LOCUS       JO316724                 799 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c58890_c mRNA sequence.
ACCESSION   JO316724
VERSION     JO316724.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          187 a          194 c          208 g          210 t
ORIGIN      
        1 ccggagctct cattgttttt gaagacaaca ttgatttctg ccgaacccgt ttccgaggga
       61 acacggtcgt tacggcgaca gggagaaagg tcgttcaaca cgtctggatc ggtatgcaag
      121 atcccgacga cggaaccgta accttctgcc caagacgccc gtcgaccggg atcgtcctcg
      181 ctcatccttc gttcgcacca agtgtcatcg acacttgcag tcggtgccgg taggtgtgag
      241 ccagcgagga aagaaatcca gctgcattca tgtccactca atttcgctgt attctaaacg
      301 caatttcgta cgcgaatttg cggcgagtcg cgatgaaatc taggggacaa aggagtagta
      361 tgttgttggt ttttcctttt caccattgtt gcttagaact taactcatca gttgttccta
      421 ggaaggaagg aaggaaggaa ggtagagtgt cgtttctgcg gcaaccgtga tattaacaat
      481 cagatggtaa gtggtgctat agatagggcg aggttccact tcgctgcatc cagcacttcc
      541 ggccgtagat ccggctcatc aacggctgca actgctgcat acagcttagc ggaaccttgc
      601 ccattggtag gtcgtgccac gtattagtac tccagattcc agaaggctta gcacgggcgc
      661 atttatatcc cattgaaatt ttatcgcctt ttctaacttc ggggagctac gtatgtgagt
      721 cattccgaca cgtcagatca gtcgtgtgac acgtcattac ttactgtgat gtgggatcgt
      781 gagcgccgga atcctttga
//