNNKE
IIDVLTSRKEDKEALEFLRSITTAY"
assembly_gap 837063..837475
/estimated_length=413
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 843093..843192
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 853457..853931
/estimated_length=475
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(854576..855689)
/locus_tag="NECAME_01157"
mRNA complement(join(854576..854699,855607..855689))
/locus_tag="NECAME_01157"
/product="hypothetical protein"
CDS complement(join(854576..854699,855607..855689))
/locus_tag="NECAME_01157"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69047.1"
/translation="MESRTGSVGDCSKIANYRTSRQNLFRRRSTRRRISNAQRLADLE
DFINRRLVSHFFSLKLYGSHSLWP"
assembly_gap 855816..857190
/estimated_length=1375
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 866271..866370
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 873010..873461
/estimated_length=452
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 883570..883920
/estimated_length=351
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 886177..887708
/estimated_length=1532
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 888288..888387
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 889426..889966
/estimated_length=541
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 892288..892855
/estimated_length=568
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 894844..895031
/estimated_length=188
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 897504..897603
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 900043..900278
/estimated_length=236
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(903053..916521)
/locus_tag="NECAME_01158"
mRNA complement(join(903053..903160,903222..903320,
904591..904720,904779..904828,911062..911148,
913219..913375,915077..915224,915295..915367,
915652..915752,916013..916076,916138..916305,
916375..916521))
/locus_tag="NECAME_01158"
/product="CBS domain protein"
CDS complement(join(903053..903160,903222..903320,
904591..904720,904779..904828,911062..911148,
913219..913375,915077..915224,915295..915367,
915652..915752,916013..916076,916138..916305,
916375..916521))
/locus_tag="NECAME_01158"
/inference="protein motif:HMMPfam:IPR000644"
/codon_start=1
/product="CBS domain protein"
/protein_id="ETN69048.1"
/db_xref="InterPro:IPR000644"
/translation="MLETTKPLNVYCNSESGYDSPHASTDSSRRNSIGFKEYVKSRRF
TMMSKPNRVTVPIPSTCDASRKTSSSDSNFCDAPDDLDDELSPRPVYQRRMSVPEKVF
HSADYAILRPSMEADVKFEIVAAFDRYTDPYRHYMQSLTCYDLQPTHGAVVVIDGELK
IHKALTALSQCGHQVAIVSNLDVRGGLGIITVTDCLKAIVLASEGVQNVAEQTVAQFL
KSNNRKQLVTADVNTSVWDAAKMICLNRIHRIPIVHFDEVVGDAKKQQGNLLYVLSLK
TVFMETIMKLSDPKPSLCPHIKQRTISERKLGTWSRLYTVPQTATCDDAITLYLEKKI
SSVPVVDSCGRVLGVIGKSDIMLELVRHPNNYLEILDIPIMDLIASMSPPVYGTTTMT
VFDCIAALVNTDRQSIVIIDVERRPQAVISYSDIMDFIQNSSDSHHKLSLA"
assembly_gap 908716..908815
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 917309..917408
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(925014..930779)
/locus_tag="NECAME_01159"
mRNA complement(join(925014..925253,925315..925442,
926999..927143,927204..927329,927394..927571,
928482..928607,928667..928815,928870..928969,
929026..929090,929148..929237,929304..929501,
930594..930779))
/locus_tag="NECAME_01159"
/product="hypothetical protein"
CDS complement(join(925014..925253,925315..925442,
926999..927143,927204..927329,927394..927571,
928482..928607,928667..928815,928870..928969,
929026..929090,929148..929237,929304..929501,
930594..930779))
/locus_tag="NECAME_01159"
/inference="protein motif:HMMPfam:IPR006863"
/inference="protein motif:HMMPfam:IPR013766"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69049.1"
/db_xref="InterPro:IPR006863"
/db_xref="InterPro:IPR013766"
/translation="MLYLLLLLLPWVTSEVANYGTVPKGLNPTLYASDDLVLQLDDNS
FNDTVFCVGKNCSSYLVENILLAEFEFYSDWCGHCRSFAPLYKALANDVRGWQDVVKI
AAINCADSVNHMTCQQNGVQFFPLIKYFPRNSTDAFSGSKLRPYQSMAEMRDQLTKVV
MDDYAVNRFSDWPMFDYLGDVVNYGELWEGAPASTQHMAIIFENHQASLTGAQLLLDL
HRHRNRLLVRRCLRNHPLADALHLTDFPSLAIFKRGEKKPILVAELRRLLLTELENFL
SNESDPSRQVVQFHSRKNKTNPCDSDPEKCRALFFASEVDMLKAMRYALFRETSRTNA
PLTGSNLTALHAFVNLLADHFPVSTTYGNNTVLDRSTRAVKVFARLRDFLENRGLDST
ISPEEWQREFIAAEEAAGNPFAVNSDWEHCRGSSGQYRGYTCGLWVTFHALTVSAYKQ
AEEHLDDFKPLTPLQAIRAWVVSFFGCMHCREHFLKMTTGTFPMEVQVKTPEDVFMYL
WRAHNIVNARLQGRDTEDPQFPKLQFPAHFLCPNCTANGSPVDTETRDFLLDYYSQIK
PFQPPKFLLK"
assembly_gap 932474..932573
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(937019..945135)
/locus_tag="NECAME_01160"
mRNA complement(join(937019..937106,937179..937241,
937376..937481,938321..938386,938488..938623,
942720..942877,942937..942989,943080..943183,
945028..945135))
/locus_tag="NECAME_01160"
/product="hypothetical protein"
CDS complement(join(937019..937106,937179..937241,
937376..937481,938321..938386,938488..938623,
942720..942877,942937..942989,943080..943183,
945028..945135))
/locus_tag="NECAME_01160"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69050.1"
/translation="MLLLSFLLQLASAGQIPVPPIFTPCTFPSPVYDQHEHRMTCTTI
SRLPFICDLHHQLSYANLAGIELAYERYKPYFYQNNRTTLAVLIVLKSHSVRQLEAPT
SAASVYEEQSYACLFENECNRVDSEVVLGFVNNVKIFIKVYAWKVYERWFALDDSCTR
PNVLALMVLDGLINDARKIPYVRIHTGEPRLRFALGNIASEANNALVQGWPLQKAIED
MVDDIGHALRELHELKGEPRDHSVPRWARHAFLICFALVILALMVEWYIVRRKLGVQK
SGQIKISAGKSKTHLMF"
assembly_gap 939810..941394
/estimated_length=1585
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(945972..956417)
/locus_tag="NECAME_01161"
mRNA complement(join(945972..946013,947414..947453,
956076..956209,956379..956417))
/locus_tag="NECAME_01161"
/product="hypothetical protein"
CDS complement(join(945972..946013,947414..947453,
956076..956209,956379..956417))
/locus_tag="NECAME_01161"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69051.1"
/translation="MYPQAVAAMNICEAFSWYPGQKSVPISRTFIIWQSPTVTLITCT
SETENGLNFGLLLRNIKYGSVFTIAAEVWYVNYPRCKKNV"
assembly_gap 947969..949864
/estimated_length=1896
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 953899..954674
/estimated_length=776
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 958232..958594
/estimated_length=363
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 959336..963115
/locus_tag="NECAME_01162"
mRNA join(959336..959483,959550..959668,959781..959867,
960589..960659,961208..961319,961383..961551,
962913..963115)
/locus_tag="NECAME_01162"
/product="hypothetical protein"
CDS join(959336..959483,959550..959668,959781..959867,
960589..960659,961208..961319,961383..961551,
962913..963115)
/locus_tag="NECAME_01162"
/inference="protein motif:HMMPfam:IPR007744"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69052.1"
/db_xref="InterPro:IPR007744"
/translation="MLTTRMMPKFGPSLMTGLSVFALTTFMFVSLRPKITILPTAPPP
KSAQALPPAPKIKFVEKRLALKPNLTSPPAISKPSQRMIEFYKIQAFQRREYLKVVQQ
SLSKNYMFVYNNMGPEVHCPELVRVGTTNDGGKWICSPFRIPDGCAIISLGLFNEVTF
EQELQYIINKRCKIFAYDSQQQAPHTLKLLESIRTKAMKATISAETDVSKQRYAIEDL
MVMEGVRSIEILKIDIEVLFQIMIEIHGTPAEMVTLLTKISRQGYWLYSYEINGAWHN
LCEFSFIHESAFERYGATPLAKFLDF"
gene complement(964920..965438)
/locus_tag="NECAME_01163"
mRNA complement(join(964920..965043,965103..965186,
965287..965438))
/locus_tag="NECAME_01163"
/product="hypothetical protein"
CDS complement(join(964920..965043,965103..965186,
965287..965438))
/locus_tag="NECAME_01163"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69053.1"
/translation="MSLEVDVSGGILQCYNDQYTCESFCGFECWTVRTCEHRSTSNYI
CIPQPRAIILFFVIWCALTVAAIAILAVTCWRILRFRCFGGNKVHSGLIRSVSDLEQR
VQVSTLEPGYSAKCCSG"
assembly_gap 965822..966552
/estimated_length=731
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 967511..968223
/estimated_length=713
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 971770..979953
/locus_tag="NECAME_01164"
mRNA join(971770..971812,971875..971978,972042..972149,
972412..972493,973467..973602,973909..973975,
974188..974334,979386..979475,979616..979732,
979792..979953)
/locus_tag="NECAME_01164"
/product="EGF-like domain protein"
CDS join(971770..971812,971875..971978,972042..972149,
972412..972493,973467..973602,973909..973975,
974188..974334,979386..979475,979616..979732,
979792..979953)
/locus_tag="NECAME_01164"
/inference="protein motif:HMMPfam:IPR002369"
/inference="protein motif:HMMPfam:IPR013111"
/codon_start=1
/product="EGF-like domain protein"
/protein_id="ETN69054.1"
/db_xref="InterPro:IPR002369"
/db_xref="InterPro:IPR013111"
/translation="MRLLFLLLPVLYQLGECQDLTAICGSLEAQASCGQCIKQHPDCA
WCRDPHTTHQNRCQVRSAFKAETCNPTYVYSPATEVRIGPHNLPLGSPGSGKSVVQIE
PQQVVLRMKPGDTLNVQYKYMHKKPAPGYDVKEFLVQTSEFKKLGLEMKFFVDCNGRE
VEGKQCPTLKEGQKVNFKIKVTLLECRDGADVAISVGVYGYTTVSALYITPLCGCECE
KPTQQASSRFQAECSGNGHCECGKCVCDEGFNGAFCGAPDEVVTASTPEKEEMPEPEE
EPSESVEPSISEEDVKDAVCVMVEENPEPANSEENTPTETSDGDYGSEPELPEEATSS
SSVLVFLTSIFIATIFI"
assembly_gap 975408..975921
/estimated_length=514
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 983046..984130
/estimated_length=1085
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(985488..987497)
/locus_tag="NECAME_01165"
mRNA complement(join(985488..985670,987438..987497))
/locus_tag="NECAME_01165"
/product="hypothetical protein"
CDS complement(join(985488..985670,987438..987497))
/locus_tag="NECAME_01165"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69055.1"
/translation="MGEIRAPCCMNPKNACICAMAFEALVLAQSLVFTIGYISKGEAL
YNSTHTFFSEIVSWEFLIPIVAVQVSFLLRSLFYFR"
assembly_gap 990289..990846
/estimated_length=558
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 993122..993253
/estimated_length=132
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 996481..996732
/estimated_length=252
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1002218..1002613
/estimated_length=396
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1006956..1008330
/estimated_length=1375
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1010692..1015694
/locus_tag="NECAME_01166"
mRNA join(1010692..1010740,1010865..1010974,1011156..1011333,
1011388..1011499,1011571..1011754,1011812..1011869,
1012177..1012248,1012316..1012465,1012539..1012636,
1012743..1012851,1012961..1013032,1013162..1013270,
1013707..1013792,1013852..1014000,1014060..1014168,
1014262..1014332,1014386..1014496,1014553..1014678,
1014882..1015011,1015102..1015216,1015283..1015428,
1015567..1015694)
/locus_tag="NECAME_01166"
/product="EB module"
CDS join(1010692..1010740,1010865..1010974,1011156..1011333,
1011388..1011499,1011571..1011754,1011812..1011869,
1012177..1012248,1012316..1012465,1012539..1012636,
1012743..1012851,1012961..1013032,1013162..1013270,
1013707..1013792,1013852..1014000,1014060..1014168,
1014262..1014332,1014386..1014496,1014553..1014678,
1014882..1015011,1015102..1015216,1015283..1015428,
1015567..1015694)
/locus_tag="NECAME_01166"
/inference="protein motif:HMMPfam:IPR006149"
/codon_start=1
/product="EB module"
/protein_id="ETN69056.1"
/db_xref="InterPro:IPR006149"
/translation="MRTRCSSEKAPLFVLSVCDANSLSGRMCMTVELYRTADNSSQFY
ECAPLAREEVVEYNLTDKYLGVWNLRDCPENFDFDVSRQKCIERKTMRRQQAACAKNP
ASTGCQAPCSGAASIPTIGSPCDWKEAALHPDPKSNAYFVQCSPQSAGTPCGEWTRMA
CAPNTVFSKPSSICVSMSVQSSACGSQREPVCNCAKTAGATQCPGTSTCNKNVCCQQK
DVIDNFIQHQAPYSACVQGLGCCPVPVNQPKEAIQITLCPGSFSPPLGSCGSCPTGTS
CSPAINACCPFATKSPPDLTFNVVQLCPNGSPALQSCSRGCPDGYSCYQGSCCPMSCP
VGQTALGFCSSGACSGGGSCYTPGGCCCQETVKLPVCANGMWATYGMLEWRMLSDAIL
SHRGTSPNALWKQQYDLRFGTFMSGRALLSFTSLSKRNNLIRCSNGCANCCPFGHSCV
NGGCCPLPQCPAGGLALTMCGTRSCSVGNECVGGGCCPLPRCPSGLQATQRCQRGIGC
PRGHQCENGVCCAMPTCSAGLIAASVCGMGNSCPMGFVCEVHPQKFILPQHYKFNNVD
AQRGECEEVVAKNRLHFAQMEAELFNGAVEELNALQDLDVLLSEDVAFYRWNQCAQHK
RTQSANVLPIVLAHRVQRAQWERVVPKMPAKVLTLARNGCDQYGSPCTVLLSTARRKP
IIAPVGNITDAPLFFNVATERRCVVNATDVNFDPDSTCLPNEKCINGECRMKLWPGEY
GCITDDECTSRCPNTYCEKKKSDKNVAQCQCRDGQLLFGRCFSQCPPGFHESGAYCMH
DDEDAFWADGDAQDRIKALLNASPC"
assembly_gap 1016038..1017413
/estimated_length=1376
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1022433..1022778
/locus_tag="NECAME_01167"
mRNA join(1022433..1022532,1022591..1022778)
/locus_tag="NECAME_01167"
/product="hypothetical protein"
CDS join(1022433..1022532,1022591..1022778)
/locus_tag="NECAME_01167"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69057.1"
/translation="MENSDDVKTAKLPHFPLFSPRSVRLWIGMLLTTGLYATVSMRVN
LSMAVVCMVNSTAFSTESPANSTSEPTASPKCGAINTDIKTAAHAGYTVRL"
gene 1024139..1026025
/locus_tag="NECAME_01168"
mRNA join(1024139..1024241,1024292..1024395,1024468..1024563,
1025048..1025200,1025256..1025388,1025444..1025748,
1025820..1025907,1025973..1026025)
/locus_tag="NECAME_01168"
/product="hypothetical protein"
CDS join(1024139..1024241,1024292..1024395,1024468..1024563,
1025048..1025200,1025256..1025388,1025444..1025748,
1025820..1025907,1025973..1026025)
/locus_tag="NECAME_01168"
/inference="protein motif:HMMPfam:IPR011701"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69058.1"
/db_xref="InterPro:IPR011701"
/translation="MQSLLLSATFYGALGTISFAGILADRYGPKMIVIVATLDYVIIT
LLTPFLAKWSYYAYFLSRITMGIGEGFIFPCFATIVGKWFTPAEKSTVAAMYTSGNQN
KLPVPWKRMLSSRPLITAVFCQYTYNLQASLLQAFLPTFLKEELMLPLSKNGLYTMIP
FISQLISKNILGILADYLKRNEIIGHTKCAKIFQSVGSFGSAAVLIALATLPNCENPY
LALPLLGLYGNQLVSPFQIHYVNVVVLILGTFFSAGICGFFTCLLCIAPPFSGTVSSI
AMIFGMLGNISGPLMLGLVSKMGFTNKWVISFVICSGFSFLAGVVFLIFGSAKVQQWA
KVQPPKSTSA"
assembly_gap 1024631..1024730
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1027993..1032479)
/locus_tag="NECAME_01169"
mRNA complement(join(1027993..1028118,1028178..1028270,
1028588..1028723,1028791..1028957,1029041..1029181,
1029238..1029336,1029398..1029469,1029754..1029861,
1029917..1030061,1030140..1030349,1030457..1030697,
1030754..1030920,1030974..1031191,1031312..1031468,
1031519..1031615,1031666..1031846,1032471..1032479))
/locus_tag="NECAME_01169"
/product="histone deacetylase family protein"
CDS complement(join(1027993..1028118,1028178..1028270,
1028588..1028723,1028791..1028957,1029041..1029181,
1029238..1029336,1029398..1029469,1029754..1029861,
1029917..1030061,1030140..1030349,1030457..1030697,
1030754..1030920,1030974..1031191,1031312..1031468,
1031519..1031615,1031666..1031846,1032471..1032479))
/locus_tag="NECAME_01169"
/inference="protein motif:HMMPfam:IPR023801"
/note="KEGG: cel:C10E2.3 hda-4; Histone DeAcetylase family
member (hda-4); K11406 histone deacetylase 4/5 1.9e-228"
/codon_start=1
/product="histone deacetylase family protein"
/protein_id="ETN69059.1"
/db_xref="InterPro:IPR023801"
/translation="MCQVFKQKQMDLMAHFERAQQALNMQHLQQYYQTLQQHAQQQVA
NNAAQAGPERMDEGLCDAAVAPLALASSMGSLLGSSQSPTTSREAPPQRVRSEHRNAS
TNSSSQTISQHTKDRLKNMIAQRNREGSQTNLAGTPPQQHAPMSPQVNVSSPHFEPYR
VPVSLHTAQAVSSQPSSEYQLRKVNSEPNLKMRIRAKLLSKGSSPVQNQNNFNFTHPQ
LKRSDSETSGNGATAGSLPMDALLSNAATAFPPHLIMPSPSLPNLAAPNLAQAPQLPI
DLASLMAAAQLTPFLSLPSLFKTHIGLGGGLLEEDVADRAKLAPGLAALGTLSQQLPV
FGNPSLLKQQLRELVLRRKSLVREEPEDDDSLCAQPVLSPGQLPTSLGLSDMSGGKAT
GLAYDSSMARHECVCGESSSHVEHGGRVQSIWSRLCERIAAKKASLEQLRMVHSPTYV
TFFAVSPTACLKMEASQLPLKSFVQLPCGGIGIDSDTYFNDATTQTAARVAAGSLIEL
ASQVAENRLRNGFACIRPPGHHSERDQAMGFCFFNNVAITARYLQNRYPQQCSRIAII
DWDVHHGNGTQLCFEEDPSVLYLSLHRHDNGNFFPGTGAVTEVGRGAGKGFSVNVPFS
GGVMRDADYLAAWRVIVQPVLEQFQPTFILVSAGFDACCGHPNALGGYKISAEMFGFM
TRQLMGFAGGRVVLALEGGYDLASISDAAEQCVKVLCGDDDKAGVLKNEALEGIPCLS
AQETIQKVIAIHKGYWPTLTAEQGLSISELHWQTVGRQFQKLTMGTVS"
assembly_gap 1033582..1034665
/estimated_length=1084
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1036331..1036438
/estimated_length=108
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1038339..1038438
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1039710..1040328
/estimated_length=619
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1041138..1041237
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene <1057617..1057984
/locus_tag="NECAME_01170"
mRNA join(<1057617..1057727,1057880..1057984)
/locus_tag="NECAME_01170"
/product="hypothetical protein"
CDS join(<1057617..1057727,1057880..1057984)
/locus_tag="NECAME_01170"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69060.1"
/translation="DQKDSTIRELECEIASFKEASTAVPDGISIHSPAHLENGECVNS
ISEALQEGNCELKSEIARLRKDVGFSF"
gene 1060297..1068320
/locus_tag="NECAME_01171"
mRNA join(1060297..1060407,1060564..1060688,1061165..1061287,
1061368..1061491,1061547..1061716,1062116..1062209,
1065195..1065383,1065684..1065782,1066005..1066122,
1068256..1068320)
/locus_tag="NECAME_01171"
/product="GRIP domain protein"
CDS join(1060297..1060407,1060564..1060688,1061165..1061287,
1061368..1061491,1061547..1061716,1062116..1062209,
1065195..1065383,1065684..1065782,1066005..1066122,
1068256..1068320)
/locus_tag="NECAME_01171"
/inference="protein motif:HMMPfam:IPR000237"
/codon_start=1
/product="GRIP domain protein"
/protein_id="ETN69061.1"
/db_xref="InterPro:IPR000237"
/translation="MRKTTEQKQMELRSIMTEKELLKTRLEDLENDYESYKSRARYVL
EQKAQSSTEQLHLQLDLSAANDAILELKQSLDVLQFAHDGVLKEARRDRMLREKAETA
VRVAKTQTVEILDQIASVREELFNSNVMLKDRINECVAYQRQISDMEKKMRNENKENA
QIIQTLKEDIAKRERVESDLTCEVKKAKKRYQQAMNMLEDWKNLRSRPSSADAAPQTS
ANERLAELPPVSAAEAALKASVYTSVEPEIQEETLEEILFGEAAGSREPCSENAFTMT
SVPILTEEIERLNKNLQHARELLNETEATNATLVDQSRLLKEEIRRLQRNEQRLCHVE
NTEYLKNIIMKFLSPERVSGERQQLIPILSTMLQLSPEEVENLNRTAAEDGPAGHESD
NSWGSFLRWGRLN"
assembly_gap 1064953..1065052
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1074617..1080934
/locus_tag="NECAME_01172"
mRNA join(1074617..1074655,1075070..1075175,1075245..1075385,
1078968..1079065,1079142..1079237,1079297..1079377,
1079577..1079705,1079763..1079870,1080770..1080934)
/locus_tag="NECAME_01172"
/product="sodium / potassium ATPase beta chain"
CDS join(1074617..1074655,1075070..1075175,1075245..1075385,
1078968..1079065,1079142..1079237,1079297..1079377,
1079577..1079705,1079763..1079870,1080770..1080934)
/locus_tag="NECAME_01172"
/inference="protein motif:HMMPfam:IPR000402"
/note="KEGG: cel:F55F3.3 hypothetical protein; K01540
sodium/potassium-transporting ATPase subunit beta
1.1e-117"
/codon_start=1
/product="sodium / potassium ATPase beta chain"
/protein_id="ETN69062.1"
/db_xref="InterPro:IPR000402"
/translation="MAKGNNPIEENTTLMNGNNKAADYDESFSRFLYNKDRGTVLGRT
AKSWCQITVFYIIFYSCLAAFWIACLAIFLNTLDSKVPRFYGKGTIIGINPGVGYQPW
LKENPDSTLIKYNMRDEQSWQPYVKQLEEYLKKYNDINGTRECGPDDNNSDLVNDGVL
PCRFDLTNFTAAGCGPDKQYGYGRAGSPCVVLSLNRLIGWQPVDYAPDSVPENVKGRY
RSGSIAMYCDGANDPDKEHIGRLKYIPEHGIDGRYYPYVYVPNYHQPIAMVKFESLPR
NKLVLVECRAYALNIEHDITSRLGLVHFELFLEDKAVETKPSSL"
gene complement(1089054..1095241)
/locus_tag="NECAME_01173"
mRNA complement(join(1089054..1089143,1090340..1090456,
1090528..1090680,1091770..1091858,1091927..1092049,
1092147..1092246,1092306..1092408,1094829..1094929,
1095215..1095241))
/locus_tag="NECAME_01173"
/product="SNARE domain protein"
CDS complement(join(1089054..1089143,1090340..1090456,
1090528..1090680,1091770..1091858,1091927..1092049,
1092147..1092246,1092306..1092408,1094829..1094929,
1095215..1095241))
/locus_tag="NECAME_01173"
/inference="protein motif:HMMPfam:IPR000727"
/inference="protein motif:HMMPfam:IPR006011"
/codon_start=1
/product="SNARE domain protein"
/protein_id="ETN69063.1"
/db_xref="InterPro:IPR000727"
/db_xref="InterPro:IPR006011"
/translation="MRDRLADFQRRVVTDRFEEVELGPPVPAGFPQAIANSLDGRISL
VRRLLDELQSEIEALRRKQQHILALAVADPAEKDVLEDQIVKIRRKTSDLRKMVNEVD
NEFNEFARVCESAGEVRIRKNQIDSIRIKLRDLIICFNDTHADYRSRVSVRVRRQLRA
VGENVTEEEAEKIIDSAGRDELFFRQVNPLSVSAKAALADVKRRHNEIVELEKSIQTM
QEIFVDLQNLTEIQNEMVDNIAQNVESTKDHVEQGARNVKIGLEYKKSATRKKIMVAL
FVVILILLLIVAAIILAVVLSNHK"
assembly_gap 1098695..1099141
/estimated_length=447
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1102623..1102878
/estimated_length=256
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1103597..1103696
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1105016..1109315)
/locus_tag="NECAME_01174"
mRNA complement(join(1105016..1105081,1105156..1105245,
1105295..1105427,1105481..1105582,1105804..1105899,
1105978..1106094,1106156..1106255,1106321..1106483,
1107090..1107222,1107287..1107351,1107446..1107637,
1107732..1107894,1107953..1108077,1108139..1108255,
1108415..1108493,1108551..1108640,1108708..1108803,
1109038..1109165,1109235..1109315))
/locus_tag="NECAME_01174"
/product="putative prolyl endopeptidase"
CDS complement(join(1105016..1105081,1105156..1105245,
1105295..1105427,1105481..1105582,1105804..1105899,
1105978..1106094,1106156..1106255,1106321..1106483,
1107090..1107222,1107287..1107351,1107446..1107637,
1107732..1107894,1107953..1108077,1108139..1108255,
1108415..1108493,1108551..1108640,1108708..1108803,
1109038..1109165,1109235..1109315))
/locus_tag="NECAME_01174"
/inference="protein motif:HMMPfam:IPR001375"
/inference="protein motif:HMMPfam:IPR004106"
/note="KEGG: bmy:Bm1_13815 prolyl oligopeptidase family
protein; K01322 prolyl oligopeptidase 1.5e-221"
/codon_start=1
/product="putative prolyl endopeptidase"
/protein_id="ETN69064.1"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR004106"
/translation="MSTKISPSVYPSPRRDETIVDDFHGTKVTDPYRWMEDPDADETR
QFVDDLNTISAPFIAGAPSREKIRERLTELWDYEKYSCPSKRGDFYYYSYNSGLQNQY
VIYQQKSIKETGEVFLDPNTMSEDGTTSIRISAWTKDGSIFAYGLSEKGSDWVTIKFR
GADKKDLRDVITGVKHSCISWLKDNSGVFYCKYPDHRSATEGTSVEKHKYHSLYFHRM
GTDCKEDVLVYDRRDNADYMIGGTVTEDGKYLIIDVSRGCDPYNMLYYYDLSAIKHGI
GKITPTPLFDKLDAKYDYVDHDDETMLIHTNHNAPMFKLIRVSLKDKSLKELVPENPR
HKMDWASPVAGDRLVICYIEDVKDALYVYDLDTGSRFYQFPLKIGSLSGFFSKKSLDE
MFFGFESFTVPTIIYRVDFTSVNKKSVPEVKELRRVRIKGMDENQFSIEQVFFTSKDG
TKVPMYIISLKGTPRDGNNPTLLNGYGGFNIADMPYFSISRLLVVKHFRGIIACANLR
GGSEYGENWHMGGMREKKQNVFNDFISAAEYLIENKYTCRDKLAIHGGSNGGLLVAAC
SQQRPDLYGAVLNRVGVMDMLRFHRFTVGGAWVPEYGDPDIPNDFEFIYKYSPLHNIR
FPADGQWPATLMMTADHDDRVVPSHTLKYAATLMEKAKLHSPQTNPILVRVEVKAGHG
AGKPTKKVIAEIVDMYSFLQRVLNVEWTD"
gene complement(1113517..1118959)
/locus_tag="NECAME_01175"
mRNA complement(join(1113517..1113715,1114070..1114247,
1114303..1114398,1114471..1114574,1114726..1114805,
1114867..1115009,1115090..1115226,1115314..1115465,
1115529..1115588,1116222..1116348,1116405..1116500,
1116575..1116722,1118494..1118571,1118649..1118775,
1118870..1118959))
/locus_tag="NECAME_01175"
/product="SH3 domain protein"
CDS complement(join(1113517..1113715,1114070..1114247,
1114303..1114398,1114471..1114574,1114726..1114805,
1114867..1115009,1115090..1115226,1115314..1115465,
1115529..1115588,1116222..1116348,1116405..1116500,
1116575..1116722,1118494..1118571,1118649..1118775,
1118870..1118959))
/locus_tag="NECAME_01175"
/inference="protein motif:HMMPfam:IPR000219"
/inference="protein motif:HMMPfam:IPR001452"
/codon_start=1
/product="SH3 domain protein"
/protein_id="ETN69065.1"
/db_xref="InterPro:IPR000219"
/db_xref="InterPro:IPR001452"
/translation="MTEAGLESLLEPNVVVAKAKYNFEGKNNDELTFFKNDMITITQQ
LEGGWWEGTINGKTGWFPSNYANIITEKDKLMRSKSVPNAAVLVNGVNAANGIAVSGD
VVSSNAARSQFRAEIMRDFIRAEESYVASVQRTHEDLLLPIRAAAILTPEDYAVLSCY
IEDIAALQKSTLYRLKEALSLEVSQQRIGGILISCAAELKRLLVAYCENHPKAVEVLN
EKMQEGHVDRGDVQRSCAVFKEMKALCEAVRKQKELQLELLYTGQVEGWASFEQRGRI
LYVSVAPVILDGVCDDRCLALFSKMLIVLEITLDVNSYRLLRKIPTNGLRVRCMENRG
GLVVGDMEIQISTWFDIERWLDAFARCENILIEETSIMTPPPIPQSYAVSNMHVLSPS
RKADISEMPLAERAVIGRKPSIGHNDLRLNHELEMILPDDADEPDLNTSNRRSLNDGS
KKLCFRVVPPHRNVLATSTSKKNVKMRKEVSVGEQHDAQLLRIIEAYCSGAVRAVPTA
ADCRPPQLIVAEDEKILVEEVIGDEVVIQEKSLVDTVYALKDQVMGLRQELASVSRAL
DREQRARRRLEEIVRRGSMNANSPVSTPRPTVEMNVSQ"
assembly_gap 1117213..1117722
/estimated_length=510
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1119946..1120045
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1120587..1120686
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1121214..1125875
/locus_tag="NECAME_01176"
mRNA join(1121214..1121403,1121594..1121663,1121753..1121920,
1121993..1122146,1122239..1122308,1122417..1122641,
1122707..1122866,1123051..1123150,1123205..1123327,
1123395..1123503,1123809..1123927,1123988..1124129,
1124439..1124522,1124592..1124792,1125048..1125140,
1125295..1125454,1125563..1125713,1125771..1125875)
/locus_tag="NECAME_01176"
/product="TBC domain protein"
CDS join(1121214..1121403,1121594..1121663,1121753..1121920,
1121993..1122146,1122239..1122308,1122417..1122641,
1122707..1122866,1123051..1123150,1123205..1123327,
1123395..1123503,1123809..1123927,1123988..1124129,
1124439..1124522,1124592..1124792,1125048..1125140,
1125295..1125454,1125563..1125713,1125771..1125875)
/locus_tag="NECAME_01176"
/inference="protein motif:HMMPfam:IPR000195"
/inference="protein motif:HMMPfam:IPR017442"
/codon_start=1
/product="TBC domain protein"
/protein_id="ETN69066.1"
/db_xref="InterPro:IPR000195"
/db_xref="InterPro:IPR017442"
/translation="MTLLGSAGFGAVVLLGIEEGRRTCANGLPVIPSSIRMLGRFEKI
KSIRHPSLCTYIELVRCTLVPNAVILICEHHDMSLSALLSTRRLTIGEIFHITWHIVE
GIAVLHDEGICVGILNSDSILIPEKKRDGLLDVRITQYAVSYISKDGADIQGALAHGF
SIAPEQLIIGTSSCGTTFKADVWAIGIVLLEMATGVLLRDVWSLKQYMTVLKCSMGRA
ERGSLFPPILKALQSASNKTRDVLELDEKLVEIIERCLSLLPSHRPSVSELLLAIPPV
EQNGDSTYFESVECLSGRIAASNSRKDWVLREMTVEDAFFLWRLCGSSAEAILVRNNI
ITLRHPLLTNPSIVVEDLRMFGNDETRKFFVKPGVVMLPDKNVREKLMSVPSMDVFLR
SFLASPGSTINHDDNLSVIVKEKDMVYQASRMRLISHLLNSRFYKLPELLSSVASDVP
PMRRADVWCALLDIRSSDELNFFQWNTIAVHVSDRQLDVDIPRCHQYEELMTSPAAHY
CLRRLLKAWLVSHSQYVYWQGCDSLAAPFLLLNFNTTALACLTAFIKKYLNNFFLKDN
SAIIQEQLAVFNHLLAFVDAKLYTRLASMDFYPELFAIPWFLTCFAHVLPIYKLFHVW
DQLLQRDSSFPLFIDLSMEVVVADSIAYYDRVPPSCAFRSHSIPNDCKGPPPRGLPCS
LQSLHYQELKKWHCPRISREEFAWRVSDQLIVAIDIRPQIEFGRGCVLRSINYPNVSD
LSLLNIAEPLRVAQRNQHPICIIGGKDVEITRKFSGDLVSMGIDGVCVLDEGFEAIRH
DTSLIHVPH"
gene 1130699..1131769
/locus_tag="NECAME_01177"
mRNA join(1130699..1130766,1130824..1130995,1131524..1131769)
/locus_tag="NECAME_01177"
/product="hypothetical protein"
CDS join(1130699..1130766,1130824..1130995,1131524..1131769)
/locus_tag="NECAME_01177"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69067.1"
/translation="MMTREQGLRDCLTDPYTEFFAKESLQHIMDPHQIHFNVSTTGGS
KKLYEDDHHASFQCTAPLFELPHSNPMNVLLYDMPPMRMYPSSSRSELEANTSTHLPA
VFPIPSATYLHQSHSPSEYIPNGYSPPPQDPVYAPKPSFQHLNPQIKPKKRIQVDLGL
L"
assembly_gap 1133806..1133905
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1134677..1140242)
/locus_tag="NECAME_01178"
mRNA complement(join(1134677..1134791,1138117..1138205,
1140135..1140242))
/locus_tag="NECAME_01178"
/product="hypothetical protein"
CDS complement(join(1134677..1134791,1138117..1138205,
1140135..1140242))
/locus_tag="NECAME_01178"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69068.1"
/translation="MGILTAIFPVMYPGRLFLLISVLIGSACRALYIPHDIHSYSILT
DPFDIGFEENYHRPRRIPVKIGYRPDKREFNADDLTLRFGKRSGDMAFHPNDLALRFG
R"
assembly_gap 1143350..1143867
/estimated_length=518
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1144890..1145215
/estimated_length=326
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1149427..1154576)
/locus_tag="NECAME_01179"
mRNA complement(join(1149427..1149431,1149491..1149654,
1150305..1150411,1150469..1150523,1150580..1150671,
1150737..1150910,1151740..1151844,1151900..1151997,
1152097..1152330,1152472..1152557,1152622..1152727,
1152783..1152877,1153040..1153194,1153265..1153373,
1153435..1153549,1153667..1153808,1154472..1154576))
/locus_tag="NECAME_01179"
/product="sodium/hydrogen exchanger 3"
CDS complement(join(1149427..1149431,1149491..1149654,
1150305..1150411,1150469..1150523,1150580..1150671,
1150737..1150910,1151740..1151844,1151900..1151997,
1152097..1152330,1152472..1152557,1152622..1152727,
1152783..1152877,1153040..1153194,1153265..1153373,
1153435..1153549,1153667..1153808,1154472..1154576))
/locus_tag="NECAME_01179"
/inference="protein motif:HMMPfam:IPR006153"
/codon_start=1
/product="sodium/hydrogen exchanger 3"
/protein_id="ETN69069.1"
/db_xref="InterPro:IPR006153"
/translation="MSTTNFFRLIVMMMFMVMTVMAKKDMTHLEMAAQRRAENIHRLD
SIILLTYISVLVVIVLTSWLFKHYRFMFVHETGLTLFYGLLIGFVIRYFDIGLLQSQT
LDVILKDRRMVDEPPDYLRLEVKPEGAPRVSFHYELMEGFYADKKKHNEQKIEQKSAF
SPEIFFNIMLPPIIFNAGYSLKKRHFFRNIGSILVFVFIGTTVSCFVTGAMMYVFTKI
FGMGFSFQELLFFGAVISATDPVTVISIFAEMNVEADLFALVFGESALNDAVAIVLSS
TIDNFSAADEVGSHEIAFALGKFAYIFFGSLLLGSMLGCGNALITKMTAIAEHPLLES
SLFILVSYISFLLGEVVGLTGKFVLSIRASLIAFSNTFLCICQLRLIIRIVSVLFCGI
SQAHYTYNNLSEESQHTTKQFFQMISFVLESFIFCYIGVSVFVANNQKWNIGFLIFAL
ISITAARAMFVYPLSFLLNLRRRPRLPLSYQHMLVFAGLRGAMAFALADRNTATDNRQ
IICSTTAAIVMVTVFFNGGMTSWMIDHLGIKHGYANERSRGDTDASLPAGEADDLRFA
GTPLTPSGSNPWDKAFLPRKWYNFDANFMKPLLTHATPSLEQTLPPICLPFARMFTSS
KQATATNNLSNDSSPSTSVNVAEG"
assembly_gap 1155448..1155547
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1156967..1157066
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1158333..1160781)
/locus_tag="NECAME_01180"
mRNA complement(join(1158333..1158416,1158470..1158799,
1158865..1158980,1159039..1159089,1159154..1159219,
1159574..1159639,1159710..1159775,1159847..1159903,
1159959..1160781))
/locus_tag="NECAME_01180"
/product="hypothetical protein"
CDS complement(join(1158333..1158416,1158470..1158799,
1158865..1158980,1159039..1159089,1159154..1159219,
1159574..1159639,1159710..1159775,1159847..1159903,
1159959..1160781))
/locus_tag="NECAME_01180"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69070.1"
/translation="MKFSRKSGHVQIEETLSPTAPSVANVEKTEKTPRARPPPVLPTR
QVRKRSGRISLPVTAETSISENSERSTISPLMTALRPAASSKLTAIAVNPNTAAPAVT
FSEQSNSLELTQNGASTVDNNGNVSSIVNSILDGSLCLRPNDPLLSSRSSSVPPSPGS
KSHSQWNTPDAGSSTPELVSGGKRARTRSVPPPPASGYSTVPVENSPNRGRSSISEAK
KREIELESVPSNLASSLKTDHDLTGEQPFVKKVKPGNRKRMLPPRKNVVSEQKLSPGG
SHDMSTYEATDSGLSDTGASMLDQLLPTDTTKLRTPPISSGAVLDRMVSADDAKNDTS
TSVGTSILDQLLPPDPNSEVAASVTSASSDARLQAKTSKISRTSDVPVLEQLQPHHST
IMSIKAAEQLEQFKLQAKLKEEKRKQLRMDEEQRRRERDGQRAIGGAGAEKGDVLRGD
SRNDTGSNRPPHHSSQGKEGPRDASREQPNESHRDHSHDSHGDNSSASGTPGNTSSPS
HNYVLTHEGAMLRRREQERRMRELAKDVDLTSQMELMANFEASF"
assembly_gap 1161531..1161630
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1162696..1167251)
/locus_tag="NECAME_01181"
mRNA complement(join(1162696..1162823,1162903..1162998,
1163100..1163208,1163273..1163560,1163672..1163935,
1163986..1164090,1164150..1164236,1164392..1164553,
1164608..1164757,1164809..1164907,1164963..1165078,
1165375..1165480,1165865..1165984,1166700..1166795,
1166847..1167017,1167090..1167251))
/locus_tag="NECAME_01181"
/product="Bromodomain protein"
CDS complement(join(1162696..1162823,1162903..1162998,
1163100..1163208,1163273..1163560,1163672..1163935,
1163986..1164090,1164150..1164236,1164392..1164553,
1164608..1164757,1164809..1164907,1164963..1165078,
1165375..1165480,1165865..1165984,1166700..1166795,
1166847..1167017,1167090..1167251))
/locus_tag="NECAME_01181"
/inference="protein motif:HMMPfam:IPR001487"
/codon_start=1
/product="Bromodomain protein"
/protein_id="ETN69071.1"
/db_xref="InterPro:IPR001487"
/translation="MTPVDDLCFRWSLGMSADVQRTLDAVSTSGEGDAAGTADDSAKK
AENPWASPRQEPVNGIVQPRVIPPMGKPTRHTNQLDYLLNTVLKDVMKHKHAWPFNVP
VDTVKLNLPDYHKVIRRPMDMKTIQKRLQNIYYFSAKECMEDFECVFRNCYLFNQMED
DVTIMCQNVENVYRDCLQNLPGEEVEIARPSSKRGPKSMRKGPSPALGGARKSASFVR
ASRESSIQKGAADSSSVLGDSDVPNVVEESSSGASLDVPISTSTLHPLKVQKGVKRKA
DTTTGVLIEEDSGKVPRRESSRPIKKPAHFIDYTQLPPRYKGKATESMKFCHKVLHEL
MGKKCKSFNWPFLVPVDVEGMNLSDYYDIVPNPMDLGTIKKKLDNKQYANAQEFAEDI
RLVCNNCFKYNPASDIIHQHGRSLLQAFNERWANLPIDEDVADTNVVATSCEVVDEED
ALESYLNSWENLKEKSLVFAESITSRLLEIREMKNKDAPQSAILEAVKSLEKLLTQTT
FTVPPYTPASTRTRRAPATHIKEDSPLSNGPATSVSTIPRRDLKRPAAAHTSSEPAKL
YCGRGRRPGSKNKPKVESSANGKPWKDDYEFDSGDEASHEPMSYDEKRQLSLDINKLP
GDKLSMVVSIIESREDLSDISPEEIEIDFETLKPVTLRDLEAFVAAALKRKPRKTVKS
DNETRKREIEDKIKKLGGTVSTQQSSKNAASTADASRHAVSRARSSSESSSGSSGSSS
SSSSDSSDSESG"
assembly_gap 1164283..1164382
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1177287..1177386
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1178071..1178170
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1183939..1184391
/estimated_length=453
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1185343..1188807
/locus_tag="NECAME_01182"
mRNA join(1185343..1185413,1187284..1187403,1187459..1187584,
1188543..1188651,1188733..1188807)
/locus_tag="NECAME_01182"
/product="hypothetical protein"
CDS join(1185343..1185413,1187284..1187403,1187459..1187584,
1188543..1188651,1188733..1188807)
/locus_tag="NECAME_01182"
/inference="protein motif:HMMPfam:IPR019365"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69072.1"
/db_xref="InterPro:IPR019365"
/translation="MGAAASGVSTQMQAEHDPNASFPWWVRFLAKGVGIIGGFLAIFF
GALGLFSLSATCIIAVLLQMVFGFLIIALEAPFCCMFIDFIEKLAQFSESRKHWHKAA
LYGAMGITPIIMCLELNTFLGSGMIFACGTIYGFMALGKKADRGTMMAAGDPAWSPQV
NQPSVS"
assembly_gap 1185491..1185712
/estimated_length=222
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene complement(1189612..1191209)
/locus_tag="NECAME_01183"
mRNA complement(join(1189612..1189683,1189746..1189811,
1190269..1190385,1190461..1190604,1190663..1190821,
1190877..1191010,1191080..1191209))
/locus_tag="NECAME_01183"
/product="Amidinotransferase"
CDS complement(join(1189612..1189683,1189746..1189811,
1190269..1190385,1190461..1190604,1190663..1190821,
1190877..1191010,1191080..1191209))
/locus_tag="NECAME_01183"
/codon_start=1
/product="Amidinotransferase"
/protein_id="ETN69073.1"
/translation="MSYSHAIVVAVPNSLKFPNKKSTLDADALRKQSEGLIETLREAG
VVVSEYCPENGSSVSSLLVGDAAIAIHGTILMCQPKKPGIPPSELRRILPKWCRTIEE
CPETIDGKSVVLEGGDVFFTGKEIFVGIRKNGTNFEGVKVVARVFCDHAVIPIHMSDK
AQSLKYYVSLVAPGILAIGTSKEAQNILKVLEAEAMLRYRIISVDDDDGVNCMLVNNR
LIFVQNRAAAKFTALQSNGLELWTVDVSDLLKAGAPLARHCLLIREMKSPKDFFS"
assembly_gap 1191986..1192085
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1194121..1197388
/locus_tag="NECAME_01184"
mRNA join(1194121..1194186,1194265..1194390,1194440..1194615,
1194673..1194810,1197253..1197388)
/locus_tag="NECAME_01184"
/product="ER lumen protein retaining receptor"
CDS join(1194121..1194186,1194265..1194390,1194440..1194615,
1194673..1194810,1197253..1197388)
/locus_tag="NECAME_01184"
/inference="protein motif:HMMPfam:IPR000133"
/note="KEGG: bmy:Bm1_52975 ER lumen protein retaining
receptor; K10949 ER lumen protein retaining receptor
2.1e-87"
/codon_start=1
/product="ER lumen protein retaining receptor"
/protein_id="ETN69074.1"
/db_xref="InterPro:IPR000133"
/translation="MNIFRLTADMSHLLAIFILLVKMWKTRSVSGISARSQILFAIVF
TARYLDLFTTFISTYNTVMKVFFIISSYGTLYLMLVKFRPTYEKESDSFRVELLLIPC
VLLSLLINHEFSTMEILWTFSIYLEAVAIMPQLFMLQATGSAETITAHYLFALGSYRA
LYLLNWIYRYYTESFFDPIATVAGVVQTVLYADFFYLYVTRVVRTRKAMELPI"
gene 1199075..1199674
/locus_tag="NECAME_01185"
mRNA join(1199075..1199207,1199273..1199340,1199395..1199487,
1199552..1199674)
/locus_tag="NECAME_01185"
/product="hypothetical protein"
CDS join(1199075..1199207,1199273..1199340,1199395..1199487,
1199552..1199674)
/locus_tag="NECAME_01185"
/inference="protein motif:HMMPfam:IPR017442"
/codon_start=1
/product="hypothetical protein"
/protein_id="ETN69075.1"
/db_xref="InterPro:IPR017442"
/translation="MGAQESANKRQEEVLDVDDEVPHSAAAYKLWSHIHPALRNKRIS
CTIFIRKLENSDGSLKYFENGIKLLKQLKHPNILKFVEGACAANDVSLVTERVQMLDL
SFKTMSFVEIQSGLRHILEAITFLHNKISKMFNSYL"
gene <1201875..1207545
/locus_tag="NECAME_01186"
mRNA join(<1201875..1201968,1202028..1202106,1202174..1202267,
1202350..1202490,1202584..1202727,1202781..1202979,
1203034..1203167,1203219..1203338,1207504..1207545)
/locus_tag="NECAME_01186"
/product="HEAT repeat protein"
CDS join(<1201875..1201968,1202028..1202106,1202174..1202267,
1202350..1202490,1202584..1202727,1202781..1202979,
1203034..1203167,1203219..1203338,1207504..1207545)
/locus_tag="NECAME_01186"
/codon_start=1
/product="HEAT repeat protein"
/protein_id="ETN69076.1"
/translation="ARRLCRLLLSRYVLLEPKSHSELYPGLLVPTEDGEGVLSRNYYC
AYMVPELVRLFRVRETAVRIALLSQFDRFARHVHRECLQGFITDEVVQGCHDSDSHLV
SASLRALATLVDILGAENVCPWHTTKKFGNGSPQRVRPSKSVLHISNSRTDRMNYNEN
AKSSDTRKSVLVDSPNNENEWLEEDKTDWNSDFSWSADWKDGDKSASVEDLDPDLPSE
VKETSKQRKPATFPVANSKKDSAFDPRKANIIGSEFEINVVPKKCIEDDLFADLTPNI
PTSTSLLEKLKDLQTTAHSVSPVSNISSKFAMLETSEDAGGWDDSEDISPINTTSNTS
TRTALNAFSNEDDE"
assembly_gap 1205071..1205460
/estimated_length=390
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1211509..1211608
/estimated_length=100
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
gene 1216615..1218293
/locus_tag="NECAME_01187"
mRNA join(1216615..1216863,1216929..1217082,1217260..1217417,
1218099..1218293)
/locus_tag="NECAME_01187"
/product="carbonate dehydratase, eukaryotic-type"
CDS join(1216615..1216863,1216929..1217082,1217260..1217417,
1218099..1218293)
/locus_tag="NECAME_01187"
/inference="protein motif:HMMPfam:IPR001148"
/codon_start=1
/product="carbonate dehydratase, eukaryotic-type"
/protein_id="ETN69077.1"
/db_xref="InterPro:IPR001148"
/translation="MGSKTLSLIKLKSNKLFQYLLTNDQRNVAVIGDGFEKWGVKQPY
IQGAGLKHRYRLVQFHFHWAQHDHLGSEHKIGGLHYPGELHLVHVRHDLTLPEAVRKP
DGIAVVGVFLVIGHDGSSTAAVSSVLENIIFPGNSSSVQGFRARPLLPAHTEAFYRYE
GSLTTPGCDEAVIWTVLADPIVTTRSQMKELRQVHSQEGGRFTHNYRPVQALNGRRIL
YRPSSFDKTFLCGGQQAISILTALLVMILGYLH"
gene complement(1219424..1229014)
/locus_tag="NECAME_01188"
mRNA complement(join(1219424..1219536,1219599..1219695,
1219781..1219831,1220925..1221067,1222017..1222098,
1222289..1222418,1227431..1227552,1227900..1227982,
1228724..1228815,1228995..1229014))
/locus_tag="NECAME_01188"
/product="LIM domain protein"
CDS complement(join(1219424..1219536,1219599..1219695,
1219781..1219831,1220925..1221067,1222017..1222098,
1222289..1222418,1227431..1227552,1227900..1227982,
1228724..1228815,1228995..1229014))
/locus_tag="NECAME_01188"
/inference="protein motif:HMMPfam:IPR001356"
/inference="protein motif:HMMPfam:IPR001781"
/codon_start=1
/product="LIM domain protein"
/protein_id="ETN69078.1"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR001781"
/translation="MIGVMQSAELVDLDEQSPTFCEATVRQQFSATAFRPVGSSTSPA
QAEEAVCAVCGYEIKDQFVLRVMSDSFHECCLRCVACNQNLSNSPTCFSKDGRLYCRE
DHSILFGRFCARCHGALASRDLVFRCQHATYHQQCFSCFYCHMQFKKGDEYLIVEGEI
VCRKDYHMLLQNHLHSMAGPPVLFDFESSESSRKTPKRPRTILNATQRKQFKAAFEKS
AKPCRKIREQLAKETGLSVRVVQMKKMQRKEESKRGSSALDSEGKSIEGEKSSDEENC
SDCDDLEMEHPEKPYPENPIEKLYHMHSTYFQFT"
assembly_gap 1222636..1223073
/estimated_length=438
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1231134..1231240
/estimated_length=107
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
assembly_gap 1233401..1233818
/estimated_length=418
/gap_type="within scaffold"
/linkage_evidence="paired-ends"
CONTIG join(ANCG01003521.1:1..4946,gap(314),ANCG01003522.1:1..2034,
gap(100),ANCG01003523.1:1..891,gap(100),ANCG01003524.1:1..1710,
gap(275),ANCG01003525.1:1..3055,gap(1151),ANCG01003526.1:1..1994,
gap(342),ANCG01003527.1:1..10007,gap(1071),ANCG01003528.1:1..1665,
gap(609),ANCG01003529.1:1..2274,gap(100),ANCG01003530.1:1..759,
gap(100),ANCG01003531.1:1..4684,gap(489),ANCG01003532.1:1..3205,
gap(134),ANCG01003533.1:1..1900,gap(100),ANCG01003534.1:1..673,
gap(495),ANCG01003535.1:1..1768,gap(945),ANCG01003536.1:1..1474,
gap(162),ANCG01003537.1:1..8270,gap(288),ANCG01003538.1:1..906,
gap(100),ANCG01003539.1:1..4551,gap(100),ANCG01003540.1:1..7284,
gap(100),ANCG01003541.1:1..3954,gap(693),ANCG01003542.1:1..9550,
gap(100),ANCG01003543.1:1..919,gap(100),ANCG01003544.1:1..561,
gap(608),ANCG01003545.1:1..2434,gap(527),ANCG01003546.1:1..3176,
gap(277),ANCG01003547.1:1..2798,gap(1332),ANCG01003548.1:1..1736,
gap(1241),ANCG01003549.1:1..1840,gap(100),ANCG01003550.1:1..5058,
gap(102),ANCG01003551.1:1..5428,gap(100),ANCG01003552.1:1..1902,
gap(100),ANCG01003553.1:1..9943,gap(950),ANCG01003554.1:1..14945,
gap(100),ANCG01003555.1:1..753,gap(100),ANCG01003556.1:1..1227,
gap(100),ANCG01003557.1:1..602,gap(244),ANCG01003558.1:1..590,
gap(515),ANCG01003559.1:1..591,gap(100),ANCG01003560.1:1..8098,
gap(100),ANCG01003561.1:1..2501,gap(100),ANCG01003562.1:1..16665,
gap(100),ANCG01003563.1:1..1486,gap(466),ANCG01003564.1:1..7231,
gap(100),ANCG01003565.1:1..1158,gap(370),ANCG01003566.1:1..5894,
gap(100),ANCG01003567.1:1..1677,gap(165),ANCG01003568.1:1..10471,
gap(100),ANCG01003569.1:1..7530,gap(100),ANCG01003570.1:1..2390,
gap(382),ANCG01003571.1:1..5615,gap(100),ANCG01003572.1:1..19351,
gap(386),ANCG01003573.1:1..720,gap(555),ANCG01003574.1:1..4847,
gap(100),ANCG01003575.1:1..1108,gap(325),ANCG01003576.1:1..2345,
gap(747),ANCG01003577.1:1..1383,gap(100),ANCG01003578.1:1..641,
gap(100),ANCG01003579.1:1..1067,gap(676),ANCG01003580.1:1..2029,
gap(782),ANCG01003581.1:1..5799,gap(653),ANCG01003582.1:1..11163,
gap(250),ANCG01003583.1:1..1856,gap(537),ANCG01003584.1:1..9952,
gap(100),ANCG01000036.1:1..2380,gap(114),ANCG01003585.1:1..21489,
gap(100),ANCG01003586.1:1..1047,gap(321),ANCG01003587.1:1..16407,
gap(100),ANCG01003588.1:1..25891,gap(100),ANCG01003589.1:1..6232,
gap(100),ANCG01003590.1:1..3846,gap(100),ANCG01003591.1:1..11785,
gap(185),ANCG01003592.1:1..5346,gap(100),ANCG01003593.1:1..748,
gap(571),ANCG01003594.1:1..1774,gap(171),ANCG01003595.1:1..3245,
gap(100),ANCG01000037.1:1..3053,gap(100),ANCG01003596.1:1..16276,
gap(100),ANCG01003597.1:1..3711,gap(846),ANCG01003598.1:1..1734,
gap(100),ANCG01003599.1:1..3644,gap(972),ANCG01003600.1:1..4353,
gap(100),ANCG01003601.1:1..4343,gap(241),ANCG01003602.1:1..4765,
gap(100),ANCG01003603.1:1..4794,gap(100),ANCG01003604.1:1..565,
gap(100),ANCG01003605.1:1..4483,gap(1463),ANCG01003606.1:1..6492,
gap(100),ANCG01003607.1:1..21558,gap(131),ANCG01003608.1:1..4256,
gap(161),ANCG01003609.1:1..9475,gap(100),ANCG01003610.1:1..11639,
gap(100),ANCG01003611.1:1..14734,gap(467),ANCG01003612.1:1..1763,
gap(100),ANCG01003613.1:1..14349,gap(1734),ANCG01003614.1:1..633,
gap(340),ANCG01003615.1:1..19425,gap(100),ANCG01003616.1:1..26743,
gap(165),ANCG01003617.1:1..9691,gap(223),ANCG01003618.1:1..1573,
gap(100),ANCG01003619.1:1..887,gap(1198),ANCG01003620.1:1..8235,
gap(100),ANCG01003621.1:1..11898,gap(211),ANCG01065183.1:1..5798,
gap(144),ANCG01003622.1:1..3577,gap(100),ANCG01003623.1:1..3165,
gap(100),ANCG01003624.1:1..8889,gap(195),ANCG01003625.1:1..2787,
gap(100),ANCG01003626.1:1..2033,gap(173),ANCG01003627.1:1..4254,
gap(100),ANCG01003628.1:1..3566,gap(100),ANCG01003629.1:1..3309,
gap(100),ANCG01003630.1:1..676,gap(180),ANCG01003631.1:1..11176,
gap(100),ANCG01003632.1:1..1095,gap(100),ANCG01003633.1:1..5991,
gap(100),ANCG01003634.1:1..15113,gap(100),ANCG01003635.1:1..3329,
gap(1063),ANCG01003636.1:1..4136,gap(100),ANCG01003637.1:1..1161,
gap(100),ANCG01003638.1:1..697,gap(530),ANCG01003639.1:1..555,
gap(476),ANCG01003640.1:1..2314,gap(139),ANCG01003641.1:1..6567,
gap(100),ANCG01003642.1:1..31488,gap(100),ANCG01065047.1:1..1623,
gap(315),ANCG01003643.1:1..882,gap(100),ANCG01003644.1:1..4204,
gap(792),ANCG01003645.1:1..1574,gap(1346),ANCG01003646.1:1..8435,
gap(100),ANCG01003647.1:1..5254,gap(100),ANCG01003648.1:1..16371,
gap(315),ANCG01003649.1:1..6843,gap(376),ANCG01003650.1:1..5871,
gap(100),ANCG01003651.1:1..12889,gap(100),ANCG01003652.1:1..4640,
gap(194),ANCG01003653.1:1..24794,gap(413),ANCG01003654.1:1..5617,
gap(100),ANCG01003655.1:1..10264,gap(475),ANCG01003656.1:1..1884,
gap(1375),ANCG01003657.1:1..9080,gap(100),ANCG01003658.1:1..6639,
gap(452),ANCG01003659.1:1..10108,gap(351),ANCG01003660.1:1..2256,
gap(1532),ANCG01003661.1:1..579,gap(100),ANCG01003662.1:1..1038,
gap(541),ANCG01003663.1:1..2321,gap(568),ANCG01003664.1:1..1988,
gap(188),ANCG01003665.1:1..2472,gap(100),ANCG01003666.1:1..2439,
gap(236),ANCG01003667.1:1..8437,gap(100),ANCG01003668.1:1..8493,
gap(100),ANCG01003669.1:1..15065,gap(100),ANCG01003670.1:1..7236,
gap(1585),ANCG01003671.1:1..6574,gap(1896),ANCG01003672.1:1..4034,
gap(776),ANCG01003673.1:1..3557,gap(363),ANCG01003674.1:1..7227,
gap(731),ANCG01003675.1:1..958,gap(713),ANCG01003676.1:1..7184,
gap(514),ANCG01003677.1:1..7124,gap(1085),ANCG01003678.1:1..6158,
gap(558),ANCG01003679.1:1..2275,gap(132),ANCG01003680.1:1..3227,
gap(252),ANCG01003681.1:1..5485,gap(396),ANCG01003682.1:1..4342,
gap(1375),ANCG01003683.1:1..7707,gap(1376),ANCG01003684.1:1..7217,
gap(100),ANCG01003685.1:1..8851,gap(1084),ANCG01003686.1:1..1665,
gap(108),ANCG01003687.1:1..1900,gap(100),ANCG01003688.1:1..1271,
gap(619),ANCG01003689.1:1..809,gap(100),ANCG01003690.1:1..23715,
gap(100),ANCG01003691.1:1..33642,gap(447),ANCG01003692.1:1..3481,
gap(256),ANCG01003693.1:1..718,gap(100),ANCG01003694.1:1..13516,
gap(510),ANCG01003695.1:1..2223,gap(100),ANCG01003696.1:1..541,
gap(100),ANCG01003697.1:1..13119,gap(100),ANCG01003698.1:1..9444,
gap(518),ANCG01003699.1:1..1022,gap(326),ANCG01003700.1:1..10232,
gap(100),ANCG01003701.1:1..1419,gap(100),ANCG01003702.1:1..4464,
gap(100),ANCG01003703.1:1..2652,gap(100),ANCG01003704.1:1..12904,
gap(100),ANCG01003705.1:1..684,gap(100),ANCG01003706.1:1..5768,
gap(453),ANCG01003707.1:1..1099,gap(222),ANCG01003708.1:1..6273,
gap(100),ANCG01003709.1:1..12985,gap(390),ANCG01003710.1:1..6048,
gap(100),ANCG01003711.1:1..11027,gap(438),ANCG01003712.1:1..8060,
gap(107),ANCG01003713.1:1..2160,gap(418),ANCG01003714.1:1..4067)
//