LOCUS       JO316485                 531 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c56552_c mRNA sequence.
VERSION     JO316485.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Nitella hyalina"
BASE COUNT          125 a          153 c          126 g          123 t
        1 cccctcgccg ccatcgccaa cgccgttcga gccgtgcgct gtggcacgcc tcgcactact
       61 ttctcatgat cctgctaggc gccgacatgc cttgaatcaa tcttgcacac aagtttctcg
      121 tctcgaatct cgatagacya rttctagatc gcgtaaggag cgtagcagag actggaaaat
      181 acggtcaaaa taggaggaga aggtgccgga aagaatgacg ttggactttc tctcgctgat
      241 gatgcactgc tgcaaagaca gaggagtacg ccaacgtttt gcgtcgtaag atttgaaact
      301 tgaggcaatc caacccgacg aagatcgatc gagactgcaa tcagctccac gcttcgctgt
      361 cagattccag gttctaaatc cctgaagcca ccaatcaaga gtccggcatt cgacagtacg
      421 ctgagttgca cccgatgatc ctcctcgctc ttctccctcg tcgatatggt yccgsgaacg
      481 ctaagatgca cccgatgatc ctcctcgctc ttctccgtgt cgatatggtt g