LOCUS JX472255 987 bp DNA linear SYN 09-DEC-2012 DEFINITION Synthetic construct clone HXB2ENV_TtoC env gene, partial sequence. ACCESSION JX472255 VERSION JX472255.1 KEYWORDS . SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 987) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Impact of Mutation Type and Amplicon Characteristics on Genetic Diversity Measures Generated Using a High-Resolution Melting Diversity Assay JOURNAL J Mol Diagn (2012) In press PUBMED 23178437 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 987) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ. School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD 21205, USA COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..987 /organism="synthetic construct" /mol_type="other DNA" /db_xref="taxon:32630" /clone="HXB2ENV_TtoC" /note="lab-generated mutants of Human immunodeficiency virus 1 HXB2-K03455 subtype B created by site-directed mutagenesis" gene <1..>987 /gene="env" misc_difference 492 /gene="env" /note="mutagenesis site" /replace="t" BASE COUNT 336 a 174 c 248 g 229 t ORIGIN 1 agtactgaag ggtcaaataa cactgaagga agtgacacaa tcaccctccc atgcagaata 61 aaacaaatta taaacatgtg gcagaaagta ggaaaagcaa tgtatgcccc tcccatcagt 121 ggacaaatta gatgttcatc aaatattaca gggctgctat taacaagaga tggtggtaat 181 agcaacaatg agtccgagat cttcagacct ggaggaggag atatgaggga caattggaga 241 agtgaattat ataaatataa agtagtaaaa attgaaccat taggagtagc acccaccaag 301 gcaaagagaa gagtggtgca gagagaaaaa agagcagtgg gaataggagc tttgttcctt 361 gggttcttgg gagcagcagg aagcactatg ggcgcagcct caatgacgct gacggtacag 421 gccagacaat tattgtctgg tatagtgcag cagcagaaca atttgctgag ggctattgag 481 gcgcaacagc acctgttgca actcacagtc tggggcatca agcagctcca ggcaagaatc 541 ctggctgtgg aaagatacct aaaggatcaa cagctcctgg ggatttgggg ttgctctgga 601 aaactcattt gcaccactgc tgtgccttgg aatgctagtt ggagtaataa atctctggaa 661 cagatttgga atcacacgac ctggatggag tgggacagag aaattaacaa ttacacaagc 721 ttaatacact ccttaattga agaatcgcaa aaccagcaag aaaagaatga acaagaatta 781 ttggaattag ataaatgggc aagtttgtgg aattggttta acataacaaa ttggctgtgg 841 tatataaaat tattcataat gatagtagga ggcttggtag gtttaagaat agtttttgct 901 gtactttcta tagtgaatag agttaggcag ggatattcac cattatcgtt tcagacccac 961 ctcccaaccc cgaggggacc cgacagg //