LOCUS JX290284 682 bp DNA linear VRL 30-MAY-2014 DEFINITION Human herpesvirus 8 isolate Lobak42 K1 glycoprotein (K1) gene, partial cds. ACCESSION JX290284 VERSION JX290284.1 KEYWORDS . SOURCE Human gammaherpesvirus 8 (Kaposi's sarcoma-associated herpesvirus) ORGANISM Human gammaherpesvirus 8 Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Rhadinovirus; Rhadinovirus humangamma8. REFERENCE 1 (bases 1 to 682) AUTHORS Betsem,E., Cassar,O., Afonso,P.V., Fontanet,A., Froment,A. and Gessain,A. TITLE Epidemiology and Genetic Variability of HHV-8/KSHV in Pygmy and Bantu Populations in Cameroon JOURNAL PLoS Negl Trop Dis 8 (5), E2851 (2014) PUBMED 24831295 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 682) AUTHORS Betsem,E. and Cassar,O. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Virology, Institut Pasteur, 28 Rue du Docteur Roux, Paris, Ile de France 75015, France FEATURES Location/Qualifiers source 1..682 /organism="Human gammaherpesvirus 8" /mol_type="genomic DNA" /isolate="Lobak42" /isolation_source="PBMC" /host="Homo sapiens" /db_xref="taxon:37296" /country="Cameroon" /collection_date="20-Jun-2008" /collected_by="E. Betsem" /note="subtype: A5" gene <1..>682 /gene="K1" CDS <1..>682 /gene="K1" /codon_start=1 /product="K1 glycoprotein" /protein_id="AFR77062.1" /translation="TRLMRLTNQSFTVTSIACNFTCVEQSRHRQSIRITWHAQPVLQT LCAQPSNTVTCGQHVALYCSTSGNNVTVWHLPNGRNETVSQTKYYNFMLTNQTEGCYT CPNGLSSRLSNRICFWARCANITPETHTVSVSSTTGFRKFITNRLVNANRATTHDVVV VKEAKSTNPHIEVPFLVFMTLVALIGTMCGILGTIIFAHCQKQRDSNKTVPQQLQDYY SLHDLCTED" BASE COUNT 204 a 150 c 131 g 197 t ORIGIN 1 actcggctta tgcgactgac gaaccaatca ttcactgtta ccagcattgc ctgcaatttt 61 acttgtgtgg aacagtctag gcatcgacag agcattagga ttacatggca tgcacaacct 121 gtcttacaaa ccttgtgtgc gcagccatca aacacagtca cttgtggtca gcatgttgct 181 ttgtattgtt ctacctctgg aaataatgtt accgtttggc atctaccaaa cggacgaaat 241 gaaaccgtgt cacaaactaa atactataat tttatgctga cgaaccaaac tgaggggtgt 301 tatacttgtc ctaacgggct gtcgtctcgc ctgtcaaatc gtatatgttt ttgggcgcgt 361 tgtgccaata taactccaga aactcatact gtatctgtca gcagtactac aggctttaga 421 aaattcatta ctaatagatt agtgaacgca aaccgtgcaa ccacacatga tgtagttgta 481 gtgaaagaag caaaatctac aaatccacat attgaagtgc cttttcttgt atttatgaca 541 ctcgtagctc tgataggaac catgtgtggt atcttaggaa ctattatctt tgcccattgt 601 caaaaacaac gtgactcaaa caaaacagtg ccacaacaat tgcaggatta ttattcccta 661 cacgatttgt gcacggaaga ct //