LOCUS       JO315824                 802 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c53338_c mRNA sequence.
ACCESSION   JO315824
VERSION     JO315824.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          219 a          176 c          153 g          254 t
ORIGIN      
        1 cgactcaagc agtggcgacg gcaattcttg tggtagaaaa aaccgaaatc gacgcgttgg
       61 atgtccctgc aaaaccacac cgactgtgct agtggcgttt gacacaaaaa aaatagaagt
      121 gtgcaggtac tacaacagca gcaccaacaa caacagcagc accaacaaca ccagcaccaa
      181 caacaccagc accaacaaca cctgcaccaa caacacctgc cagtgatatt ctgtgcctga
      241 atagatgcac aataacaaaa aaatatgagt ttcgacatgt attcatatcg atcgctccaa
      301 actgtactac ttgtacgatt ggtggtgttc cttgcgctga tgcttgtagt actactagta
      361 cttataattc tggtggtgtt ccttatcttt tttcctggta gtggtcatgg ttgtggcggt
      421 attgtaactg atagtggtga tgatgcttgt cttgctgatc ctgatccttc taattctgat
      481 tatggtggtg gtactcttgc tgctccttgt agtggtttta gtggttatgt ttactttgtt
      541 gttgccaaac gaccacagga tgagagatat ggatatgatg gcaagaaatc acaaggacat
      601 cgtgaaataa acttcaacta catttattca ctctcctttc ttcactctat ttatcttaat
      661 cgttttgctc actttctctc acgattccat ctatatatct tattccgtat ttattcagtt
      721 agctcttttc gcgttttcta tgcactaaaa tatctcttta tactctagtg gcggtagtga
      781 tacacatatt taattaagcg ct
//