LOCUS       JX290260                1499 bp    RNA     linear   VRL 22-SEP-2012
DEFINITION  HIV-1 isolate 10RU6498 from Russia pol protein (pol) gene, partial
            cds.
ACCESSION   JX290260
VERSION     JX290260.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1499)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1499)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Department of Retroviruses, State Research
            Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
            region 630559, Russia
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Human immunodeficiency virus 1"
                     /mol_type="genomic RNA"
                     /isolate="10RU6498"
                     /host="Homo sapiens"
                     /db_xref="taxon:11676"
                     /country="Russia: Novosibirsk"
                     /collection_date="2010"
                     /note="subtype: CRF02_AG"
     gene            <1..>1499
                     /gene="pol"
     CDS             <1..>1499
                     /gene="pol"
                     /codon_start=1
                     /product="pol protein"
                     /protein_id="AFR77713.1"
                     /translation="FFRETLAFQQREARKFSSEQTRTISPTSRERGDGGRDNLLSAAG
                     AEGQGAISSFSFPQITLWQRPLVTVRIEGQLIEALLDTGADDTVLEDINLPGKWKPKM
                     IGGIGGFIKVRQYDQILMEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPI
                     ETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPIFAI
                     KKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLY
                     EDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRRKNPEIV
                     IYQYMDDLYVGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPD
                     KWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVTQLCKLLRGAKALTDIVTL
                     TEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEP"
BASE COUNT          571 a          262 c          327 g          338 t
ORIGIN      
        1 ttttttaggg agactttggc cttccaacaa agggaggcca ggaaattttc ctcagagcag
       61 accagaacca tcagccccac cagcagagag cgtggggatg ggggaagaga taacctcctc
      121 tccgcagcag gagccgargg acaaggggct atatcctcct ttagcttccc tcaaatcact
      181 ctttggcaac gacccttagt cacagtaaga atagagggac agctaataga agccctatta
      241 gacacaggag cagatgatac agtattagaa gacataaatt taccaggaaa atggaaacca
      301 aaaatgatag ggggaattgg aggctttatc aaagtaagac agtatgatca gatacttatg
      361 gaaatctgtg gaaaaaaggc cataggtaca gtattagtag gacctacacc tgtcaatata
      421 attgggcgaa atatgttaac ccagattggt tgtactttaa attttccaat aagtcctatt
      481 gaaactgtac cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca
      541 ttgacagaag aaaaaataaa agcattaaca gacatttgta cagaaatgga aaaggaagga
      601 aaaatttcaa aaattggacc tgaaaatcca tacaatactc ccatatttgc cataaagaaa
      661 aaagatagta ctaaatggag aaaattagtg gatttcagag aactcaataa gagaactcag
      721 gacttctggg aggtccaatt aggaatacct catccagcgg gattaaaaaa gaaaaaatca
      781 gtaacagtac tagatgtagg agatgcatat ttttcagtac ccttatatga agactttaga
      841 aagtataccg cattcactat acctagtgta aataatgaaa caccagggat tagatatcag
      901 tacaatgtgc ttccacaggg atggaaaggg tcaccagcaa tatttcaggc aagcatgaca
      961 aaaatcttag agccctttag aagaaaaaat ccagagatag taatttacca atatatggat
     1021 gatttgtatg tagggtctga cttagaaata gggcagcata gagcaaaaat agaggagtta
     1081 agagctcatc tattgagttg gggatttact acaccagaca aaaagcatca gaaagaacct
     1141 ccatttcttt ggatgggata tgaactccat cctgacaaat ggacagtcca gcctatacag
     1201 ctgccagaca aagacagctg gactgtcaat gatatacaga aattagtggg aaaactaaat
     1261 tgggcaagtc agatttatcc agggattaaa gtgacacaat tgtgtaaact cctcagggga
     1321 gccaaagcac tgacagatat agtgacactg actgaggaag cagaattaga attggcagag
     1381 aacagagaga ttctaaaaga accggtgcat ggagtatatt atgacccatc aaaagattta
     1441 gtagcagaaa tacagaaaca aggacaagac caatggacat atcaaattta tcaagagcc
//