LOCUS JX290254 1230 bp RNA linear VRL 22-SEP-2012 DEFINITION HIV-1 isolate 10RU6276 from Russia pol protein (pol) gene, partial cds. ACCESSION JX290254 VERSION JX290254.1 KEYWORDS . SOURCE Human immunodeficiency virus 1 (HIV-1) ORGANISM Human immunodeficiency virus 1 Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. REFERENCE 1 (bases 1 to 1230) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia JOURNAL Unpublished REFERENCE 2 (bases 1 to 1230) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region 630559, Russia FEATURES Location/Qualifiers source 1..1230 /organism="Human immunodeficiency virus 1" /mol_type="genomic RNA" /isolate="10RU6276" /host="Homo sapiens" /db_xref="taxon:11676" /country="Russia: Novosibirsk" /collection_date="2010" /note="subtype: CRF02_AG" gene <1..>1230 /gene="pol" CDS <1..>1230 /gene="pol" /codon_start=1 /product="pol protein" /protein_id="AFR77707.1" /translation="GQGAISSFSFPQITLWQRPLVTVRIEGQLIEALLDTGADDTVLE DIDLPGKWKPKMIGGIGGFIKVRQYDQILMEICGKKAIGTVLVGPTPVNIIGRNMLTQ IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIG PENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVL DVGDAYFSVPLHEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKI LEPFRRKNPEIVIXQYMDDLYVGSDLEIGQHRAKIEELRAHLLXWGFTTPDXKHQKEP PFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVTQLCKLL RGAKALTDIVTLTEEAEL" BASE COUNT 472 a 207 c 258 g 288 t ORIGIN 1 ggacaagggg ctatatcctc ctttagcttc cctcaaatca ctctttggca acgaccctta 61 gtcacagtaa gaatagaggg acagctaata gaagccctat tagacacagg agcagatgat 121 acagtattag aagacataga tttaccagga aaatggaaac caaaaatgat agggggaatt 181 ggaggcttta tcaaagtaag acagtatgat cagatactta tggaaatctg tggaaaaaag 241 gccataggta cagtattagt aggacctacc cctgtcaata taattgggcg aaatatgtta 301 acycagattg gttgtacttt aaattttcca ataagtccta ttgaaactgt accagtaaaa 361 ttaaagccag gaatggatgg cccaaaggtt aaacaatggc cattgacaga agaaaaaata 421 aaagcattaa cagacatttg tacagaaatg gaaaaggaag gaaaaatttc aaaaattgga 481 cctgaaaatc catacaatac tcccatattt gccataaaga aaaaagatag tactaaatgg 541 agaaaattag tggatttcag agaactcaat aagagaactc aggacttctg ggaagtccaa 601 ttaggaatac ctcatccagc gggattaaaa aagaacaaat cagtaacagt actagatgta 661 ggagatgcat atttttcagt acccttacat gaagacttta gaaagtatac tgcattcact 721 atacctagtg taaataatga aacaccaggg attagatatc agtacaatgt gcttccacag 781 ggatggaaag ggtcaccagc aatatttcar gcaagcatga caaaaatctt agagcccttt 841 agaagaaaaa atccagagat agtaatctrc caatatatgg atgatttgta tgtagggtct 901 gacttagaaa tagggcagca tagagcaaaa atagaggagt taagagctca tctattgaak 961 tggggattta ctacaccaga taamaagcat cagaaagaac ctccatttct ctggatggga 1021 tatgaactcc atcctgacaa atggacagtc cagcctatac agctgccaga caaagacagc 1081 tggactgtca atgatataca gaaattagtg ggaaaactaa attgggcaag tcagatttat 1141 ccagggatta aagtgacgca attgtgtaaa ctcctcaggg gagccaaagc actgacagat 1201 atagtgacac tgactgagga agcagaatta //