LOCUS JX472243 990 bp DNA linear SYN 09-DEC-2012 DEFINITION Synthetic construct clone HXB2GAG_AtoT gag gene, partial sequence. ACCESSION JX472243 VERSION JX472243.1 KEYWORDS . SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 990) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Impact of Mutation Type and Amplicon Characteristics on Genetic Diversity Measures Generated Using a High-Resolution Melting Diversity Assay JOURNAL J Mol Diagn (2012) In press PUBMED 23178437 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 990) AUTHORS Cousins,M.M., Donnell,D. and Eshleman,S.H. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Dept. of Pathology, Johns Hopkins Univ. School of Medicine, 720 Rutland Ave., Ross 646, Baltimore, MD 21205, USA COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..990 /organism="synthetic construct" /mol_type="other DNA" /db_xref="taxon:32630" /clone="HXB2GAG_AtoT" /note="lab-generated mutants of Human immunodeficiency virus 1 HXB2-K03455 subtype B created by site-directed mutagenesis" gene <1..>990 /gene="gag" misc_difference 498 /gene="gag" /note="mutagenesis site" /replace="a" BASE COUNT 369 a 187 c 243 g 191 t ORIGIN 1 aaaagtaaga aaaaagcaca gcaagcagca gctgacacag gacacagcaa tcaggtcagc 61 caaaattacc ctatagtgca gaacatccag gggcaaatgg tacatcaggc catatcacct 121 agaactttaa atgcatgggt aaaagtagta gaagagaagg ctttcagccc agaagtgata 181 cccatgtttt cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac 241 acagtggggg gacatcaagc agccatgcaa atgttaaaag agaccatcaa tgaggaagct 301 gcagaatggg atagagtgca tccagtgcat gcagggccta ttgcaccagg ccagatgaga 361 gaaccaaggg gaagtgacat agcaggaact actagtaccc ttcaggaaca aataggatgg 421 atgacaaata atccacctat cccagtagga gaaatttata aaagatggat aatcctggga 481 ttaaataaaa tagtaagtat gtatagccct accagcattc tggacataag acaaggacca 541 aaggaaccct ttagagacta tgtagaccgg ttctataaaa ctctaagagc cgagcaagct 601 tcacaggagg taaaaaattg gatgacagaa accttgttgg tccaaaatgc gaacccagat 661 tgtaagacta ttttaaaagc attgggacca gcggctacac tagaagaaat gatgacagca 721 tgtcagggag taggaggacc cggccataag gcaagagttt tggctgaagc aatgagccaa 781 gtaacaaatt cagctaccat aatgatgcag agaggcaatt ttaggaacca aagaaagatt 841 gttaagtgtt tcaattgtgg caaagaaggg cacacagcca gaaattgcag ggcccctagg 901 aaaaagggct gttggaaatg tggaaaggaa ggacaccaaa tgaaagattg tactgagaga 961 caggctaatt ttttagggaa gatctggcct //