LOCUS JU351609 2264 bp mRNA linear TSA 31-MAY-2012
DEFINITION TSA: Scophthalmus maximus Pmax_c10735 mRNA sequence.
ACCESSION JU351609
VERSION JU351609.1
DBLINK BioProject: PRJNA89091
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Scophthalmus maximus (turbot)
ORGANISM Scophthalmus maximus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
Scophthalmidae; Scophthalmus.
REFERENCE 1 (bases 1 to 2264)
AUTHORS Pereiro,P., Balseiro,P., Romero,A., Dios,S., Forn-Cuni,G.,
Fuste,B., Planas,J.V., Beltran,S., Novoa,B. and Figueras,A.
TITLE High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus)
Transcriptome Using 454-Pyrosequencing for the Discovery of
Antiviral Immune Genes
JOURNAL PLoS ONE 7 (5), E35369 (2012)
PUBMED 22629298
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2264)
AUTHORS Pereiro,P.
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2012) Inmunologia y Genomica, Instituto de
Investigacines Marinas (CSIC), Eduardo Cabello, 6, Vigo, Pontevedra
36208, Spain
COMMENT ##Assembly-Data-START##
Assembly Method :: MIRA V3.2.0
Sequencing Technology :: 454 GS-FLX Titanium
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2264
/organism="Scophthalmus maximus"
/mol_type="mRNA"
/db_xref="taxon:52904"
BASE COUNT 665 a 446 c 470 g 678 t
ORIGIN
1 cccttttttg tttdctttta ttccaagtgg acaaagtgga taagaacaca taaatagcaa
61 caccctgaca aacagagtgg gagagtgaca cctgggaaca acatgtttca tttatacatt
121 ataacgcttc ttttgaagca atatttccta cttctttcag tttcagaatc acaactcggg
181 tcagtgtcca tttgaagttt tggggaaaag ggacagctaa agtgcattca ggtgccggct
241 ctgctgggtt cttgtgactg ccaggtcaga tgggcgaggc tggtgtccga ctccagactc
301 ttgacaggca gccatttctg ccgggcctgt tgatcaccac gttttcacat ccagacacat
361 gtgcagggag ctatgcaggt aacaaagtcg cagcttcacc cagccaatga tttctcaacc
421 tcttacagcc acggggagat gacgggtggc tctcgggcta ttttctacaa tcatccattt
481 tgtgttgaag tagtcaactc caaaaccttt catcgcggta aatgatgcat cacgcgtgtg
541 acttaataac aatcaaaaca tagactacaa ctgaaaaaga aaatatgagt gcaactgatg
601 gttgacaaat gacgcagtat taaatgaact tgacggacaa taatagccag ctcccaaagc
661 atgagcacag aatcgttgtc aacagcagtg gtaggttatg gggtgcaaac taatgtaagc
721 gaaattaatg taagctcaca tgaacaaact gcaccgcaga cgatcgaaat gggttttaaa
781 atcagttcca acaggagagc aataacatgt aagctagtga gtaaactgcc aagtaggcgt
841 ctcaatgcgt cttcttattt tatcaaaata wttcgaatta aagcagcatt ttagyccttt
901 tattcatgga aagctaacgt acggatgctt atgtttatac atatgacatt tgacaagtgt
961 agctcatttt ctctgatgaa aaaaaacaag agctatagta gaaaaaaaac aatacattga
1021 cattttctca tggcaggata tcaaaaaagg tttctttacc aaaacttggg ctattgtttc
1081 aatactagtg ttgaagatga gccagctgac ggtcctaaat caatgttagc tcacaaggca
1141 accagccact agctagtagc ggattcaatg aaataaaaca gcttatactg ctggagcaca
1201 gtgtataaca cggctttacc aataccacat ttttaaaggc aataataata tcaccggttg
1261 cacgtttaaa aacctgataa catttcaggt gtatggtata gcgatgattt taaattaatc
1321 tgaactattt caaatttctt tggcatctaa gtgacgttgc ttgtttctaa ctggctcttc
1381 accctcgccg ataaatctgt gttaaattgt aatgtgactt tcagttattc tcaacggcaa
1441 aggtcctgtt ctggtacaga gcaagtagca gccttgtgct gaaaacaaca acactgctga
1501 cttcatgtcg gagtaaaaag aaaaacccac tcttctacat tctgaagggc agacaccaaa
1561 aacctgacat ttagcactgg cgcgtttgga cgatggacgt gtgctgctga gaatagtcag
1621 tcattgtaca ccctgtactg tactttatcg gcatgtaaac ttcttgactt gactctctca
1681 ttgtgcgaca cggacaacaa aaatgttgtt actgtactcc tggggtgtga ttggcaagtt
1741 acacgtactc tccttgctgt aataaagcca tttgttttaa taatattttg atttttttgg
1801 agtaatatta ctcctaagta ttgcacttgg ttactttkga ggacgtcaca tggctaaaag
1861 aatgacggca aatcggacaa cgaatcactg atgatcacta tgttccttag caaggtagcg
1921 ttgtgtgtgt gtgcactaca caggcctgtt ctgttcattt tatatacacg tgtggggttt
1981 gtatagttga cgtccccgca ctgttggaca aagtgatgct caattgtgcc gtctctactt
2041 ggaacgagtg tcaaactgtc ctatgcctgt cctatccttt atctattgta ggtcattgtt
2101 gtttaattkt cagaagtttt accctctttg tttctagatt gtcctggtaa ggctataggg
2161 aggtgttttc aatcgggatg taaagtgcct gtctgtgtct acagagaagg aatgtattct
2221 atataaggta catacattta tattttaaag ctatttattt gtaa
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