LOCUS       JX472255                 987 bp    DNA     linear   SYN 09-DEC-2012
DEFINITION  Synthetic construct clone HXB2ENV_TtoC env gene, partial sequence.
ACCESSION   JX472255
VERSION     JX472255.1
KEYWORDS    .
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Impact of Mutation Type and Amplicon Characteristics on Genetic
            Diversity Measures Generated Using a High-Resolution Melting
            Diversity Assay
  JOURNAL   J Mol Diagn (2012) In press
   PUBMED   23178437
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 987)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ.
            School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD
            21205, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="synthetic construct"
                     /mol_type="other DNA"
                     /db_xref="taxon:32630"
                     /clone="HXB2ENV_TtoC"
                     /note="lab-generated mutants of Human immunodeficiency
                     virus 1 HXB2-K03455 subtype B created by site-directed
                     mutagenesis"
     gene            <1..>987
                     /gene="env"
     misc_difference 492
                     /gene="env"
                     /note="mutagenesis site"
                     /replace="t"
BASE COUNT          336 a          174 c          248 g          229 t
ORIGIN      
        1 agtactgaag ggtcaaataa cactgaagga agtgacacaa tcaccctccc atgcagaata
       61 aaacaaatta taaacatgtg gcagaaagta ggaaaagcaa tgtatgcccc tcccatcagt
      121 ggacaaatta gatgttcatc aaatattaca gggctgctat taacaagaga tggtggtaat
      181 agcaacaatg agtccgagat cttcagacct ggaggaggag atatgaggga caattggaga
      241 agtgaattat ataaatataa agtagtaaaa attgaaccat taggagtagc acccaccaag
      301 gcaaagagaa gagtggtgca gagagaaaaa agagcagtgg gaataggagc tttgttcctt
      361 gggttcttgg gagcagcagg aagcactatg ggcgcagcct caatgacgct gacggtacag
      421 gccagacaat tattgtctgg tatagtgcag cagcagaaca atttgctgag ggctattgag
      481 gcgcaacagc acctgttgca actcacagtc tggggcatca agcagctcca ggcaagaatc
      541 ctggctgtgg aaagatacct aaaggatcaa cagctcctgg ggatttgggg ttgctctgga
      601 aaactcattt gcaccactgc tgtgccttgg aatgctagtt ggagtaataa atctctggaa
      661 cagatttgga atcacacgac ctggatggag tgggacagag aaattaacaa ttacacaagc
      721 ttaatacact ccttaattga agaatcgcaa aaccagcaag aaaagaatga acaagaatta
      781 ttggaattag ataaatgggc aagtttgtgg aattggttta acataacaaa ttggctgtgg
      841 tatataaaat tattcataat gatagtagga ggcttggtag gtttaagaat agtttttgct
      901 gtactttcta tagtgaatag agttaggcag ggatattcac cattatcgtt tcagacccac
      961 ctcccaaccc cgaggggacc cgacagg
//