LOCUS KF371656 1478 bp DNA linear BCT 13-AUG-2013
DEFINITION Methylophaga sp. RS-MM3 16S ribosomal RNA gene, partial sequence.
ACCESSION KF371656
VERSION KF371656.1
KEYWORDS .
SOURCE Methylophaga sp. RS-MM3
ORGANISM Methylophaga sp. RS-MM3
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Piscirickettsiaceae; Methylophaga.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Isolation and identification of nitrate-reducing, denitrifying,
methylotrophic proteobacteria from the landfill leachate
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1478)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2013) Molecular Diagnostics, Centre
Bioengineering RAS, Prospekt 60-letya Oktyabrya, build.7-1, Moscow
117312, Russian Federation
COMMENT ##Assembly-Data-START##
Assembly Method :: BioEdit v. 7.0.9.0
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1478
/organism="Methylophaga sp. RS-MM3"
/mol_type="genomic DNA"
/strain="RS-MM3"
/isolation_source="landfill leachate"
/db_xref="taxon:1382986"
/country="Russia: Perm"
/collection_date="15-Mar-2013"
/collected_by="Alexander Saralov"
/identified_by="Boris Kuznetsov"
rRNA <1..>1478
/product="16S ribosomal RNA"
BASE COUNT 381 a 315 c 455 g 327 t
ORIGIN
1 gctcagattg aacgctggcg gcatgcctaa cacatgcaag tcgaacgatg attactagct
61 tgctagtatg attagtggcg gacgggtgag taatgtatag ggatctgcct gttagtgggg
121 gacaacagcc ggaaacggct gctaataccg catacgctct acggaggaaa gtgggggacc
181 ttcgggcctc acgctaacag atgagcctat atcagattag ctagttggtg gggtaagggc
241 ctaccaaggc gacgatctgt agctggtttg agagaatgat cagccacact gggactgaga
301 cacggcccag actcctacgg gaggcagcag tggggaatat tggacaatgg ggggaaccct
361 gatccagcaa tgccgcgtgt gtgaagaagg ccttcgggtt gtaaagcact ttaagttggg
421 aggaaaagct gcttgttaat agcgagtggt gttgacgtta ccaacagaat aagcaccggc
481 taactccgtg ccagcagccg cggtaatacg gagggtgcaa gcgttaatcg gaattactgg
541 gcgtaaagcg cgcgtaggcg gttatttaag tcagatgtga aatccccggg cttaacctgg
601 gaattgcatt tgagactgga tggctagagt gtggtagagg tgagtggaat ttcaggtgta
661 gcggtgaaat gcgtagatat ctgaaggaac atcagtggcg aaggcgactc actgggccat
721 tactgacgct gaggtgcgaa agcgtgggta gcaaacagga ttagataccc tggtagtcca
781 cgccctaaac gatgtcaact aggtgtatgg agaatatatt ctttgtgtat cgaagctaac
841 gcgataagtt gaccgcctgg ggagtacggt cgcaagacta aaactcaaat gaattgacgg
901 gggcccgcac aagcggtgga gcatgtggtt taattcgatg caacgcgaag aaccttacct
961 ggccttgaca tgtacggaag attttagaga tagaattgtg ccttcgggaa ccgtaacaca
1021 ggtgctgcat ggctgtcgtc agctcgtgtc gtgagatgtt gggttaagtc ccgcaacgag
1081 cgcaacccct gtccttagtt gccatcattt agttgggcac tctaaggaga ctgccggtga
1141 caaaccggag gaaggtgggg atgacgtcaa gtcatcatgg cccttatggc cagggctaca
1201 cacgtgctac aatgggcagt acaaagggtt gccaactcgc gagagtgcgc taatcccata
1261 aagctgttcg tagtccggat tggagtctgc aactcgactc catgaagtcg gaatcgctag
1321 taatcgcaga tcagcatgct gcggtgaata cgttcccggg ccttgtacac accgcccgtc
1381 acaccatggg agttggctgc aaaagaagta ggtagactaa ccttcgggag gtcgcttacc
1441 actttgtggt caatgactgg ggtgaagtcg taacaagg
//
LOCUS KF371657 1481 bp DNA linear BCT 13-AUG-2013
DEFINITION Castellaniella denitrificans strain RS-MT7 16S ribosomal RNA gene,
partial sequence.
ACCESSION KF371657
VERSION KF371657.1
KEYWORDS .
SOURCE Castellaniella denitrificans
ORGANISM Castellaniella denitrificans
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Alcaligenaceae; Castellaniella.
REFERENCE 1 (bases 1 to 1481)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Isolation and identification of nitrate-reducing, denitrifying,
methylotrophic proteobacteria from the landfill leachate
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1481)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2013) Molecular Diagnostics, Centre
Bioengineering RAS, Prospekt 60-letya Oktyabrya, build.7-1, Moscow
117312, Russian Federation
COMMENT ##Assembly-Data-START##
Assembly Method :: BioEdit v. 7.0.9.0
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1481
/organism="Castellaniella denitrificans"
/mol_type="genomic DNA"
/strain="RS-MT7"
/isolation_source="landfill leachate"
/db_xref="taxon:56119"
/country="Russia: Perm"
/collection_date="15-Mar-2013"
/collected_by="Alexander Saralov"
/identified_by="Boris Kuznetsov"
rRNA <1..>1481
/product="16S ribosomal RNA"
BASE COUNT 375 a 343 c 470 g 293 t
ORIGIN
1 ggctcagatt gaacgctagc gggatgcttt acacatgcaa gtcgaacggc agcgcgagaa
61 agcttgcttt cttggcggcg agtggcgaac gggtgagtaa tgtatcggaa cgtacccagt
121 agcgggggat aactacgcga aagcgtggct aataccgcat acgccctacg ggggaaaggg
181 ggggatcgca agacctctca ctattggagc ggccgatatc ggattagctg gttggtgggg
241 taaaggccta ccaaggcgac gatccgtagc tggtttgaga ggacgaccag ccacactggg
301 actgagacac ggcccagact cctacgggag gcagcagtgg ggaattttgg acaatggggg
361 aaaccctgat ccagccatcc cgcgtgtgcg atgaaggcct tcgggttgta aagcactttt
421 ggcagggaag aaacggcccg ggataatacc ctgggttaat gacggtacct gcagaataag
481 caccggctaa ctacgtgcca gcagccgcgg taatacgtag ggtgcaagcg ttaatcggaa
541 ttactgggcg taaagcgtgc gcaggcggtt cggaaagaaa ggtgtgaaat cccagggctt
601 aaccttggaa ctgcactttt aactaccggg ctagagtacg tcagaggggg gtagaattcc
661 acgtgtagca gtgaaatgcg tagagatgtg gaggaatacc gatggcgaag gcagccccct
721 gggatgatac tgacgctcat gcacgaaagc gtggggagca aacaggatta gataccctgg
781 tagtccacgc cctaaacgat gtcaactagc tgttggggtt tattaacctt agtagcgcag
841 ccaacgcgtg aagttgaccg cctggggagt acggtcgcaa gattaaaact caaaggaatt
901 gacggggacc cgcacaagcg gtggatgatg tggattaatt cgatgcaacg cgaaaaacct
961 tacctaccct tgacatgtct ggaatcccga agagatttgg gagtgctcgc aagagaaccg
1021 gaacacaggt gctgcatggc tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg
1081 caacgagcgc aacccttgcc attagttgct acatttagtt gggcactcta atgggactgc
1141 cggtgacaaa ccggaggaag gtggggatga cgtcaagtcc tcatggccct tatgggtagg
1201 gcttcacacg tcatacaatg gtcgggacag agggttgcca agccgcgagg tggagccaat
1261 ctcagaaacc cgatcgtagt ccggatcgca gtctgcaact cgactgcgtg aagtcggaat
1321 cgctagtaat cgcggatcag catgtcgcgg tgaatacgtt cccgggtctt gtacacaccg
1381 cccgtcacac catgggagtg ggtttcacca gaagtaggta gcctaaccgc aaggggggcg
1441 cttaccacgg tgagattcat gactggggtg aagtcgtaac a
//
LOCUS KF371658 1429 bp DNA linear BCT 13-AUG-2013
DEFINITION Methylobacterium hispanicum strain RS-MM6 16S ribosomal RNA gene,
partial sequence.
ACCESSION KF371658
VERSION KF371658.1
KEYWORDS .
SOURCE Methylobacterium hispanicum
ORGANISM Methylobacterium hispanicum
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Methylobacteriaceae; Methylobacterium.
REFERENCE 1 (bases 1 to 1429)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Isolation and identification of nitrate-reducing, denitrifying,
methylotrophic proteobacteria from the landfill leachate
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1429)
AUTHORS Saralov,A., Sharavin,D. and Kuznetsov,B.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2013) Molecular Diagnostics, Centre
Bioengineering RAS, Prospekt 60-letya Oktyabrya, build.7-1, Moscow
117312, Russian Federation
COMMENT ##Assembly-Data-START##
Assembly Method :: BioEdit v. 7.0.9.0
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1429
/organism="Methylobacterium hispanicum"
/mol_type="genomic DNA"
/strain="RS-MM6"
/isolation_source="landfill leachate"
/db_xref="taxon:270350"
/country="Russia: Perm"
/collection_date="15-Mar-2013"
/collected_by="Alexander Saralov"
/identified_by="Boris Kuznetsov"
rRNA <1..>1429
/product="16S ribosomal RNA"
BASE COUNT 333 a 349 c 469 g 277 t
ORIGIN
1 tggctcagag cgaacgctgg cggcaggctt aacacatgca agtcgaacgc atccttcggg
61 rtgagtggca gacgggtgag taacacgtgg gaacgtgccc tccggtctgg gataaccctg
121 ggaaactagg gctaataccg gatacgtgct ttggcagaaa ggtttactgc cggaggatcg
181 gcccgcgtct gattagctag ttggtggggt aacggcctac caaggcgacg atcagtagct
241 ggtctgagag gatgatcagc cacactggga ctgagacacg gcccagactc ctacgggagg
301 cagcagtggg gaatattgga caatgggcgc aagcctgatc cagccatgcc gcgtgagtga
361 tgacggcctt agggttgtaa agctcttttc tccgggacga taatgacggt accggaggaa
421 taagccccgg ctaacttcgt gccagcagcc gcggtaatac gaagggggct agcgttgctc
481 ggaatcactg ggcgtaaagg gcgcgtaggc ggcgttttaa gtcgggggtg aaagcctgtg
541 gctcaaccac agaatggcct tcgatactgg gacgcttgag tctggtagag gttggtggaa
601 ctgcgagtgt agaggtgaaa ttcgtagata ttcgcaagaa caccggtggc gaaggcggcc
661 aactggacca gtactgacgc tgaggcgcga aagcgtgggg agcaaacagg attagatacc
721 ctggtagtcc acgccgtaaa cgatgaatgc tagctgttgg ggtgcatgca ccgcagtagc
781 gcagctaacg cattaagcat tccgcctggg gagtacggtc gcaagattaa aactcaaagg
841 aattgacggg ggcccgcaca agcggtggag catgtggttt aattcgaagc aacgcgcaga
901 accttaccat cctttgacat ggcatgttac ctggagagat ccagggtcct cttcggaggc
961 gtgcacacag gtgctgcatg gctgtcgtca gctcgtgtcg tgagatgttg ggttaagtcc
1021 cgcaacgagc gcaacccacg tcctcagttg ccatcattca gttgggcact ctggggagac
1081 tgccggtgat aagccgcgag gaaggtgtgg atgacgtcaa gtcctcatgg cccttacggg
1141 atgggctaca cacgtgctac aatggcggtg acagtgggac gcgaaggggt gaccctgagc
1201 caatctccaa aagccgtctc agttcggatt gcactctgca actcgagtgc atgaaggcgg
1261 aatcgctagt aatcgtggat cagcatgcca cggtgaatac gttcccgggc cttgtacaca
1321 ccgcccgtca caccatggga gttggtctta cccgacggcg ctgcgccaac cgcaaggagg
1381 caggcgacca cggtagggtc agcgactggg gtgaagtcgt aacaaggta
//
LOCUS KF371659 1578 bp DNA linear INV 13-AUG-2013
DEFINITION Schmidingerothrix sp. 1 TS-2013 strain Chile1 18S ribosomal RNA
gene, partial sequence; macronuclear.
ACCESSION KF371659
VERSION KF371659.1
KEYWORDS .
SOURCE Schmidingerothrix salinarum
ORGANISM Schmidingerothrix salinarum
Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
Spirotrichea; Stichotrichia; Stichotrichida; Schmidingerotrichidae;
Schmidingerothrix.
REFERENCE 1 (bases 1 to 1578)
AUTHORS Stoeck,T. and Breiner,H.-W.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2013) Biology, University of Kaiserslautern,
Gottlieb-Daimler-Str., Kaiserslautern 67663, Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1578
/organism="Schmidingerothrix salinarum"
/macronuclear
/mol_type="genomic DNA"
/strain="Chile1"
/isolate="Zona2"
/isolation_source="solar saltern, 16% salt"
/db_xref="taxon:1339220"
/country="Chile"
/collection_date="20-Mar-2013"
/collected_by="Thorsten Stoeck"
/identified_by="Wilhelm Foissner"
/PCR_primers="fwd_name: euk82f, fwd_seq:
gaadctgygaayggctc, rev_name: u1517r, rev_seq:
acggctaccttgttacgactt"
rRNA <1..>1578
/product="18S ribosomal RNA"
BASE COUNT 415 a 313 c 410 g 440 t
ORIGIN
1 atttacatgg ataaccgtgg taattctaga gctaatacat gctgttaagc ctgactttta
61 ggaagggctg tatttattag ataacaaacc aatattcctt gtgtctattg tgatgactca
121 taataactga tcgaatcgca tggactttgt ccgcgataaa tcattcaagt ttctgcccca
181 tcagctttcg atggtagtgt attggactac catggctttc acgggtgacg gaggattagg
241 gttcgattcc ggagagggag cctgagaaac ggctaccaca tctaaggaag gcagcaggcg
301 cgtaaattac ccaatcctga ctcagggagg tagtgacaag aaataacgga ccgaggctca
361 cgcttcggga ttgcaatgag tagaatttaa acccctttac gaggatcaat tggagggcaa
421 gtctggtgcc agcagccgcg gtaattccag ctccaatagc gtatattaaa gttgttgcag
481 ttaaaaagct cgtagttgga tttctgggag gttgccgatg tcagcttgtt agcttgtgca
541 gacgcgacct cccatccttc tgttaacgat tcttggtatt cagttactgg tttcgggctc
601 agatatttta ccttgagaaa attagagtgt ttcaggcagg cttgcgccgg aatacattag
661 catggaataa tagaatagga ctttagtctc ctttgttggt ttgagggact gaagtaatga
721 ttaataggga tagttggggg cattagtatt taattgtcag aggtgaaatt ctcggatttg
781 ttaaagacta acttatgcga aagcatttgc caaggatgtt ttcattaatc aagaacgaaa
841 gttaggggat caaagacgat cagataccgt cctagtctta accataaact atgccgacta
901 gggatcggag gcgcgtttag tccgccttcg gcaccttatg agaaatcaaa gtctttgggt
961 tctgggggga gtatggtcgc aaggctgaaa cttaaaggaa ttgacggaag ggcaccacca
1021 ggagtggagc ttgcggctca atttgactca acacgggaaa acttaccagg tccagacata
1081 gtgaggattg acagattgat agctctttct tgattctatg ggtggtggtg catggccgtt
1141 cttagttggt ggagtgattt gtctggttaa ttccgttaac gaacgagacc ttagcctact
1201 aactagtcga ttcaacctcg gttgattccg acttcttaga gggactttgt gattaaacac
1261 aaggaagttt gaggcaataa caggtctgtg atgcccttag atgtcctggg ccgcacgcgt
1321 gctacactga cgcatacagc gagtacttcc cagctccgta aggcagctgg taatcagcaa
1381 tatgcgtcgt gatggggata gatctttgga attatagatc ttgaacgagg aattcctagt
1441 aagcgcaagt catcagcttg cgctgattaa gtccctgccc tttgtacaca ccgcccgtcg
1501 ctcctaccga tttcgagtgg ttcggtgaac cttttggact gcgtcgacct cggtcgatgt
1561 gggaaatcaa gtaaacca
//