LOCUS       JO315650                 840 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c52822_c mRNA sequence.
ACCESSION   JO315650
VERSION     JO315650.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 840)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          199 a          255 c          150 g          236 t
ORIGIN      
        1 ctgcacaagc taccaaccgt ggaatctggt gatggacgct catgcagccg catcgcccac
       61 tattctagct cctttcaacg ggttgccaac ccatttcatc agtagggaca ctcctagacc
      121 ataatcctac tcaaaacttc tattttgtac aaactaccaa ccatagagtc tggtaatgca
      181 cgcttatgcc gtcgcatccc tcgcacttct aactacttcc taaggcacat ttgcctgtcg
      241 ctcattactc tttggttgtt tgccaagctg tgaagtaaga tgatccgaaa aataatatgc
      301 aactcgaaaa atccacaata tcactcgtag tggttcatgc tcgtgaatct ctaggaagta
      361 gaaatatccg aaacaataat atgcaacttg aataatccat ctgcacatta taccaccaaa
      421 tccatcctct ccgcctaatt ggtcctctcg ttttgttctc cccgtgccta tcattttgtt
      481 ctgcccaatc gtgccagttg atggttgcgt gcctcccgtt ttcctctgcc caaccatgcc
      541 cgtcgtttcc tcctgccctt atcacccctt gcgcctgtga tgcggcactg aatgtgccat
      601 cttgcacgtc acctgtcctc ttaattacgg agtttcttgc agccgcgtgg cacacaggcc
      661 tcaagcaatc gaggctagtt tgtcctcaca gcactacgag ggatatcacc accaccacca
      721 ccactgcttc tgttggtatc ccgatggttg ttgcaggcca cttgcttatg gatgtcccaa
      781 agcacaatct ctctgtcatt tgaactcgtc aaaaccaaca tcgatccatc ctgaatcccg
//