LOCUS       JX290254                1230 bp    RNA     linear   VRL 22-SEP-2012
DEFINITION  HIV-1 isolate 10RU6276 from Russia pol protein (pol) gene, partial
            cds.
ACCESSION   JX290254
VERSION     JX290254.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Department of Retroviruses, State Research
            Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
            region 630559, Russia
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Human immunodeficiency virus 1"
                     /mol_type="genomic RNA"
                     /isolate="10RU6276"
                     /host="Homo sapiens"
                     /db_xref="taxon:11676"
                     /country="Russia: Novosibirsk"
                     /collection_date="2010"
                     /note="subtype: CRF02_AG"
     gene            <1..>1230
                     /gene="pol"
     CDS             <1..>1230
                     /gene="pol"
                     /codon_start=1
                     /product="pol protein"
                     /protein_id="AFR77707.1"
                     /translation="GQGAISSFSFPQITLWQRPLVTVRIEGQLIEALLDTGADDTVLE
                     DIDLPGKWKPKMIGGIGGFIKVRQYDQILMEICGKKAIGTVLVGPTPVNIIGRNMLTQ
                     IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIG
                     PENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVL
                     DVGDAYFSVPLHEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKI
                     LEPFRRKNPEIVIXQYMDDLYVGSDLEIGQHRAKIEELRAHLLXWGFTTPDXKHQKEP
                     PFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVTQLCKLL
                     RGAKALTDIVTLTEEAEL"
BASE COUNT          472 a          207 c          258 g          288 t
ORIGIN      
        1 ggacaagggg ctatatcctc ctttagcttc cctcaaatca ctctttggca acgaccctta
       61 gtcacagtaa gaatagaggg acagctaata gaagccctat tagacacagg agcagatgat
      121 acagtattag aagacataga tttaccagga aaatggaaac caaaaatgat agggggaatt
      181 ggaggcttta tcaaagtaag acagtatgat cagatactta tggaaatctg tggaaaaaag
      241 gccataggta cagtattagt aggacctacc cctgtcaata taattgggcg aaatatgtta
      301 acycagattg gttgtacttt aaattttcca ataagtccta ttgaaactgt accagtaaaa
      361 ttaaagccag gaatggatgg cccaaaggtt aaacaatggc cattgacaga agaaaaaata
      421 aaagcattaa cagacatttg tacagaaatg gaaaaggaag gaaaaatttc aaaaattgga
      481 cctgaaaatc catacaatac tcccatattt gccataaaga aaaaagatag tactaaatgg
      541 agaaaattag tggatttcag agaactcaat aagagaactc aggacttctg ggaagtccaa
      601 ttaggaatac ctcatccagc gggattaaaa aagaacaaat cagtaacagt actagatgta
      661 ggagatgcat atttttcagt acccttacat gaagacttta gaaagtatac tgcattcact
      721 atacctagtg taaataatga aacaccaggg attagatatc agtacaatgt gcttccacag
      781 ggatggaaag ggtcaccagc aatatttcar gcaagcatga caaaaatctt agagcccttt
      841 agaagaaaaa atccagagat agtaatctrc caatatatgg atgatttgta tgtagggtct
      901 gacttagaaa tagggcagca tagagcaaaa atagaggagt taagagctca tctattgaak
      961 tggggattta ctacaccaga taamaagcat cagaaagaac ctccatttct ctggatggga
     1021 tatgaactcc atcctgacaa atggacagtc cagcctatac agctgccaga caaagacagc
     1081 tggactgtca atgatataca gaaattagtg ggaaaactaa attgggcaag tcagatttat
     1141 ccagggatta aagtgacgca attgtgtaaa ctcctcaggg gagccaaagc actgacagat
     1201 atagtgacac tgactgagga agcagaatta
//