LOCUS JX290242 1372 bp RNA linear VRL 22-SEP-2012
DEFINITION HIV-1 isolate 10RU6629 from Russia pol protein (pol) gene, partial
cds.
ACCESSION JX290242
VERSION JX290242.1
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1372)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Direct Submission
JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research
Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
region 630559, Russia
FEATURES Location/Qualifiers
source 1..1372
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="10RU6629"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Russia: Moscow"
/collection_date="2010"
/note="subtype: B"
gene <1..>1372
/gene="pol"
CDS <1..>1372
/gene="pol"
/codon_start=1
/product="pol protein"
/protein_id="AFR77695.1"
/translation="FFRENLAFPQGEARKFPSEQTRANSPTRRELQVWGRENNSLSEA
GGDRQGTISFSFPQITLWQRPIVTIKVGGQLKEALLDTGADDTVLEEMSLPGKYKPKM
IGGIGGFIKVRQYDQIAIEICGHKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPI
ETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPVFAI
KKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPLD
QDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPEIV
IYQYMDDLYVGSDLEIGQHRTKIEELRSHLLKWGFTTPDKKHQKEPPFLWMGYELHPD
KWTVQPITLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDVVPL
TTEAELE"
BASE COUNT 525 a 240 c 293 g 313 t
ORIGIN
1 ttttttaggg aaaatctggc cttcccacaa ggggaggcca ggaaatttcc ttcagagcag
61 accagagcca acagccccac cagaagagag cttcaggttt ggggaagaga aaacaactcc
121 ctctcagaag caggagggga tagacaagga actatatcct tcagcttccc tcagatcact
181 ctttggcaac gacccatcgt cacaataaag gtaggggggc aactaaagga agctctatta
241 gatacaggag cagatgatac agtattagaa gaaatgagtt taccaggaaa atataaacca
301 aaaatgatag ggggaattgg aggttttatc aaagtaagac aatatgayca gatagccata
361 gaaatatgtg gacataaagc tataggtaca gtattagtag gacctacccc cgtcaacata
421 attggaagaa atctgttgac tcagcttggt tgcactttaa attttcccat aagtcctatt
481 gaaactgtac cagtaaaatt aaagccagga atggatggcc caagagttaa acaatggcca
541 ttgacagagg aaaaaataaa agcattaata gaaatttgta cagaaatgga aaaggaagga
601 aaaatttcaa aaattgggcc tgaaaaccca tataatactc cagtatttgc cataaagaaa
661 aaagacagta ctaaatggag aaaattagta gattttagag aacttaataa gagaactcaa
721 gacttctggg aagttcagtt aggaatacca catccctcag gattaaaaaa gaaaaaatca
781 gtaacagtac tggatgtggg tgatgcatat ttctcagttc cattagatca agatttcagg
841 aagtacactg catttaccat acctagtata aacaatgaga caccagggat tagataccag
901 tacaatgtgc ttccacaggg atggaaagga tcaccagcaa tattccagag tagcatgaca
961 agaatcttag agccttttag aaaacaaaat ccagaaatag tcatctatca gtacatggat
1021 gatttgtatg tagggtctga tttagaaata gggcaacata gaacaaaaat agaggagctg
1081 agatcacacc tgttgaagtg gggatttacc acaccagata aaaaacatca gaaagaacct
1141 ccatttcttt ggatgggtta tgaactccat cctgataaat ggacagtaca gcctataaca
1201 ctgccagaca aagacagctg gactgtcaat gacatacaga agttagtggg aaaattaaat
1261 tgggcaagtc agatttatcc agggattaaa gtaaggcaat tgtgtaaact ccttagggga
1321 gccaaagcac taacagatgt agtaccacta acaacagaag cagaattaga at
//