LOCUS JX472251 989 bp DNA linear SYN 09-DEC-2012 DEFINITION Synthetic construct clone HXB2POL_del1bp pol gene, partial sequence. ACCESSION JX472251 VERSION JX472251.1 KEYWORDS . SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 989) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Impact of Mutation Type and Amplicon Characteristics on Genetic Diversity Measures Generated Using a High-Resolution Melting Diversity Assay JOURNAL J Mol Diagn (2012) In press PUBMED 23178437 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 989) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ. School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD 21205, USA COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..989 /organism="synthetic construct" /mol_type="other DNA" /db_xref="taxon:32630" /clone="HXB2POL_del1bp" /note="lab-generated mutants of Human immunodeficiency virus 1 HXB2-K03455 subtype B created by site-directed mutagenesis" gene <1..>989 /gene="pol" misc_difference 494^495 /gene="pol" /note="mutagenesis site" /replace="a" BASE COUNT 380 a 149 c 247 g 213 t ORIGIN 1 aaatgtcagc taaaaggaga agccatgcat ggacaagtag actgtagtcc aggaatatgg 61 caactagatt gtacacattt agaaggaaaa gttatcctgg tagcagttca tgtagccagt 121 ggatatatag aagcagaagt tattccagca gaaacagggc aggaaacagc atattttctt 181 ttaaaattag caggaagatg gccagtaaaa acaatacata ctgacaatgg cagcaatttc 241 accggtgcta cggttagggc cgcctgttgg tgggcgggaa tcaagcagga atttggaatt 301 ccctacaatc cccaaagtca aggagtagta gaatctatga ataaagaatt aaagaaaatt 361 ataggacagg taagagatca ggctgaacat cttaagacag cagtacaaat ggcagtattc 421 atccacaatt ttaaaagaaa aggggggatt ggggggtaca gtgcagggga aagaatagta 481 gacataatag caacgacata caaactaaag aattacaaaa acaaattaca aaaattcaaa 541 attttcgggt ttattacagg gacagcagaa atccactttg gaaaggacca gcaaagctcc 601 tctggaaagg tgaaggggca gtagtaatac aagataatag tgacataaaa gtagtgccaa 661 gaagaaaagc aaagatcatt agggattatg gaaaacagat ggcaggtgat gattgtgtgg 721 caagtagaca ggatgaggat tagaacatgg aaaagtttag taaaacacca tatgtatgtt 781 tcagggaaag ctaggggatg gttttataga catcactatg aaagccctca tccaagaata 841 agttcagaag tacacatccc actaggggat gctagattgg taataacaac atattggggt 901 ctgcatacag gagaaagaga ctggcatttg ggtcagggag tctccataga atggaggaaa 961 aagagatata gcacacaagt agaccctga //