LOCUS       JO316055                 386 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c54124_c mRNA sequence.
ACCESSION   JO316055
VERSION     JO316055.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          101 a           75 c          107 g          103 t
ORIGIN      
        1 tgcggcagcc atcgccaact tgcttgaagt ttttgttttg tccgtttcga agagcgagag
       61 acaagatgcc gaccgattgc tgtacctgca atccttgcaa gtgcaccaac tgtcagtgct
      121 cgaaaggtgc aaagtaactg gtgtggaatg gtaaaccgga cagtcggagg ggcgactgct
      181 ccgattggtt gaacttgacg gtcatcatgg cgactagcca tgatgacaag ggggaaggaa
      241 tcgagaggag attaacaaga ggttgttcta gatgtccatg cgtgcggcag ataacttttt
      301 tcgtgtatgt catttttgga catttgttct gccgatatca gaaatcatga aaacattatg
      361 tccagtcgtg aaaaagcctt gattag
//