LOCUS JX472259 990 bp DNA linear SYN 09-DEC-2012 DEFINITION Synthetic construct clone HXB2ENV_ins3bp env gene, partial sequence. ACCESSION JX472259 VERSION JX472259.1 KEYWORDS . SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 990) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Impact of Mutation Type and Amplicon Characteristics on Genetic Diversity Measures Generated Using a High-Resolution Melting Diversity Assay JOURNAL J Mol Diagn (2012) In press PUBMED 23178437 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 990) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ. School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD 21205, USA COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..990 /organism="synthetic construct" /mol_type="other DNA" /db_xref="taxon:32630" /clone="HXB2ENV_ins3bp" /note="lab-generated mutants of Human immunodeficiency virus 1 HXB2-K03455 subtype B created by site-directed mutagenesis" gene <1..>990 /gene="env" misc_difference 493..495 /gene="env" /note="mutagenesis site" /replace="" BASE COUNT 338 a 174 c 248 g 230 t ORIGIN 1 agtactgaag ggtcaaataa cactgaagga agtgacacaa tcaccctccc atgcagaata 61 aaacaaatta taaacatgtg gcagaaagta ggaaaagcaa tgtatgcccc tcccatcagt 121 ggacaaatta gatgttcatc aaatattaca gggctgctat taacaagaga tggtggtaat 181 agcaacaatg agtccgagat cttcagacct ggaggaggag atatgaggga caattggaga 241 agtgaattat ataaatataa agtagtaaaa attgaaccat taggagtagc acccaccaag 301 gcaaagagaa gagtggtgca gagagaaaaa agagcagtgg gaataggagc tttgttcctt 361 gggttcttgg gagcagcagg aagcactatg ggcgcagcct caatgacgct gacggtacag 421 gccagacaat tattgtctgg tatagtgcag cagcagaaca atttgctgag ggctattgag 481 gcgcaacagc ataacctgtt gcaactcaca gtctggggca tcaagcagct ccaggcaaga 541 atcctggctg tggaaagata cctaaaggat caacagctcc tggggatttg gggttgctct 601 ggaaaactca tttgcaccac tgctgtgcct tggaatgcta gttggagtaa taaatctctg 661 gaacagattt ggaatcacac gacctggatg gagtgggaca gagaaattaa caattacaca 721 agcttaatac actccttaat tgaagaatcg caaaaccagc aagaaaagaa tgaacaagaa 781 ttattggaat tagataaatg ggcaagtttg tggaattggt ttaacataac aaattggctg 841 tggtatataa aattattcat aatgatagta ggaggcttgg taggtttaag aatagttttt 901 gctgtacttt ctatagtgaa tagagttagg cagggatatt caccattatc gtttcagacc 961 cacctcccaa ccccgagggg acccgacagg //