LOCUS JU374146 1341 bp mRNA linear TSA 31-MAY-2012
DEFINITION TSA: Scophthalmus maximus Pmax_rep_c10228 mRNA sequence.
ACCESSION JU374146
VERSION JU374146.1
DBLINK BioProject: PRJNA89091
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Scophthalmus maximus (turbot)
ORGANISM Scophthalmus maximus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
Scophthalmidae; Scophthalmus.
REFERENCE 1 (bases 1 to 1341)
AUTHORS Pereiro,P., Balseiro,P., Romero,A., Dios,S., Forn-Cuni,G.,
Fuste,B., Planas,J.V., Beltran,S., Novoa,B. and Figueras,A.
TITLE High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus)
Transcriptome Using 454-Pyrosequencing for the Discovery of
Antiviral Immune Genes
JOURNAL PLoS ONE 7 (5), E35369 (2012)
PUBMED 22629298
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1341)
AUTHORS Pereiro,P.
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2012) Inmunologia y Genomica, Instituto de
Investigacines Marinas (CSIC), Eduardo Cabello, 6, Vigo, Pontevedra
36208, Spain
COMMENT ##Assembly-Data-START##
Assembly Method :: MIRA V3.2.0
Sequencing Technology :: 454 GS-FLX Titanium
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1341
/organism="Scophthalmus maximus"
/mol_type="mRNA"
/db_xref="taxon:52904"
BASE COUNT 450 a 242 c 234 g 415 t
ORIGIN
1 ccctacgaaa gagtaaattt attgtagaca aaatctatca agtgcgtgtt gtctacttgg
61 gttttttctt ctctcttctc tgacagttag gtatatttct taggcccatg agcattgatg
121 ttctccattt ctctttcttc agatatcctg agtatacagc acaaatcatt tctcaaatca
181 aagcatggaa aacaaatcac gaacagtcct ttcagtgatg aaggccaccg cggagcggcc
241 tcctctccct cccatgttgc ctccagaggt gtgagtccac tccacttatt gaccactgat
301 cagctgttag aaatgtgcat ggcatataca tagaactctt catttatagg ttacaacatc
361 ttcttctttt tttaacagta catgctttgt tggggtagca tttgtaatta gtggatttta
421 acataagaga acaagaatta aaatcaatca ataactgttc aaccaaattg aatgttatgc
481 caatatacca atacgataaa ggggaggaca caagacaaat gaaccctgta ttaatataat
541 accattgaaa ataaggaacg tgtagcgaag attgtgatgt gtaattttgt taagactaac
601 gcaagtttct tcaaatcatg ataaaaaaaa gagctgaata gataagtaga tgcatcatct
661 gaattaaggt ggtttctttg tttgaggtaa aaacattttt taagttgctc ttttgtgaat
721 gtgtcgtttt tcttctacta acgttaatca caaagagttt tcacaggaaa actaggacta
781 aatgaataca taagtttgaa gacaacacac gatttataga ccaaacaaat caattgtgga
841 aaatgtgacg ccttttggat attgaaaata atcattgaag tcctaagtaa catgtatatg
901 ttgtacaata taatgcagtc caatatgaca agtctaaacc aaacggagca gaaagctcta
961 ccctctgtca ttaaaaaaaa taattaaaaa atgaacaagc tttagaaaaa catgattgtc
1021 agaaagagga ctgtactgaa ctgaactgca ttacaatgta caggttcgtt ctgcttgtgt
1081 ccacaccctt ccactctttg tgaaaaactg catgcatttc acctcgtact gtcactaact
1141 agccagtgga ggccagatac caggacgact aatatcataa agcagttttt gaactgttga
1201 actgaaagat ttttccacag tgttggcagc tttaagcagg agttgccaat cctgacaaag
1261 ctctcataat aagaacttgg aattagaaac tatttaggat ataagtattt tactctagta
1321 gatctaattt tccttaaatt t
//