LOCUS JX290278 682 bp DNA linear VRL 30-MAY-2014 DEFINITION Human herpesvirus 8 isolate BAD54 K1 glycoprotein (K1) gene, partial cds. ACCESSION JX290278 VERSION JX290278.1 KEYWORDS . SOURCE Human gammaherpesvirus 8 (Kaposi's sarcoma-associated herpesvirus) ORGANISM Human gammaherpesvirus 8 Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Rhadinovirus; Rhadinovirus humangamma8. REFERENCE 1 (bases 1 to 682) AUTHORS Betsem,E., Cassar,O., Afonso,P.V., Fontanet,A., Froment,A. and Gessain,A. TITLE Epidemiology and Genetic Variability of HHV-8/KSHV in Pygmy and Bantu Populations in Cameroon JOURNAL PLoS Negl Trop Dis 8 (5), E2851 (2014) PUBMED 24831295 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 682) AUTHORS Betsem,E. and Cassar,O. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Virology, Institut Pasteur, 28 Rue du Docteur Roux, Paris, Ile de France 75015, France FEATURES Location/Qualifiers source 1..682 /organism="Human gammaherpesvirus 8" /mol_type="genomic DNA" /isolate="BAD54" /isolation_source="PBMC" /host="Homo sapiens" /db_xref="taxon:37296" /country="Cameroon" /collection_date="07-Aug-2008" /collected_by="E. Betsem" /note="subtype: A5" gene <1..>682 /gene="K1" CDS <1..>682 /gene="K1" /codon_start=1 /product="K1 glycoprotein" /protein_id="AFR77056.1" /translation="TRLWRLTDQSFTVETITCNFTCVEQSGHRQSIWITWNAQPVLQT LCAQPSNTVTCGQHVTLYCSTSGNNVTVWHLPNGRNETVSQTKYYNFTLMNQTEGCYT CSNGLSSRLSNRICFWARCANITPETHTVSVSSTTGFRTFSTNSLVNIIHATTHDVVV VKEAKSTHPHIEVPFLVFMTLVALIGTMCGILGTIIFAHCQKQRDSNKTVPQQLQDYY SLHDLCTED" BASE COUNT 203 a 149 c 130 g 200 t ORIGIN 1 actcggcttt ggcgactgac ggaccaatca ttcactgttg agaccattac ctgcaatttt 61 acttgtgtgg aacaatctgg gcatcgacag agcatttgga ttacatggaa tgcacaacct 121 gtcttacaaa ccttgtgtgc acagccatca aacacagtca cttgtggtca gcatgttact 181 ttgtattgtt ctacctctgg aaataatgtt accgtttggc atctaccaaa cggacgaaat 241 gaaaccgtgt cacaaactaa atactataat tttacgctga tgaaccaaac tgaggggtgt 301 tatacttgtt ctaacgggct gtcgtctcgc ctgtcaaatc gtatatgttt ttgggcgcgt 361 tgtgccaata taactccaga aactcatact gtatctgtca gcagtactac aggctttaga 421 acattcagta ctaatagctt agtgaacata atccatgcaa ccacacatga tgtagttgta 481 gtgaaagaag caaaatctac acatccacat attgaagtgc cttttcttgt atttatgaca 541 ctcgtagctc tgataggaac catgtgtggt atcttaggaa ctattatctt tgcccattgt 601 caaaaacaac gtgactcaaa caaaacagtg ccacaacaat tgcaggatta ttattcccta 661 cacgatttgt gcacggaaga ct //