LOCUS JX290224 1217 bp RNA linear VRL 22-SEP-2012 DEFINITION HIV-1 isolate 10RU6818 from Russia pol protein (pol) gene, partial cds. ACCESSION JX290224 VERSION JX290224.1 KEYWORDS . SOURCE Human immunodeficiency virus 1 (HIV-1) ORGANISM Human immunodeficiency virus 1 Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. REFERENCE 1 (bases 1 to 1217) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia JOURNAL Unpublished REFERENCE 2 (bases 1 to 1217) AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M. TITLE Direct Submission JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region 630559, Russia FEATURES Location/Qualifiers source 1..1217 /organism="Human immunodeficiency virus 1" /mol_type="genomic RNA" /isolate="10RU6818" /host="Homo sapiens" /db_xref="taxon:11676" /country="Russia: Novosibirsk" /collection_date="2010" /note="subtype: A1" gene <1..>1217 /gene="pol" CDS <1..>1217 /gene="pol" /codon_start=1 /product="pol protein" /protein_id="AFR77677.1" /translation="SFNFPQITLWQRPLVTVRVGGQIKEALLDTGADDTVLEDIDLPG KWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLIGPTPVNIIGRNMLTQIGCTLN FPISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALIEICEEMEKEGKISKIGPENPYN TPVFVIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAY FSVPLDENFRKYTAFTIPSTNNETPGIRYQYMVLPQGWKGSPSIFQSSMTKILEPFRL KNPEIVIYQYMDDLYVGSDLEIGKHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMG YELHPDKWTVQPIMLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKAL TEIVTLTEEAELE" BASE COUNT 469 a 197 c 259 g 291 t ORIGIN 1 tccttcaatt tccctcaaat cactctttgg caacgacccc ttgtcacagt aagagtagga 61 ggacagataa aagaagctct attagataca ggagcagatg atacggtatt agaagacata 121 gatttgccag gaaaatggaa accaaaaatg atagggggaa ttggaggttt tatcaaagta 181 agacagtatg atcagatact tatagaaatt tgtggaaaaa aggctatagg tacggtatta 241 atagggccta cccctgtcaa cataattgga aggaatatgt tgactcagat tggttgtact 301 ttaaattttc caataagccc tattgaaact gtaccagtaa cattaaagcc aggaatggat 361 ggcccaaagg ttaaacaatg gccattaaca gaagagaaaa taaaagcatt aatagaaatt 421 tgtgaagaga tggaaaagga aggaaaaatt tcaaaaattg ggcctgaaaa tccatacaat 481 actccagtat ttgttataaa gaaaaaagat agcactaagt ggagaaaatt agtagatttc 541 agggagctca ataaaagaac ccaggacttt tgggaagtcc aattaggaat accccatcca 601 gcgggtttaa aaaagaaaaa atcagtaaca gtactggatg tgggggatgc atatttctca 661 gttcctttag atgaaaactt tagaaagtat actgcattca ctataccaag tacaaacaat 721 gagacaccag ggatcagata tcaatacatg gtactccccc agggatggaa aggatcacca 781 tcaatattcc agagtagcat gacaaaaatc ttagagccat tcagattaaa aaatccagaa 841 atagttatct atcaatacat ggatgacttg tatgtaggct ctgatttaga aatagggaaa 901 catagagcaa aaatagagga gttragagct catctattga gctggggatt tactacacca 961 gacaaaaagc atcagaaaga gcctccattt ctttggatgg gatatgaact ccatcctgac 1021 aaatggacag tccagcctat aatgctacca gagaaagaca gctggactgt caatgatata 1081 cagaaattag tgggaaaact aaattgggca agtcagattt atccagggat taaagtaaag 1141 caattgtgta aactcctcag gggagccaaa gcactgacag aaatagtgac actgactgag 1201 gaagcagaat tagaatt //