LOCUS KA353394 1457 bp mRNA linear TSA 14-AUG-2012
DEFINITION TSA: Capra hircus a22999;55.Cahiskin mRNA sequence.
ACCESSION KA353394
VERSION KA353394.1
DBLINK BioProject: PRJNA170226
BioSample: SAMN01086905, SAMN01086906, SAMN01086907
Sequence Read Archive: SRR520145, SRR520147, SRR520148
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Capra hircus (goat)
ORGANISM Capra hircus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
Pecora; Bovidae; Caprinae; Capra.
REFERENCE 1 (bases 1 to 1457)
AUTHORS Xu,T., Liu,D., Guo,X., Wang,H. and Gao,X.
TITLE De novo transcriptome assembly and differential gene expression
profiling of three Capra hircus skin types during anagen phase of
the hair growth cycle
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1457)
AUTHORS Xu,T., Liu,D., Guo,X., Wang,H. and Gao,X.
TITLE Direct Submission
JOURNAL Submitted (27-JUL-2012) The Key Laboratory of Mammalian
Reproductive Biology and Biotechnology of the Ministry of
Education, Inner Mongolia University, Da Xue Xi Jie, Hohhot, Inner
Mongolia 010021, China
COMMENT ##Assembly-Data-START##
Assembly Method :: Inchworm (Trinity) 20111126
Assembly Name :: Goat anagen skin transcriptome assembly
Coverage :: 240
Sequencing Technology :: Illumina HiSeq
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1457
/organism="Capra hircus"
/mol_type="mRNA"
/db_xref="taxon:9925"
/tissue_type="skin"
BASE COUNT 368 a 291 c 336 g 462 t
ORIGIN
1 ccccaaccag ggattgaacc cacactccct gcattggaag cgtggagttt taaacactgg
61 acctaaaggg aagttgtgat actggggata tttaagcaga agctggttga gcatatatga
121 gggatattgt taaagatcat catcagatga acctgaagct ccttttagcc tggggagtag
181 catcctgtat cttgaatcaa cttcttgcct ttaccctgaa cagatagatg tcttggtttg
241 aagggcagca acttggatac atggctccac gctctactct gtgcagctgg gaattcagaa
301 ttgttttggt ttggatatgc atggataaaa ctgtgtaact cttcacttcc cacttgaata
361 aaagctggga ggttagacag acagaagtga ataactggat ctttgtcttc ttatgcatat
421 ggagacctgt ctatggatct ggatcaaatt tgctggcagg accattttct atactgaatc
481 ttcctcttgg aaggctttta tcctagacgg tctcaaccta ggcagttttc caaggaaggt
541 gatgagtcaa agagcattgg tttaaaagga ccatttctct tatttgacac ccggaaacca
601 aagctccaag agaaaagtgg acttgttcaa agtcatgcgg tagattgtat cagagctgtt
661 gaagctggag tgttctgatt ctggaccaca gatgtcctcc tgtgaagttt tatttttttg
721 gcacagttct ttggtaaact tgagtctgcc tttgtggttg gcatgtgtca ggggattagg
781 ttttttgctc agatgattca tgctggcagt ctgcattgtc cctgtgatct ctatgatggg
841 tttttaattc aagtgtgtac atacagatgt gcacaaaacc acacacacac acacgcacac
901 cgcaccacac tgaatccaca ggtgtataag ggtatcttaa gtgattcaca tttcactaat
961 ttaaggggaa agcatttttc aggaatggaa tctcacacgc tcagataata gttgtggctg
1021 gaaattttcc tttagctaaa ttctgcctca ggaagaatcc attattctag aaattaagtt
1081 atatatgttt ggagtaaaaa aggtgcttac cttcctccct gggcggggaa tgggaggagt
1141 tcaaggctgt actgtgaagt caccaagctc ttagagggct cctgccctgg agcccagtgt
1201 tactgacctt cttttccttc cacaaggcct gctggactaa gtcctttggc tctgggtagg
1261 ggccagatag atggaccgtc atgtgggcct gtaagccata cttgatctct gcatcgattt
1321 tctttttctt ttttttttat tgcgatcttg gtctcacaga attgttacct tgttctcact
1381 gaatgtgcct aatctttgca aattccattt acatccttgt ttttagtgtt gcgtgtgtat
1441 gaaactctat gtgcaag
//