LOCUS       JX472247                 993 bp    DNA     linear   SYN 09-DEC-2012
DEFINITION  Synthetic construct clone HXB2GAG_ins3bp gag gene, partial
            sequence.
ACCESSION   JX472247
VERSION     JX472247.1
KEYWORDS    .
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Impact of Mutation Type and Amplicon Characteristics on Genetic
            Diversity Measures Generated Using a High-Resolution Melting
            Diversity Assay
  JOURNAL   J Mol Diagn (2012) In press
   PUBMED   23178437
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 993)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ.
            School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD
            21205, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="synthetic construct"
                     /mol_type="other DNA"
                     /db_xref="taxon:32630"
                     /clone="HXB2GAG_ins3bp"
                     /note="lab-generated mutants of Human immunodeficiency
                     virus 1 HXB2-K03455 subtype B created by site-directed
                     mutagenesis"
     gene            <1..>993
                     /gene="gag"
     misc_difference 500..502
                     /gene="gag"
                     /note="mutagenesis site"
                     /replace=""
BASE COUNT          372 a          188 c          243 g          190 t
ORIGIN      
        1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc
       61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct
      121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata
      181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac
      241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct
      301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga
      361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg
      421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga
      481 ttaaataaaa tagtaagaaa catgtatagc cctaccagca ttctggacat aagacaagga
      541 ccaaaggaac cctttagaga ctatgtagac cggttctata aaactctaag agccgagcaa
      601 gcttcacagg aggtaaaaaa ttggatgaca gaaaccttgt tggtccaaaa tgcgaaccca
      661 gattgtaaga ctattttaaa agcattggga ccagcggcta cactagaaga aatgatgaca
      721 gcatgtcagg gagtaggagg acccggccat aaggcaagag ttttggctga agcaatgagc
      781 caagtaacaa attcagctac cataatgatg cagagaggca attttaggaa ccaaagaaag
      841 attgttaagt gtttcaattg tggcaaagaa gggcacacag ccagaaattg cagggcccct
      901 aggaaaaagg gctgttggaa atgtggaaag gaaggacacc aaatgaaaga ttgtactgag
      961 agacaggcta attttttagg gaagatctgg cct
//