LOCUS JX290236 1341 bp RNA linear VRL 22-SEP-2012 DEFINITION HIV-1 isolate 10RU73m from Russia pol protein (pol) gene, partial cds. ACCESSION JX290236 VERSION JX290236.1 KEYWORDS . SOURCE Human immunodeficiency virus 1 (HIV-1) ORGANISM Human immunodeficiency virus 1 Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. REFERENCE 1 (bases 1 to 1341) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia JOURNAL Unpublished REFERENCE 2 (bases 1 to 1341) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region 630559, Russia FEATURES Location/Qualifiers source 1..1341 /organism="Human immunodeficiency virus 1" /mol_type="genomic RNA" /isolate="10RU73m" /host="Homo sapiens" /db_xref="taxon:11676" /country="Russia: Moscow" /collection_date="2010" /note="subtype: A1" gene <1..>1341 /gene="pol" CDS <1..>1341 /gene="pol" /codon_start=1 /product="pol protein" /protein_id="AFR77689.1" /translation="REARKFSSEQTRAISPTSRDLWDGGRDNPLPETGTERQGTASSF NFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKV RQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVTLKPG MDGPKVKQWPLTEEKIKALQEICKEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFT IPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRSKNPEIVIYQYMDDLYV GSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLP DKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEAELE" BASE COUNT 515 a 229 c 284 g 308 t ORIGIN 1 agggaggcca ggaaattttc ctcagagcag accagagcca tcagccccac cagcagagat 61 ctttgggatg ggggaagaga taaccccctc cctgaaacag gaacagaaag acagggaaca 121 gcatcctcct tcaatttccc tcaaatcact ctttggcaac gaccccttgt cacaataaaa 181 ataggaggac agctaaaaga agctctatta gatacaggag cagatgatac agtattagaa 241 gaaataaatt tgccaggaaa atggaaacca aaaatgatag ggggaattgg aggttttatc 301 aaagtaagac agtatgatca gatacttata gaaatttgtg gaaaaaaggc tataggtacr 361 gtattagtag gacctacccc tgtcaacata attggaagaa atatgttgac tcagcttggt 421 tgtactttaa attttccaat aagtcctatt gaaactgtac cagtaacatt aaagccagga 481 atggatggcc caaaggttaa acaatggcca ttaacagaag agaaaataaa agcattacaa 541 gaaatttgta aggagatgga aaaggaagga aaaatttcaa aaattgggcc tgaaaatcca 601 tacaatactc cagtatttgc tataaagaaa aargacagca ctaagtggag raaattagta 661 gatttcaggg agctcaataa aagaactcag gacttttggg aagtycaatt aggaataccc 721 catccagcgg gtttaaaaaa gaaaaaatca gtaacagtac tagatgtggg ggatgcatat 781 ttttcagttc ctttagatga aagctttaga aagtatactg cattcactat accaagtata 841 aacaatgaga caccagggat cagatatcag tacaatgtac ttccacaggg atggaaagga 901 tcaccatcaa tattccagag tagcatgaca aaaatcttag agcccttyag atcaaaaaat 961 ccagaaatag ttatctatca atacatggat gatttgtatg taggctctga tttagaaata 1021 gggcaacata gaacaaaaat agaggagtta agagctcatc tattgagctg gggatttact 1081 acaccagaca aaaagcatca gaaagaacct ccatttcttt ggatgggata tgaactccat 1141 cctgacaaat ggacagtcca gcctataatg ctgccagata aagacagctg gactgtcaat 1201 gatatacaga aattagtggg aaaactaaat tgggcaagtc agatttatcc agggattaaa 1261 gtaaagcaat tgtgtaaact cctcagggga gccaaagcac tgacagatat agtgacactg 1321 actgaagaag cagaattaga a //