LOCUS JX290236 1341 bp RNA linear VRL 22-SEP-2012
DEFINITION HIV-1 isolate 10RU73m from Russia pol protein (pol) gene, partial
cds.
ACCESSION JX290236
VERSION JX290236.1
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE 1 (bases 1 to 1341)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1341)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Direct Submission
JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research
Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
region 630559, Russia
FEATURES Location/Qualifiers
source 1..1341
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="10RU73m"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Russia: Moscow"
/collection_date="2010"
/note="subtype: A1"
gene <1..>1341
/gene="pol"
CDS <1..>1341
/gene="pol"
/codon_start=1
/product="pol protein"
/protein_id="AFR77689.1"
/translation="REARKFSSEQTRAISPTSRDLWDGGRDNPLPETGTERQGTASSF
NFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKV
RQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVTLKPG
MDGPKVKQWPLTEEKIKALQEICKEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK
LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFT
IPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRSKNPEIVIYQYMDDLYV
GSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLP
DKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEAELE"
BASE COUNT 515 a 229 c 284 g 308 t
ORIGIN
1 agggaggcca ggaaattttc ctcagagcag accagagcca tcagccccac cagcagagat
61 ctttgggatg ggggaagaga taaccccctc cctgaaacag gaacagaaag acagggaaca
121 gcatcctcct tcaatttccc tcaaatcact ctttggcaac gaccccttgt cacaataaaa
181 ataggaggac agctaaaaga agctctatta gatacaggag cagatgatac agtattagaa
241 gaaataaatt tgccaggaaa atggaaacca aaaatgatag ggggaattgg aggttttatc
301 aaagtaagac agtatgatca gatacttata gaaatttgtg gaaaaaaggc tataggtacr
361 gtattagtag gacctacccc tgtcaacata attggaagaa atatgttgac tcagcttggt
421 tgtactttaa attttccaat aagtcctatt gaaactgtac cagtaacatt aaagccagga
481 atggatggcc caaaggttaa acaatggcca ttaacagaag agaaaataaa agcattacaa
541 gaaatttgta aggagatgga aaaggaagga aaaatttcaa aaattgggcc tgaaaatcca
601 tacaatactc cagtatttgc tataaagaaa aargacagca ctaagtggag raaattagta
661 gatttcaggg agctcaataa aagaactcag gacttttggg aagtycaatt aggaataccc
721 catccagcgg gtttaaaaaa gaaaaaatca gtaacagtac tagatgtggg ggatgcatat
781 ttttcagttc ctttagatga aagctttaga aagtatactg cattcactat accaagtata
841 aacaatgaga caccagggat cagatatcag tacaatgtac ttccacaggg atggaaagga
901 tcaccatcaa tattccagag tagcatgaca aaaatcttag agcccttyag atcaaaaaat
961 ccagaaatag ttatctatca atacatggat gatttgtatg taggctctga tttagaaata
1021 gggcaacata gaacaaaaat agaggagtta agagctcatc tattgagctg gggatttact
1081 acaccagaca aaaagcatca gaaagaacct ccatttcttt ggatgggata tgaactccat
1141 cctgacaaat ggacagtcca gcctataatg ctgccagata aagacagctg gactgtcaat
1201 gatatacaga aattagtggg aaaactaaat tgggcaagtc agatttatcc agggattaaa
1261 gtaaagcaat tgtgtaaact cctcagggga gccaaagcac tgacagatat agtgacactg
1321 actgaagaag cagaattaga a
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