LOCUS JX472245 989 bp DNA linear SYN 09-DEC-2012 DEFINITION Synthetic construct clone HXB2GAG_del1bp gag gene, partial sequence. ACCESSION JX472245 VERSION JX472245.1 KEYWORDS . SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 989) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Impact of Mutation Type and Amplicon Characteristics on Genetic Diversity Measures Generated Using a High-Resolution Melting Diversity Assay JOURNAL J Mol Diagn (2012) In press PUBMED 23178437 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 989) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ. School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD 21205, USA COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..989 /organism="synthetic construct" /mol_type="other DNA" /db_xref="taxon:32630" /clone="HXB2GAG_del1bp" /note="lab-generated mutants of Human immunodeficiency virus 1 HXB2-K03455 subtype B created by site-directed mutagenesis" gene <1..>989 /gene="gag" misc_difference 497^498 /gene="gag" /note="mutagenesis site" /replace="a" BASE COUNT 369 a 187 c 243 g 190 t ORIGIN 1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc 61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct 121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata 181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac 241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct 301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga 361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg 421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga 481 ttaaataaaa tagtaagatg tatagcccta ccagcattct ggacataaga caaggaccaa 541 aggaaccctt tagagactat gtagaccggt tctataaaac tctaagagcc gagcaagctt 601 cacaggaggt aaaaaattgg atgacagaaa ccttgttggt ccaaaatgcg aacccagatt 661 gtaagactat tttaaaagca ttgggaccag cggctacact agaagaaatg atgacagcat 721 gtcagggagt aggaggaccc ggccataagg caagagtttt ggctgaagca atgagccaag 781 taacaaattc agctaccata atgatgcaga gaggcaattt taggaaccaa agaaagattg 841 ttaagtgttt caattgtggc aaagaagggc acacagccag aaattgcagg gcccctagga 901 aaaagggctg ttggaaatgt ggaaaggaag gacaccaaat gaaagattgt actgagagac 961 aggctaattt tttagggaag atctggcct //