LOCUS       JX289990                 478 bp    DNA     linear   VRL 15-SEP-2012
DEFINITION  HIV-1 isolate CB1-BR-2 from Australia nef protein (nef) gene,
            partial cds.
ACCESSION   JX289990
VERSION     JX289990.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Gray,L., Cowley,D., Crespan,E., Welsh,C., Mackenzie,C.,
            Wesselingh,S., Gorry,P. and Churchill,M.J.
  TITLE     Reduced basal transcriptional activity of central nervous
            system-derived HIV-1 long terminal repeats
  JOURNAL   AIDS Res. Hum. Retroviruses (2012) In press
   PUBMED   22924643
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Gray,L.R., Cowley,D., Crespan,E., Welsh,C., Mackenzie,C.,
            Wesselingh,S.L., Gorry,P.R. and Churchill,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2012) Centre for Virology, Burnet Institute, 85
            Commercial Road, Melbourne, Victoria 3004, Australia
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Human immunodeficiency virus 1"
                     /proviral
                     /mol_type="genomic DNA"
                     /isolate="CB1-BR-2"
                     /host="Homo sapiens"
                     /db_xref="taxon:11676"
                     /country="Australia"
     repeat_region   <1..>478
                     /note="3' long terminal repeat"
                     /rpt_type=long_terminal_repeat
     gene            <1..332
                     /gene="nef"
     CDS             <1..332
                     /gene="nef"
                     /codon_start=3
                     /product="nef protein"
                     /protein_id="AFR45972.1"
                     /translation="EGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGW
                     CFKLVPVDPDQVEKANEGENNCLLHPMSLHGMDDKEKEVLMWKFDSRLAFHHVARELH
                     PEYYKNW"
BASE COUNT          129 a          112 c          131 g          106 t
ORIGIN      
        1 tggaagggct aatttactcc cagaaaagac aagatatcct tgatctgtgg gtctaccaca
       61 cacaaggtta cttccctgat tggcagaact acacaccagg gccagggatc agatatccac
      121 tgacctttgg atggtgcttc aagctagtcc cagttgaccc agatcaggta gaaaaggcca
      181 atgaaggaga gaacaactgc ttgttacacc ctatgagcct gcatggaatg gatgacaaag
      241 agaaagaagt gttaatgtgg aagtttgaca gccgcctagc atttcatcac gtcgcccgag
      301 agctgcatcc ggagtactat aaaaactggt gacaacgagc tttctacaag ggactttccg
      361 ctggggactt tccaggggag gcgtggcctg ggcgggactg gggagtggtg agccctcaga
      421 tgctggctag ctgggaaccc actgcttaag cctcaataaa gcttgccttg agtgcttc
//