LOCUS JX290212 1375 bp RNA linear VRL 22-SEP-2012
DEFINITION HIV-1 isolate 10RU6200 from Russia pol protein (pol) gene, partial
cds.
ACCESSION JX290212
VERSION JX290212.1
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Molecular epidemiology of HIV-1 in Novosibirsk region, Russia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1375)
AUTHORS Totmenin,A.V., Baryshev,P.B., Bogatchev,V.V. and Gashnikova,N.M.
TITLE Direct Submission
JOURNAL Submitted (08-JUL-2012) Department of Retroviruses, State Research
Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk
region 630559, Russia
FEATURES Location/Qualifiers
source 1..1375
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="10RU6200"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Russia: Novosibirsk"
/collection_date="2010"
/note="subtype: A1"
gene <1..>1375
/gene="pol"
CDS <1..>1375
/gene="pol"
/codon_start=1
/product="pol protein"
/protein_id="AFR77665.1"
/translation="EARKFSSEQARAISPTSRELWDGGRDDPLPETGTERQGTTSSFN
FPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVR
QYDQILIEICGKKAIGTVLIGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVTLKPGM
DGPKVKQWPLTEEKIKALIDICEEMEKEGKISKIGPENPYNTPVFVIKKKNSTKWRKL
IDLRELNRRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAFYSIPLDESFRKYTAFTI
PSTNNETPGIRYQYNVLPMGWKGSPAIFQSSMTKILEPFRLKNPEIVIYQYVDDLYVG
SDLEIGPHRTKVEELRAHLLNWGFTTPDEKHQKEPPFLWMGYELHPDKWTVQPIMLPD
KDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVTLTEEAELELAEN
REILKEPV"
BASE COUNT 519 a 236 c 305 g 315 t
ORIGIN
1 gaggccagga aattttcctc agagcaggcc agagccatca gccccaccag cagagaactt
61 tgggatgggg gaagagatga ccccctccct gaaacaggaa cagaaagaca ggggacaacg
121 tcctccttca atttccctca aatcactctt tggcaacgac cccttgtcac agtaagaata
181 ggaggacagc taaaagaagc tctattagat acaggagcag atgatacggt attagaagac
241 ataaatttgc caggaaaatg gaaaccaaaa atgatagggg gaattggagg ttttatcaag
301 gtaagacagt atgatcagat acttatagaa atttgtggaa aaaaggctat aggtacagta
361 ttaatagggc ctacccctgt caacataatt ggaagaaata tgttgactca gattggttgt
421 actttaaatt ttccaataag tcctattgaa actgtaccag taacattaaa gccaggaatg
481 gatggcccaa aggttaaaca atggccatta acagaagaga aaataaaagc attaatagac
541 atttgtgagg agatggaaaa ggaaggaaaa atttcaaaaa ttgggcctga aaatccatac
601 aatactccag tatttgttat aaagaaaaag aatagcacta agtggaggaa attaatagat
661 ctcagggagc tcaatagaag aactcaggac ttttgggaag ttcaattagg aataccccat
721 ccggcgggtt taaaaaagaa aaaatcagta acagtactag atgtggggga tgcattttat
781 tcaattcctt tagatgaaag cttcagaaag tatactgcat tcactatacc aagtacaaac
841 aatgagacac cagggatcag atatcaatac aatgtactcc caatgggatg gaaaggatca
901 ccagcaatat tccagagtag catgacaaaa atcttagagc catttagatt aaaaaatcca
961 gaaatagtta tctatcaata cgtggatgac ttgtatgtag gctctgattt agaaataggg
1021 ccacatagaa caaaagtaga ggagttaaga gctcatctat tgaactgggg atttactaca
1081 ccagacgaaa agcatcagaa agagcctcca tttctttgga tgggatatga actccatcct
1141 gataaatgga cagtccagcc tataatgcta ccagataaag acagctggac tgtcaatgat
1201 atacagaaat tagtgggaaa actaaattgg gcaagtcaaa tttatccagg gattaaagta
1261 aggcaactgt gtaaactcct caggggagcc aaagcactga cagatatagt gacactgact
1321 gaggaagcag aattagaatt ggcggagaac agagagattc taaaagaacc tgtgc
//