LOCUS JX290230 1308 bp RNA linear VRL 22-SEP-2012 DEFINITION HIV-1 isolate 10RU16m from Russia pol protein (pol) gene, partial cds. ACCESSION JX290230 VERSION JX290230.1 KEYWORDS . SOURCE Human immunodeficiency virus 1 (HIV-1) ORGANISM Human immunodeficiency virus 1 Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. REFERENCE 1 (bases 1 to 1308) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia JOURNAL Unpublished REFERENCE 2 (bases 1 to 1308) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region 630559, Russia FEATURES Location/Qualifiers source 1..1308 /organism="Human immunodeficiency virus 1" /mol_type="genomic RNA" /isolate="10RU16m" /host="Homo sapiens" /db_xref="taxon:11676" /country="Russia: Moscow" /collection_date="2010" /note="subtype: A1" gene <1..>1308 /gene="pol" CDS <1..>1308 /gene="pol" /codon_start=1 /product="pol protein" /protein_id="AFR77683.1" /translation="ARKFSSEQTRTISPTSRELWDRGRDNPLPETGTERQGTTASFNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQ YDQIPIEICGKKAIGTVLIGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVTLKPGMD GPKVKQWPLTEEKIKALIDICKEMEKEGKISKIGPGNPYNTPVFVIKKKDSTKWRKLV DFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIP SINNATPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRSKNPEIVIYQYMDDLYVGS DLEIGQHRTKIEELRAHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLPDK DSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRAKALTDIVT" BASE COUNT 501 a 228 c 276 g 303 t ORIGIN 1 gccaggaaat tttcctcaga gcagaccaga accatcagcc ccaccagcag agaactttgg 61 gataggggaa gagataaccc cctccctgaa acaggaacag aaagacaggg aacaacagcc 121 tccttcaatt tccctcaaat cactctttgg caacgacccc ttgtcacaat aaaaatagga 181 ggacagctaa aagaagctct attagataca ggggcagatg atacggtatt agaagacata 241 aatttgccag gaaaatggaa accaaaaatg atagggggaa ttggaggttt tatcaaggta 301 agacagtatg atcagatacc tatagaaatt tgtggaaaaa aggctatagg tacggtatta 361 atagggccta cccctgtcaa cataattggg agaaatatgt tgactcagct tggttgtact 421 ttaaattttc caataagccc tattgaaact gtaccagtaa cattaaagcc aggaatggat 481 ggcccaaagg ttaaacaatg gccattaaca gaagaaaaaa taaaagcatt aatagacatt 541 tgtaaagaga tggagaagga aggaaaaatt tcaaaaattg ggcctggaaa tccatataat 601 actccagtat ttgttataaa gaaaaaagat agcactaagt ggaggaaatt agtagatttc 661 agggagctca ataaaagaac tcaggacttt tgggaagttc aattaggaat accccatcca 721 gcgggtttaa aaaagaaaaa atcagtaaca gtactagatg tgggggatgc atatttttca 781 gttcctttag atgaaagctt cagaaaatat actgcattca ctataccaag tataaacaat 841 gcgacaccag ggatcaggta tcaatacaat gtactcccac agggatggaa aggatcacca 901 tcaatattcc agagtagcat gacaaaaatc ttagagccat ttagatcaaa aaatccagaa 961 atagttatct atcaatacat ggatgacttg tatgtaggct ctgatttaga aatagggcaa 1021 catagaacaa aaatagagga gttaagagct catctattaa ggtggggatt tactacacca 1081 gacaaaaagc atcagaaaga acctccgttt ctttggatgg gatatgaact ccatcctgac 1141 aaatggacag tccagcctat aatgctgcca gataaagaca gctggactgt caatgatata 1201 cagaaattag tgggaaaact aaattgggca agtcagattt atccagggat taaagtaaag 1261 caattgtgta aactcctcag ggccaaagca ctgacagata tagtgaca //