LOCUS       JX472246                 999 bp    DNA     linear   SYN 09-DEC-2012
DEFINITION  Synthetic construct clone HXB2GAG_ins9bp gag gene, partial
            sequence.
ACCESSION   JX472246
VERSION     JX472246.1
KEYWORDS    .
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Impact of Mutation Type and Amplicon Characteristics on Genetic
            Diversity Measures Generated Using a High-Resolution Melting
            Diversity Assay
  JOURNAL   J Mol Diagn (2012) In press
   PUBMED   23178437
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 999)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ.
            School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD
            21205, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="synthetic construct"
                     /mol_type="other DNA"
                     /db_xref="taxon:32630"
                     /clone="HXB2GAG_ins9bp"
                     /note="lab-generated mutants of Human immunodeficiency
                     virus 1 HXB2-K03455 subtype B created by site-directed
                     mutagenesis"
     gene            <1..>999
                     /gene="gag"
     misc_difference 500..508
                     /gene="gag"
                     /note="mutagenesis site"
                     /replace=""
BASE COUNT          374 a          191 c          243 g          191 t
ORIGIN      
        1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc
       61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct
      121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata
      181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac
      241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct
      301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga
      361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg
      421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga
      481 ttaaataaaa tagtaagaaa cacctcaatg tatagcccta ccagcattct ggacataaga
      541 caaggaccaa aggaaccctt tagagactat gtagaccggt tctataaaac tctaagagcc
      601 gagcaagctt cacaggaggt aaaaaattgg atgacagaaa ccttgttggt ccaaaatgcg
      661 aacccagatt gtaagactat tttaaaagca ttgggaccag cggctacact agaagaaatg
      721 atgacagcat gtcagggagt aggaggaccc ggccataagg caagagtttt ggctgaagca
      781 atgagccaag taacaaattc agctaccata atgatgcaga gaggcaattt taggaaccaa
      841 agaaagattg ttaagtgttt caattgtggc aaagaagggc acacagccag aaattgcagg
      901 gcccctagga aaaagggctg ttggaaatgt ggaaaggaag gacaccaaat gaaagattgt
      961 actgagagac aggctaattt tttagggaag atctggcct
//