LOCUS       JX290284                 682 bp    DNA     linear   VRL 30-MAY-2014
DEFINITION  Human herpesvirus 8 isolate Lobak42 K1 glycoprotein (K1) gene,
            partial cds.
ACCESSION   JX290284
VERSION     JX290284.1
KEYWORDS    .
SOURCE      Human gammaherpesvirus 8 (Kaposi's sarcoma-associated herpesvirus)
  ORGANISM  Human gammaherpesvirus 8
            Viruses; Duplodnaviria; Heunggongvirae; Peploviricota;
            Herviviricetes; Herpesvirales; Orthoherpesviridae;
            Gammaherpesvirinae; Rhadinovirus; Rhadinovirus humangamma8.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Betsem,E., Cassar,O., Afonso,P.V., Fontanet,A., Froment,A. and
            Gessain,A.
  TITLE     Epidemiology and Genetic Variability of HHV-8/KSHV in Pygmy and
            Bantu Populations in Cameroon
  JOURNAL   PLoS Negl Trop Dis 8 (5), E2851 (2014)
   PUBMED   24831295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Betsem,E. and Cassar,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Virology, Institut Pasteur, 28 Rue du
            Docteur Roux, Paris, Ile de France 75015, France
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Human gammaherpesvirus 8"
                     /mol_type="genomic DNA"
                     /isolate="Lobak42"
                     /isolation_source="PBMC"
                     /host="Homo sapiens"
                     /db_xref="taxon:37296"
                     /country="Cameroon"
                     /collection_date="20-Jun-2008"
                     /collected_by="E. Betsem"
                     /note="subtype: A5"
     gene            <1..>682
                     /gene="K1"
     CDS             <1..>682
                     /gene="K1"
                     /codon_start=1
                     /product="K1 glycoprotein"
                     /protein_id="AFR77062.1"
                     /translation="TRLMRLTNQSFTVTSIACNFTCVEQSRHRQSIRITWHAQPVLQT
                     LCAQPSNTVTCGQHVALYCSTSGNNVTVWHLPNGRNETVSQTKYYNFMLTNQTEGCYT
                     CPNGLSSRLSNRICFWARCANITPETHTVSVSSTTGFRKFITNRLVNANRATTHDVVV
                     VKEAKSTNPHIEVPFLVFMTLVALIGTMCGILGTIIFAHCQKQRDSNKTVPQQLQDYY
                     SLHDLCTED"
BASE COUNT          204 a          150 c          131 g          197 t
ORIGIN      
        1 actcggctta tgcgactgac gaaccaatca ttcactgtta ccagcattgc ctgcaatttt
       61 acttgtgtgg aacagtctag gcatcgacag agcattagga ttacatggca tgcacaacct
      121 gtcttacaaa ccttgtgtgc gcagccatca aacacagtca cttgtggtca gcatgttgct
      181 ttgtattgtt ctacctctgg aaataatgtt accgtttggc atctaccaaa cggacgaaat
      241 gaaaccgtgt cacaaactaa atactataat tttatgctga cgaaccaaac tgaggggtgt
      301 tatacttgtc ctaacgggct gtcgtctcgc ctgtcaaatc gtatatgttt ttgggcgcgt
      361 tgtgccaata taactccaga aactcatact gtatctgtca gcagtactac aggctttaga
      421 aaattcatta ctaatagatt agtgaacgca aaccgtgcaa ccacacatga tgtagttgta
      481 gtgaaagaag caaaatctac aaatccacat attgaagtgc cttttcttgt atttatgaca
      541 ctcgtagctc tgataggaac catgtgtggt atcttaggaa ctattatctt tgcccattgt
      601 caaaaacaac gtgactcaaa caaaacagtg ccacaacaat tgcaggatta ttattcccta
      661 cacgatttgt gcacggaaga ct
//