LOCUS       JX472243                 990 bp    DNA     linear   SYN 09-DEC-2012
DEFINITION  Synthetic construct clone HXB2GAG_AtoT gag gene, partial sequence.
ACCESSION   JX472243
VERSION     JX472243.1
KEYWORDS    .
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Impact of Mutation Type and Amplicon Characteristics on Genetic
            Diversity Measures Generated Using a High-Resolution Melting
            Diversity Assay
  JOURNAL   J Mol Diagn (2012) In press
   PUBMED   23178437
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 990)
  AUTHORS   Cousins,M.M., Donnell,D. and Eshleman,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ.
            School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD
            21205, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="synthetic construct"
                     /mol_type="other DNA"
                     /db_xref="taxon:32630"
                     /clone="HXB2GAG_AtoT"
                     /note="lab-generated mutants of Human immunodeficiency
                     virus 1 HXB2-K03455 subtype B created by site-directed
                     mutagenesis"
     gene            <1..>990
                     /gene="gag"
     misc_difference 498
                     /gene="gag"
                     /note="mutagenesis site"
                     /replace="a"
BASE COUNT          369 a          187 c          243 g          191 t
ORIGIN      
        1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc
       61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct
      121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata
      181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac
      241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct
      301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga
      361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg
      421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga
      481 ttaaataaaa tagtaagtat gtatagccct accagcattc tggacataag acaaggacca
      541 aaggaaccct ttagagacta tgtagaccgg ttctataaaa ctctaagagc cgagcaagct
      601 tcacaggagg taaaaaattg gatgacagaa accttgttgg tccaaaatgc gaacccagat
      661 tgtaagacta ttttaaaagc attgggacca gcggctacac tagaagaaat gatgacagca
      721 tgtcagggag taggaggacc cggccataag gcaagagttt tggctgaagc aatgagccaa
      781 gtaacaaatt cagctaccat aatgatgcag agaggcaatt ttaggaacca aagaaagatt
      841 gttaagtgtt tcaattgtgg caaagaaggg cacacagcca gaaattgcag ggcccctagg
      901 aaaaagggct gttggaaatg tggaaaggaa ggacaccaaa tgaaagattg tactgagaga
      961 caggctaatt ttttagggaa gatctggcct
//