LOCUS       JX472245                 989 bp    DNA     linear   SYN 09-DEC-2012
DEFINITION  Synthetic construct clone HXB2GAG_del1bp gag gene, partial
            sequence.
ACCESSION   JX472245
VERSION     JX472245.1
KEYWORDS    .
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Impact of Mutation Type and Amplicon Characteristics on Genetic
            Diversity Measures Generated Using a High-Resolution Melting
            Diversity Assay
  JOURNAL   J Mol Diagn (2012) In press
   PUBMED   23178437
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ.
            School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD
            21205, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="synthetic construct"
                     /mol_type="other DNA"
                     /db_xref="taxon:32630"
                     /clone="HXB2GAG_del1bp"
                     /note="lab-generated mutants of Human immunodeficiency
                     virus 1 HXB2-K03455 subtype B created by site-directed
                     mutagenesis"
     gene            <1..>989
                     /gene="gag"
     misc_difference 497^498
                     /gene="gag"
                     /note="mutagenesis site"
                     /replace="a"
BASE COUNT          369 a          187 c          243 g          190 t
ORIGIN      
        1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc
       61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct
      121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata
      181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac
      241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct
      301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga
      361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg
      421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga
      481 ttaaataaaa tagtaagatg tatagcccta ccagcattct ggacataaga caaggaccaa
      541 aggaaccctt tagagactat gtagaccggt tctataaaac tctaagagcc gagcaagctt
      601 cacaggaggt aaaaaattgg atgacagaaa ccttgttggt ccaaaatgcg aacccagatt
      661 gtaagactat tttaaaagca ttgggaccag cggctacact agaagaaatg atgacagcat
      721 gtcagggagt aggaggaccc ggccataagg caagagtttt ggctgaagca atgagccaag
      781 taacaaattc agctaccata atgatgcaga gaggcaattt taggaaccaa agaaagattg
      841 ttaagtgttt caattgtggc aaagaagggc acacagccag aaattgcagg gcccctagga
      901 aaaagggctg ttggaaatgt ggaaaggaag gacaccaaat gaaagattgt actgagagac
      961 aggctaattt tttagggaag atctggcct
//