LOCUS       JX290248                 987 bp    RNA     linear   VRL 22-SEP-2012
DEFINITION  HIV-1 isolate 11RU21n from Russia pol protein (pol) gene, partial
            cds.
ACCESSION   JX290248
VERSION     JX290248.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 987)
  AUTHORS   Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Department of Retroviruses, State Research
            Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
            region 630559, Russia
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Human immunodeficiency virus 1"
                     /mol_type="genomic RNA"
                     /isolate="11RU21n"
                     /host="Homo sapiens"
                     /db_xref="taxon:11676"
                     /country="Russia: Novokuznetsk"
                     /collection_date="2011"
                     /note="subtype: B"
     gene            <1..>987
                     /gene="pol"
     CDS             <1..>987
                     /gene="pol"
                     /codon_start=1
                     /product="pol protein"
                     /protein_id="AFR77701.1"
                     /translation="FFREDLAFPQGEAREFPSEQTRANSPTRGEFQVWGGDNNSLSEA
                     GAERQGQGQGTVSLSFPQITLWQRPVVTIKIGGQLKEALLDTGADDTVVEDMYLPGRW
                     KPKMIGGIGGFIKVRQYDQVPIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFP
                     ISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTP
                     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFS
                     VPLDPDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEP"
BASE COUNT          368 a          177 c          220 g          222 t
ORIGIN      
        1 ttttttaggg aagatctggc cttcccacaa ggggaggcca gggaatttcc ttcagagcag
       61 accagagcca acagccccac cagaggagag tttcaggttt ggggaggaga caacaactcc
      121 ctctcagaag caggagcaga aagacaggga cagggacaag gaactgtatc ccttagcttc
      181 cctcagatca ctctttggca acgacccgtc gtcacaataa agataggggg gcaactaaag
      241 gaagctctat tagacacagg agcagatgat acagtagtag aagacatgta tttgccagga
      301 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
      361 caggtaccca ttgaaatctg tgggcaaaag gctataggta cagtattagt aggacctaca
      421 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc
      481 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagagtt
      541 aaacaatggc cactgacaga agaaaaaata aaagcattaa tagaaatttg tacagaaatg
      601 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
      661 gctataaaga aaaaagacag tactaaatgg agaaaattag tagattttag agaacttaat
      721 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacacccagc agggttaaaa
      781 aagaataaat cagtgacagt actagatgtg ggtgatgcat atttttcagt tcccttagat
      841 ccagatttca gaaagtatac tgcatttacc atacctagta caaacaatga gacaccaggg
      901 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
      961 agtagcatga caaaaatctt agagcca
//